RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 F5H697 171 aa14.28□□□□□ -0.12
MTCL1-204ENST00000517554 SNAPINO95295 136 aa14.28□□□□□ -0.12
MTCL1-204ENST00000517554 Q8N3U1 123 aa14.28□□□□□ -0.12
MTCL1-204ENST00000517554 TRAV8-6A0A0B4J262 113 aa14.27□□□□□ -0.12
MTCL1-204ENST00000517554 SMIM17P0DL12 118 aa14.27□□□□□ -0.12
MTCL1-204ENST00000517554 BTF3P20290 206 aaKnown RBP14.27□□□□□ -0.12
MTCL1-204ENST00000517554 RPL23P62829 140 aaKnown RBP14.27□□□□□ -0.12
MTCL1-204ENST00000517554 RPL36AP83881 106 aaKnown RBP14.27□□□□□ -0.12
MTCL1-204ENST00000517554 TMEM241Q24JQ0 296 aa14.27□□□□□ -0.12
MTCL1-204ENST00000517554 LINC01556Q5JQF7 62 aa14.27□□□□□ -0.12
MTCL1-204ENST00000517554 RPL36ALQ969Q0 106 aaKnown RBP14.27□□□□□ -0.12
MTCL1-204ENST00000517554 DYNC1H1Q14204 4646 aaKnown RBP14.26□□□□□ -0.13
MTCL1-204ENST00000517554 FAM74A3Q4VXF1 159 aa14.26□□□□□ -0.13
MTCL1-204ENST00000517554 CT83Q5H943 113 aa14.26□□□□□ -0.13
MTCL1-204ENST00000517554 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.26□□□□□ -0.13
MTCL1-204ENST00000517554 ISOC2Q96AB3 205 aa14.26□□□□□ -0.13
MTCL1-204ENST00000517554 OSTCQ9NRP0 149 aa14.26□□□□□ -0.13
MTCL1-204ENST00000517554 M0QY20 66 aa14.26□□□□□ -0.13
MTCL1-204ENST00000517554 FOXA3P55318 350 aaPredicted RBP14.26□□□□□ -0.13
MTCL1-204ENST00000517554 A8MWL6 223 aa14.25□□□□□ -0.13
MTCL1-204ENST00000517554 MGPP08493 103 aa14.25□□□□□ -0.13
MTCL1-204ENST00000517554 TWIST1Q15672 202 aa14.25□□□□□ -0.13
MTCL1-204ENST00000517554 SUMO4Q6EEV6 95 aa14.25□□□□□ -0.13
MTCL1-204ENST00000517554 V9GYV3 84 aa14.25□□□□□ -0.13
MTCL1-204ENST00000517554 TRAV9-2A0A087WT02 112 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 K7EP13 123 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 IGHV3-30P01768 117 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 IGHV3-33P01772 117 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 TRGC1P0CF51 173 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 IGHV3-30-3P0DP02 117 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 IGHV3-30-5P0DP03 117 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 PGLYRP4Q96LB8 373 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 NAT8Q9UHE5 227 aa14.24□□□□□ -0.13
MTCL1-204ENST00000517554 DPH3P1Q9H4G8 78 aa14.23□□□□□ -0.13
MTCL1-204ENST00000517554 A0A087WWC5 75 aa14.22□□□□□ -0.13
MTCL1-204ENST00000517554 CLRN3Q8NCR9 226 aa14.22□□□□□ -0.13
MTCL1-204ENST00000517554 TSKUQ8WUA8 353 aa14.22□□□□□ -0.13
MTCL1-204ENST00000517554 LOC105371267A0A1B0GV96 52 aa14.22□□□□□ -0.13
MTCL1-204ENST00000517554 ADIRFQ15847 76 aa14.22□□□□□ -0.13
MTCL1-204ENST00000517554 HIGD1CA8MV81 97 aa14.2□□□□□ -0.14
MTCL1-204ENST00000517554 IBA57-AS1B1ANH7 110 aa14.2□□□□□ -0.14
MTCL1-204ENST00000517554 C10orf126Q8N4M7 172 aa14.2□□□□□ -0.14
MTCL1-204ENST00000517554 GFRA4Q9GZZ7 299 aa14.2□□□□□ -0.14
MTCL1-204ENST00000517554 NTM-AS1Q6ZSK4 140 aa14.19□□□□□ -0.14
MTCL1-204ENST00000517554 FAM231BA6NCW3 169 aa14.18□□□□□ -0.14
MTCL1-204ENST00000517554 DAZ4Q86SG3 579 aaKnown RBP14.18□□□□□ -0.14
MTCL1-204ENST00000517554 NIT1Q86X76 327 aa14.18□□□□□ -0.14
MTCL1-204ENST00000517554 C15orf54Q8N8G6 183 aa14.18□□□□□ -0.14
MTCL1-204ENST00000517554 DAZ3Q9NR90 486 aaKnown RBP14.18□□□□□ -0.14
MTCL1-204ENST00000517554 TRBV6-8A0A0A6YYG3 113 aa14.17□□□□□ -0.14
MTCL1-204ENST00000517554 RASL11AQ6T310 242 aa14.17□□□□□ -0.14
MTCL1-204ENST00000517554 GATD1Q8NB37 220 aa14.17□□□□□ -0.14
MTCL1-204ENST00000517554 TRAV26-2A0A0B4J265 109 aa14.17□□□□□ -0.14
MTCL1-204ENST00000517554 H7C1H1 209 aa14.17□□□□□ -0.14
MTCL1-204ENST00000517554 NFE4Q86UQ8 179 aa14.17□□□□□ -0.14
MTCL1-204ENST00000517554 DNAJC30Q96LL9 226 aa14.17□□□□□ -0.14
MTCL1-204ENST00000517554 NUP35Q8NFH5 326 aa14.16□□□□□ -0.14
MTCL1-204ENST00000517554 A0A1B0GUT8 65 aa14.15□□□□□ -0.14
MTCL1-204ENST00000517554 CBLN2Q8IUK8 224 aa14.15□□□□□ -0.14
MTCL1-204ENST00000517554 NIT2Q9NQR4 276 aa14.15□□□□□ -0.14
MTCL1-204ENST00000517554 Q9HAA7 133 aa14.14□□□□□ -0.15
MTCL1-204ENST00000517554 KRTAP10-2P60368 255 aa14.13□□□□□ -0.15
MTCL1-204ENST00000517554 KIAA1109Q2LD37 5005 aa14.13□□□□□ -0.15
MTCL1-204ENST00000517554 GAS8-AS1O95177 125 aa14.13□□□□□ -0.15
MTCL1-204ENST00000517554 RHEBQ15382 184 aa14.13□□□□□ -0.15
MTCL1-204ENST00000517554 SMCO4Q9NRQ5 59 aa14.13□□□□□ -0.15
MTCL1-204ENST00000517554 DNAH5Q8TE73 4624 aa14.12□□□□□ -0.15
MTCL1-204ENST00000517554 SMIM27A0A1W2PRY6 76 aa14.12□□□□□ -0.15
MTCL1-204ENST00000517554 LAGE3Q14657 143 aa14.12□□□□□ -0.15
MTCL1-204ENST00000517554 DEFB104AQ8WTQ1 72 aa14.12□□□□□ -0.15
MTCL1-204ENST00000517554 RPL39LQ96EH5 51 aaKnown RBP14.12□□□□□ -0.15
MTCL1-204ENST00000517554 LRP1BQ9NZR2 4599 aa14.11□□□□□ -0.15
MTCL1-204ENST00000517554 C7orf77A4D0Y5 90 aa14.11□□□□□ -0.15
MTCL1-204ENST00000517554 SMIM15Q7Z3B0 74 aa14.11□□□□□ -0.15
MTCL1-204ENST00000517554 SPATA12Q7Z6I5 190 aa14.11□□□□□ -0.15
MTCL1-204ENST00000517554 BORCS7Q96B45 105 aa14.11□□□□□ -0.15
MTCL1-204ENST00000517554 RNF185Q96GF1 192 aa14.11□□□□□ -0.15
MTCL1-204ENST00000517554 TMEM191AQ9H0A3 160 aa14.11□□□□□ -0.15
MTCL1-204ENST00000517554 NAT8BQ9UHF3 227 aa14.1□□□□□ -0.15
MTCL1-204ENST00000517554 A0A087WTM6 91 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 MPV17L2Q567V2 206 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 RPS10P5Q9NQ39 176 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 KLK12Q9UKR0 248 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 A0A087WX48 190 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 IQCJQ1A5X6 159 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 TMEM97Q5BJF2 176 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 FRZBQ92765 325 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 CHCHD5Q9BSY4 110 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 CHCHD7Q9BUK0 85 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 URGCP-MRPS24S4R325 110 aa14.09□□□□□ -0.15
MTCL1-204ENST00000517554 LRCOL1A6NCL2 159 aa14.08□□□□□ -0.16
MTCL1-204ENST00000517554 COLCA2A8K830 154 aa14.08□□□□□ -0.16
MTCL1-204ENST00000517554 TMEM262E9PQX1 116 aa14.08□□□□□ -0.16
MTCL1-204ENST00000517554 RAB4AP20338 218 aa14.08□□□□□ -0.16
MTCL1-204ENST00000517554 FUSP35637 526 aaKnown RBP eCLIP14.08□□□□□ -0.16
MTCL1-204ENST00000517554 AMN1Q8IY45 258 aa14.08□□□□□ -0.16
MTCL1-204ENST00000517554 RIGQ13278 110 aa14.07□□□□□ -0.16
MTCL1-204ENST00000517554 Q8N976 141 aa14.07□□□□□ -0.16
MTCL1-204ENST00000517554 TRBV25-1A0A075B6N4 114 aa14.06□□□□□ -0.16
MTCL1-204ENST00000517554 TRAV8-3A0A0A6YYJ7 113 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms