RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 SYNJ2BPP57105 145 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 LINC00158P58513 81 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 S100A7L2Q5SY68 101 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 ZNF625Q96I27 306 aaPredicted RBP5.03□□□□□ -1.6
CPNE3-203ENST00000517490 PRO0461Q9UI25 63 aa5.03□□□□□ -1.6
CPNE3-203ENST00000517490 TRAV13-1A0A0B4J241 112 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 TRBV27A0A0K0K1C4 114 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 TEX49A0A1B0GTD5 131 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 CLPSL1A2RUU4 121 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 INSP01308 110 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 ZNF22P17026 224 aaPredicted RBP5.02□□□□□ -1.61
CPNE3-203ENST00000517490 MIAQ16674 131 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 PRR9Q5T870 116 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 NFE4Q86UQ8 179 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 OPRPNQ99935 248 aaPredicted RBP5.02□□□□□ -1.61
CPNE3-203ENST00000517490 POLR2KP53803 58 aaKnown RBP5.02□□□□□ -1.61
CPNE3-203ENST00000517490 RNASE13Q5GAN3 156 aaKnown RBP5.02□□□□□ -1.61
CPNE3-203ENST00000517490 AJUBAQ96IF1 538 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 CDIP1Q9H305 208 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 TRAV13-2A0A0B4J235 113 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 F5H768 121 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 J3QL48 77 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 Q6Q795 121 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 IGIPA6NJ69 53 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 BAALC-AS2P0C853 105 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 DEFB131AP59861 70 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 Q6ZS46 218 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 U3KQE9 123 aa5.02□□□□□ -1.61
CPNE3-203ENST00000517490 RNASE3P12724 160 aaKnown RBP5.01□□□□□ -1.61
CPNE3-203ENST00000517490 TMEM263Q8WUH6 116 aaKnown RBP5.01□□□□□ -1.61
CPNE3-203ENST00000517490 CLEC2BQ92478 149 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 DNAJC30Q96LL9 226 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 ODF3Q96PU9 254 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 RAI1Q7Z5J4 1906 aaPredicted RBP5.01□□□□□ -1.61
CPNE3-203ENST00000517490 FAM236AA0A1B0GUQ0 79 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 FAM236BA0A1B0GV22 79 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 LINC01548A6NM66 108 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 RNF223E7ERA6 249 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 C6orf226Q5I0X4 101 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 Q8NA96 180 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 Q9H8V8 135 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 IGHV3-16A0A0C4DH30 117 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 B4DSR2 109 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 M0QXV9 152 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 HIST2H2BCQ6DN03 193 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 HIST2H2BDQ6DRA6 164 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 AKAP6Q13023 2319 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 IGLV4-69A0A075B6H9 119 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 TRGV1A0A0A0MS02 117 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 A0A0J9YX75 114 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 TRBV12-3P01733 135 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 TMEM86BQ8N661 226 aa5.01□□□□□ -1.61
CPNE3-203ENST00000517490 TRGV2A0A075B6R0 118 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5□□□□□ -1.61
CPNE3-203ENST00000517490 IGHV3-38A0A0C4DH36 116 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 IGKV2-29A2NJV5 120 aaPredicted RBP5□□□□□ -1.61
CPNE3-203ENST00000517490 ATP5G1P05496 136 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 RNASE1P07998 156 aaKnown RBP5□□□□□ -1.61
CPNE3-203ENST00000517490 PCSK5Q92824 1860 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 IGLV4-3A0A075B6K6 122 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 TRAV4A0A0B4J268 109 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 TINCRA0A1B0GVN0 87 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 PAX4O43316 350 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 SHISA2Q6UWI4 295 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 LRRC75A-AS1Q8N1F1 130 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 ZNRF2Q8NHG8 242 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 M0QY20 66 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 NDUFC2O95298 119 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 IGHG2P01859 326 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 LINC00643Q86TS7 51 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 GPHB5Q86YW7 130 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 ANKHD1Q8IWZ3 2542 aaKnown RBP5□□□□□ -1.61
CPNE3-203ENST00000517490 SOCS3O14543 225 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 COX6B1P14854 86 aa5□□□□□ -1.61
CPNE3-203ENST00000517490 RIF1Q5UIP0 2472 aaKnown RBP4.99□□□□□ -1.61
CPNE3-203ENST00000517490 LYRM9A8MSI8 78 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 TRACP01848 142 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 MSMBP08118 114 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 Q6ZQT7 251 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 DSCR9P59020 149 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 PYGO1Q9Y3Y4 419 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 CSDC2Q9Y534 153 aaKnown RBP4.99□□□□□ -1.61
CPNE3-203ENST00000517490 CHD9Q3L8U1 2897 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 MED13LQ71F56 2210 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 GATA3P23771 443 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 SMCPP49901 116 aaPredicted RBP4.99□□□□□ -1.61
CPNE3-203ENST00000517490 HIST1H4AP62805 103 aaKnown RBP4.99□□□□□ -1.61
CPNE3-203ENST00000517490 TNP2Q05952 138 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 SPTBN2O15020 2390 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 CACNA1BQ00975 2339 aa4.99□□□□□ -1.61
CPNE3-203ENST00000517490 ATOX1O00244 68 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 VSIG2Q96IQ7 327 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 KLLNB2CW77 178 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 CHCHD5Q9BSY4 110 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 DSCAML1Q8TD84 2053 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 CCDC179H3BU77 68 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 IMUPQ9GZP8 106 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 C5orf42Q9H799 3197 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 TRGV4A0A0C4DH28 118 aa4.98□□□□□ -1.61
CPNE3-203ENST00000517490 FAM240AA0A1B0GVK7 77 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms