RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 DAZAP1Q96EP5 407 aaKnown RBP9.97□□□□□ -0.81
HMGCLL1-209ENST00000515546 A0A087WTM6 91 aa9.96□□□□□ -0.82
HMGCLL1-209ENST00000515546 A0A087WWC5 75 aa9.96□□□□□ -0.82
HMGCLL1-209ENST00000515546 GATCO43716 136 aaKnown RBP9.96□□□□□ -0.82
HMGCLL1-209ENST00000515546 ATP6V1G1O75348 118 aa9.96□□□□□ -0.82
HMGCLL1-209ENST00000515546 LAGE3Q14657 143 aa9.96□□□□□ -0.82
HMGCLL1-209ENST00000515546 CLRN3Q8NCR9 226 aa9.96□□□□□ -0.82
HMGCLL1-209ENST00000515546 OR10G8Q8NGN5 311 aa9.96□□□□□ -0.82
HMGCLL1-209ENST00000515546 IGLC6P0CF74 106 aa9.95□□□□□ -0.82
HMGCLL1-209ENST00000515546 C15orf54Q8N8G6 183 aa9.95□□□□□ -0.82
HMGCLL1-209ENST00000515546 C7orf77A4D0Y5 90 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 EREGO14944 169 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 IGHV3-33P01772 117 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 IGHV3-30-3P0DP02 117 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 RAB4BP61018 213 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 UBE2D3P61077 147 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 UBE2D2P62837 147 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 CT83Q5H943 113 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 SPANXN1Q5VSR9 72 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 CDPF1Q6NVV7 123 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 ATRAIDQ6UW56 229 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 SVBPQ8N300 66 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 Q8N3U1 123 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 GTSF1Q8WW33 167 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 KIF25-AS1Q9Y6Z4 181 aa9.94□□□□□ -0.82
HMGCLL1-209ENST00000515546 MUC21A0A0G2JKD1 596 aa9.93□□□□□ -0.82
HMGCLL1-209ENST00000515546 MUC21A0A140T8X8 626 aa9.93□□□□□ -0.82
HMGCLL1-209ENST00000515546 RPS20P60866 119 aaKnown RBP9.93□□□□□ -0.82
HMGCLL1-209ENST00000515546 AP1S3Q96PC3 154 aa9.93□□□□□ -0.82
HMGCLL1-209ENST00000515546 PGPEP1Q9NXJ5 209 aa9.93□□□□□ -0.82
HMGCLL1-209ENST00000515546 TRBV7-3A0A075B6L6 115 aa9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 LRCOL1A6NCL2 159 aa9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 SNAPINO95295 136 aa9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 MT-ND4LP03901 98 aa9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 RPL36AP83881 106 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 RHEBQ15382 184 aa9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 ZNF56Q15929 161 aa9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 TSKUQ8WUA8 353 aa9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 RPL36ALQ969Q0 106 aaKnown RBP9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 KRTAP17-1Q9BYP8 105 aa9.92□□□□□ -0.82
HMGCLL1-209ENST00000515546 A8MWL6 223 aa9.91□□□□□ -0.82
HMGCLL1-209ENST00000515546 PPP1R2P9O14990 202 aa9.91□□□□□ -0.82
HMGCLL1-209ENST00000515546 NIT1Q86X76 327 aa9.91□□□□□ -0.82
HMGCLL1-209ENST00000515546 FER1L6-AS1Q8NA97 138 aa9.91□□□□□ -0.82
HMGCLL1-209ENST00000515546 NEXN-AS1Q8NBZ9 246 aa9.91□□□□□ -0.82
HMGCLL1-209ENST00000515546 ANAPC16Q96DE5 110 aa9.91□□□□□ -0.82
HMGCLL1-209ENST00000515546 Q9HAA7 133 aa9.91□□□□□ -0.82
HMGCLL1-209ENST00000515546 SMIM27A0A1W2PRY6 76 aa9.9□□□□□ -0.82
HMGCLL1-209ENST00000515546 CTRLP40313 264 aa9.9□□□□□ -0.82
HMGCLL1-209ENST00000515546 RPS10P5Q9NQ39 176 aa9.9□□□□□ -0.82
HMGCLL1-209ENST00000515546 XKRY2A2RUG3 117 aa9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 FUSP35637 526 aaKnown RBP eCLIP9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 CACNG7P62955 275 aa9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 LYZL1Q6UWQ5 148 aa9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 DAZ4Q86SG3 579 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 CHCHD7Q9BUK0 85 aa9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 TPPP3Q9BW30 176 aa9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 CTDSP1Q9GZU7 261 aa9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 GFRA4Q9GZZ7 299 aa9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 DAZ3Q9NR90 486 aaKnown RBP9.89□□□□□ -0.83
HMGCLL1-209ENST00000515546 FAM231BA6NCW3 169 aa9.88□□□□□ -0.83
HMGCLL1-209ENST00000515546 HIGD1CA8MV81 97 aa9.88□□□□□ -0.83
HMGCLL1-209ENST00000515546 F2Z2F3 143 aa9.88□□□□□ -0.83
HMGCLL1-209ENST00000515546 PSCAO43653 123 aa9.88□□□□□ -0.83
HMGCLL1-209ENST00000515546 FOXA3P55318 350 aaPredicted RBP9.88□□□□□ -0.83
HMGCLL1-209ENST00000515546 NUP35Q8NFH5 326 aa9.88□□□□□ -0.83
HMGCLL1-209ENST00000515546 PGLYRP4Q96LB8 373 aa9.88□□□□□ -0.83
HMGCLL1-209ENST00000515546 CNFNQ9BYD5 112 aa9.88□□□□□ -0.83
HMGCLL1-209ENST00000515546 TRBV6-8A0A0A6YYG3 113 aa9.87□□□□□ -0.83
HMGCLL1-209ENST00000515546 TRAV8-3A0A0A6YYJ7 113 aa9.87□□□□□ -0.83
HMGCLL1-209ENST00000515546 SMIM17P0DL12 118 aa9.87□□□□□ -0.83
HMGCLL1-209ENST00000515546 SSTP61278 116 aa9.87□□□□□ -0.83
HMGCLL1-209ENST00000515546 TM2D2Q9BX73 214 aa9.87□□□□□ -0.83
HMGCLL1-209ENST00000515546 TMEM242Q9NWH2 141 aa9.87□□□□□ -0.83
HMGCLL1-209ENST00000515546 F5H697 171 aa9.86□□□□□ -0.83
HMGCLL1-209ENST00000515546 WDR73Q6P4I2 378 aa9.86□□□□□ -0.83
HMGCLL1-209ENST00000515546 Q8N814 137 aa9.86□□□□□ -0.83
HMGCLL1-209ENST00000515546 NTN5Q8WTR8 489 aaPredicted RBP9.86□□□□□ -0.83
HMGCLL1-209ENST00000515546 KRTAP4-5Q9BYR2 181 aa9.86□□□□□ -0.83
HMGCLL1-209ENST00000515546 NAT8BQ9UHF3 227 aa9.86□□□□□ -0.83
HMGCLL1-209ENST00000515546 URGCP-MRPS24S4R325 110 aa9.86□□□□□ -0.83
HMGCLL1-209ENST00000515546 M0QY20 66 aa9.85□□□□□ -0.83
HMGCLL1-209ENST00000515546 S100A1P23297 94 aa9.85□□□□□ -0.83
HMGCLL1-209ENST00000515546 MAPKAPK5-AS1Q8N8E1 139 aa9.85□□□□□ -0.83
HMGCLL1-209ENST00000515546 IMMP2LQ96T52 175 aa9.85□□□□□ -0.83
HMGCLL1-209ENST00000515546 TRGC1P0CF51 173 aa9.84□□□□□ -0.83
HMGCLL1-209ENST00000515546 KRTAP10-1P60331 282 aa9.84□□□□□ -0.83
HMGCLL1-209ENST00000515546 SUMO4Q6EEV6 95 aa9.84□□□□□ -0.83
HMGCLL1-209ENST00000515546 CBLN2Q8IUK8 224 aa9.84□□□□□ -0.83
HMGCLL1-209ENST00000515546 A0A087WX48 190 aa9.83□□□□□ -0.84
HMGCLL1-209ENST00000515546 H7C1H1 209 aa9.83□□□□□ -0.84
HMGCLL1-209ENST00000515546 SCO1O75880 301 aa9.83□□□□□ -0.84
HMGCLL1-209ENST00000515546 MGPP08493 103 aa9.83□□□□□ -0.84
HMGCLL1-209ENST00000515546 WFDC2Q14508 124 aa9.83□□□□□ -0.84
HMGCLL1-209ENST00000515546 TMEM97Q5BJF2 176 aa9.83□□□□□ -0.84
HMGCLL1-209ENST00000515546 NTM-AS1Q6ZSK4 140 aa9.83□□□□□ -0.84
HMGCLL1-209ENST00000515546 Q8N1X5 172 aa9.83□□□□□ -0.84
HMGCLL1-209ENST00000515546 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms