RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 NTF3P20783 257 aa7.66□□□□□ -1.18
VCAN-212ENST00000515397 KRTAP10-1P60331 282 aa7.66□□□□□ -1.18
VCAN-212ENST00000515397 OR10G8Q8NGN5 311 aa7.66□□□□□ -1.18
VCAN-212ENST00000515397 AP1S3Q96PC3 154 aa7.66□□□□□ -1.18
VCAN-212ENST00000515397 EIF5A2Q9GZV4 153 aaKnown RBP7.66□□□□□ -1.18
VCAN-212ENST00000515397 XKRY2A2RUG3 117 aa7.65□□□□□ -1.18
VCAN-212ENST00000515397 TAGLN2P37802 199 aaKnown RBP7.65□□□□□ -1.18
VCAN-212ENST00000515397 FOXA3P55318 350 aaPredicted RBP7.65□□□□□ -1.18
VCAN-212ENST00000515397 HAMPP81172 84 aa7.65□□□□□ -1.18
VCAN-212ENST00000515397 SUMO4Q6EEV6 95 aa7.65□□□□□ -1.18
VCAN-212ENST00000515397 NTM-AS1Q6ZSK4 140 aa7.65□□□□□ -1.18
VCAN-212ENST00000515397 MAPKAPK5-AS1Q8N8E1 139 aa7.65□□□□□ -1.18
VCAN-212ENST00000515397 SMIM12Q96EX1 92 aa7.65□□□□□ -1.18
VCAN-212ENST00000515397 RPP21Q9H633 154 aaKnown RBP7.65□□□□□ -1.18
VCAN-212ENST00000515397 BIN3Q9NQY0 253 aa7.65□□□□□ -1.18
VCAN-212ENST00000515397 URGCP-MRPS24S4R325 110 aa7.65□□□□□ -1.18
VCAN-212ENST00000515397 A0A087WX48 190 aa7.64□□□□□ -1.19
VCAN-212ENST00000515397 TRBV6-8A0A0A6YYG3 113 aa7.64□□□□□ -1.19
VCAN-212ENST00000515397 M0QY20 66 aa7.64□□□□□ -1.19
VCAN-212ENST00000515397 CDK2AP2O75956 126 aa7.64□□□□□ -1.19
VCAN-212ENST00000515397 CACNG7P62955 275 aa7.64□□□□□ -1.19
VCAN-212ENST00000515397 TWIST1Q15672 202 aa7.64□□□□□ -1.19
VCAN-212ENST00000515397 BAALCQ8WXS3 180 aa7.64□□□□□ -1.19
VCAN-212ENST00000515397 UBE2WQ96B02 151 aa7.64□□□□□ -1.19
VCAN-212ENST00000515397 F2Z2F3 143 aa7.63□□□□□ -1.19
VCAN-212ENST00000515397 TMEM250H0YL14 139 aa7.63□□□□□ -1.19
VCAN-212ENST00000515397 GATCO43716 136 aaKnown RBP7.63□□□□□ -1.19
VCAN-212ENST00000515397 Q8N976 141 aa7.63□□□□□ -1.19
VCAN-212ENST00000515397 GTSF1Q8WW33 167 aa7.63□□□□□ -1.19
VCAN-212ENST00000515397 PGLYRP4Q96LB8 373 aa7.63□□□□□ -1.19
VCAN-212ENST00000515397 CHCHD5Q9BSY4 110 aa7.63□□□□□ -1.19
VCAN-212ENST00000515397 IGKV2D-24A0A075B6R9 120 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 TRAV8-3A0A0A6YYJ7 113 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 TRAV26-2A0A0B4J265 109 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 SRP19P09132 144 aaKnown RBP7.62□□□□□ -1.19
VCAN-212ENST00000515397 GAGE6Q13070 117 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 LAGE3Q14657 143 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 MPV17L2Q567V2 206 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 Q8N814 137 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 C15orf54Q8N8G6 183 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 FAM210AQ96ND0 272 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 SMIM7Q9BQ49 75 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 TM2D2Q9BX73 214 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 ABCA13Q86UQ4 5058 aa7.62□□□□□ -1.19
VCAN-212ENST00000515397 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.61□□□□□ -1.19
VCAN-212ENST00000515397 IGLV5-52A0A0A0MRZ9 124 aa7.61□□□□□ -1.19
VCAN-212ENST00000515397 C9JQL5 133 aa7.61□□□□□ -1.19
VCAN-212ENST00000515397 GCSHP23434 173 aa7.61□□□□□ -1.19
VCAN-212ENST00000515397 CTRLP40313 264 aa7.61□□□□□ -1.19
VCAN-212ENST00000515397 XGP55808 180 aa7.61□□□□□ -1.19
VCAN-212ENST00000515397 SRSF3P84103 164 aaKnown RBP7.61□□□□□ -1.19
VCAN-212ENST00000515397 KCNIP4Q6PIL6 250 aa7.61□□□□□ -1.19
VCAN-212ENST00000515397 DPH3P1Q9H4G8 78 aa7.61□□□□□ -1.19
VCAN-212ENST00000515397 ZNF727A8MUV8 499 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 ANGP03950 147 aaKnown RBP7.6□□□□□ -1.19
VCAN-212ENST00000515397 TRGC1P0CF51 173 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 LINC01620Q4KN68 170 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 CDPF1Q6NVV7 123 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 RASL11AQ6T310 242 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 ATRAIDQ6UW56 229 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 CLPSL2Q6UWE3 100 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 ENHOQ6UWT2 76 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.6□□□□□ -1.19
VCAN-212ENST00000515397 GATD1Q8NB37 220 aa7.6□□□□□ -1.19
VCAN-212ENST00000515397 SMR3BP02814 79 aaPredicted RBP7.59□□□□□ -1.19
VCAN-212ENST00000515397 WDR73Q6P4I2 378 aa7.59□□□□□ -1.19
VCAN-212ENST00000515397 LINC01551Q86U37 167 aa7.59□□□□□ -1.19
VCAN-212ENST00000515397 RPL39LQ96EH5 51 aaKnown RBP7.59□□□□□ -1.19
VCAN-212ENST00000515397 A8MWL6 223 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 H7C1H1 209 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 GAS8-AS1O95177 125 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 RBX1P62877 108 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 TEX261Q6UWH6 196 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 FAM231DQ6ZW35 169 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 Q8N1X5 172 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 CNFNQ9BYD5 112 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 NIT2Q9NQR4 276 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 FAM30AQ9NZY2 134 aa7.58□□□□□ -1.2
VCAN-212ENST00000515397 TRBV25-1A0A075B6N4 114 aa7.57□□□□□ -1.2
VCAN-212ENST00000515397 IGHV1-24A0A0C4DH33 117 aa7.57□□□□□ -1.2
VCAN-212ENST00000515397 ELOBQ15370 118 aa7.57□□□□□ -1.2
VCAN-212ENST00000515397 LINC00269Q8N2A0 174 aa7.57□□□□□ -1.2
VCAN-212ENST00000515397 CRPP02741 224 aa7.56□□□□□ -1.2
VCAN-212ENST00000515397 TMEM241Q24JQ0 296 aa7.56□□□□□ -1.2
VCAN-212ENST00000515397 RMI2Q96E14 147 aa7.56□□□□□ -1.2
VCAN-212ENST00000515397 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
VCAN-212ENST00000515397 GFRA4Q9GZZ7 299 aa7.56□□□□□ -1.2
VCAN-212ENST00000515397 FAT1Q14517 4588 aa7.56□□□□□ -1.2
VCAN-212ENST00000515397 IGLV4-60A0A075B6I1 120 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 IGLV10-54A0A075B6I4 117 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 HIGD1CA8MV81 97 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 RPL23P62829 140 aaKnown RBP7.55□□□□□ -1.2
VCAN-212ENST00000515397 ADIRFQ15847 76 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 IQCJQ1A5X6 159 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 TMEM97Q5BJF2 176 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 SMIM15Q7Z3B0 74 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 NTN5Q8WTR8 489 aaPredicted RBP7.55□□□□□ -1.2
VCAN-212ENST00000515397 TSKUQ8WUA8 353 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 TMEM243Q9BU79 118 aa7.55□□□□□ -1.2
VCAN-212ENST00000515397 C1orf43Q9BWL3 253 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 166.3 ms