RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 RPP21Q9H633 154 aaKnown RBP10.99□□□□□ -0.65
DDX41-213ENST00000512027 BIN3Q9NQY0 253 aa10.99□□□□□ -0.65
DDX41-213ENST00000512027 XKRY2A2RUG3 117 aa10.98□□□□□ -0.65
DDX41-213ENST00000512027 TMEM250H0YL14 139 aa10.98□□□□□ -0.65
DDX41-213ENST00000512027 CACNG7P62955 275 aa10.98□□□□□ -0.65
DDX41-213ENST00000512027 WFDC2Q14508 124 aa10.98□□□□□ -0.65
DDX41-213ENST00000512027 MAPKAPK5-AS1Q8N8E1 139 aa10.98□□□□□ -0.65
DDX41-213ENST00000512027 PGPEP1Q9NXJ5 209 aa10.98□□□□□ -0.65
DDX41-213ENST00000512027 KLK12Q9UKR0 248 aa10.98□□□□□ -0.65
DDX41-213ENST00000512027 TRBV6-8A0A0A6YYG3 113 aa10.97□□□□□ -0.65
DDX41-213ENST00000512027 NTF3P20783 257 aa10.97□□□□□ -0.65
DDX41-213ENST00000512027 CTRLP40313 264 aa10.97□□□□□ -0.65
DDX41-213ENST00000512027 KRTAP10-1P60331 282 aa10.97□□□□□ -0.65
DDX41-213ENST00000512027 SUMO4Q6EEV6 95 aa10.97□□□□□ -0.65
DDX41-213ENST00000512027 EIF5A2Q9GZV4 153 aaKnown RBP10.97□□□□□ -0.65
DDX41-213ENST00000512027 URGCP-MRPS24S4R325 110 aa10.97□□□□□ -0.65
DDX41-213ENST00000512027 LECT2O14960 151 aa10.96□□□□□ -0.65
DDX41-213ENST00000512027 CDPF1Q6NVV7 123 aa10.96□□□□□ -0.65
DDX41-213ENST00000512027 NTM-AS1Q6ZSK4 140 aa10.96□□□□□ -0.65
DDX41-213ENST00000512027 FAM210AQ96ND0 272 aa10.96□□□□□ -0.65
DDX41-213ENST00000512027 A0A087WX48 190 aa10.95□□□□□ -0.66
DDX41-213ENST00000512027 F2Z2F3 143 aa10.95□□□□□ -0.66
DDX41-213ENST00000512027 M0QY20 66 aa10.95□□□□□ -0.66
DDX41-213ENST00000512027 Q8N814 137 aa10.95□□□□□ -0.66
DDX41-213ENST00000512027 DEFB104AQ8WTQ1 72 aa10.95□□□□□ -0.66
DDX41-213ENST00000512027 GTSF1Q8WW33 167 aa10.95□□□□□ -0.66
DDX41-213ENST00000512027 TRAV8-3A0A0A6YYJ7 113 aa10.94□□□□□ -0.66
DDX41-213ENST00000512027 TMEM262E9PQX1 116 aa10.94□□□□□ -0.66
DDX41-213ENST00000512027 GATCO43716 136 aaKnown RBP10.94□□□□□ -0.66
DDX41-213ENST00000512027 MPV17L2Q567V2 206 aa10.94□□□□□ -0.66
DDX41-213ENST00000512027 UBE2WQ96B02 151 aa10.94□□□□□ -0.66
DDX41-213ENST00000512027 DPH3P1Q9H4G8 78 aa10.94□□□□□ -0.66
DDX41-213ENST00000512027 IGLV5-52A0A0A0MRZ9 124 aa10.93□□□□□ -0.66
DDX41-213ENST00000512027 SRP19P09132 144 aaKnown RBP10.93□□□□□ -0.66
DDX41-213ENST00000512027 TRGC1P0CF51 173 aa10.93□□□□□ -0.66
DDX41-213ENST00000512027 TWIST1Q15672 202 aa10.93□□□□□ -0.66
DDX41-213ENST00000512027 SMIM7Q9BQ49 75 aa10.93□□□□□ -0.66
DDX41-213ENST00000512027 CHCHD5Q9BSY4 110 aa10.93□□□□□ -0.66
DDX41-213ENST00000512027 TM2D2Q9BX73 214 aa10.93□□□□□ -0.66
DDX41-213ENST00000512027 DNAH8Q96JB1 4490 aa10.93□□□□□ -0.66
DDX41-213ENST00000512027 IGKV2D-24A0A075B6R9 120 aa10.92□□□□□ -0.66
DDX41-213ENST00000512027 FOXA3P55318 350 aaPredicted RBP10.92□□□□□ -0.66
DDX41-213ENST00000512027 C15orf54Q8N8G6 183 aa10.92□□□□□ -0.66
DDX41-213ENST00000512027 Q8N976 141 aa10.92□□□□□ -0.66
DDX41-213ENST00000512027 BAALCQ8WXS3 180 aa10.92□□□□□ -0.66
DDX41-213ENST00000512027 CNFNQ9BYD5 112 aa10.92□□□□□ -0.66
DDX41-213ENST00000512027 TRAV26-2A0A0B4J265 109 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 H7C1H1 209 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 GCSHP23434 173 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 HAMPP81172 84 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 GAGE6Q13070 117 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 KCNIP4Q6PIL6 250 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 RASL11AQ6T310 242 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 FAM231DQ6ZW35 169 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 PGLYRP4Q96LB8 373 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 CHCHD7Q9BUK0 85 aa10.91□□□□□ -0.66
DDX41-213ENST00000512027 ZNF727A8MUV8 499 aa10.9□□□□□ -0.66
DDX41-213ENST00000512027 XGP55808 180 aa10.9□□□□□ -0.66
DDX41-213ENST00000512027 WDR73Q6P4I2 378 aa10.9□□□□□ -0.66
DDX41-213ENST00000512027 ENHOQ6UWT2 76 aa10.9□□□□□ -0.66
DDX41-213ENST00000512027 LINC01551Q86U37 167 aa10.9□□□□□ -0.66
DDX41-213ENST00000512027 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.9□□□□□ -0.66
DDX41-213ENST00000512027 FAT1Q14517 4588 aa10.89□□□□□ -0.67
DDX41-213ENST00000512027 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.89□□□□□ -0.67
DDX41-213ENST00000512027 C9JQL5 133 aa10.89□□□□□ -0.67
DDX41-213ENST00000512027 ANGP03950 147 aaKnown RBP10.89□□□□□ -0.67
DDX41-213ENST00000512027 SRSF3P84103 164 aaKnown RBP10.89□□□□□ -0.67
DDX41-213ENST00000512027 ATRAIDQ6UW56 229 aa10.89□□□□□ -0.67
DDX41-213ENST00000512027 CLPSL2Q6UWE3 100 aa10.89□□□□□ -0.67
DDX41-213ENST00000512027 Q8N1X5 172 aa10.89□□□□□ -0.67
DDX41-213ENST00000512027 TRBV25-1A0A075B6N4 114 aa10.88□□□□□ -0.67
DDX41-213ENST00000512027 ELOBQ15370 118 aa10.88□□□□□ -0.67
DDX41-213ENST00000512027 TEX261Q6UWH6 196 aa10.88□□□□□ -0.67
DDX41-213ENST00000512027 GATD1Q8NB37 220 aa10.88□□□□□ -0.67
DDX41-213ENST00000512027 NTN5Q8WTR8 489 aaPredicted RBP10.88□□□□□ -0.67
DDX41-213ENST00000512027 RMI2Q96E14 147 aa10.88□□□□□ -0.67
DDX41-213ENST00000512027 NIT2Q9NQR4 276 aa10.88□□□□□ -0.67
DDX41-213ENST00000512027 IGHV1-24A0A0C4DH33 117 aa10.87□□□□□ -0.67
DDX41-213ENST00000512027 A8MWL6 223 aa10.87□□□□□ -0.67
DDX41-213ENST00000512027 RBX1P62877 108 aa10.87□□□□□ -0.67
DDX41-213ENST00000512027 IQCJQ1A5X6 159 aa10.87□□□□□ -0.67
DDX41-213ENST00000512027 TMEM97Q5BJF2 176 aa10.87□□□□□ -0.67
DDX41-213ENST00000512027 RPL39LQ96EH5 51 aaKnown RBP10.87□□□□□ -0.67
DDX41-213ENST00000512027 CRPP02741 224 aa10.86□□□□□ -0.67
DDX41-213ENST00000512027 COX11Q9Y6N1 276 aa10.86□□□□□ -0.67
DDX41-213ENST00000512027 NDUFS6O75380 124 aaKnown RBP10.85□□□□□ -0.67
DDX41-213ENST00000512027 LINC01620Q4KN68 170 aa10.85□□□□□ -0.67
DDX41-213ENST00000512027 CT83Q5H943 113 aa10.85□□□□□ -0.67
DDX41-213ENST00000512027 HIGD1CA8MV81 97 aa10.84□□□□□ -0.67
DDX41-213ENST00000512027 Q0VG73 95 aa10.84□□□□□ -0.67
DDX41-213ENST00000512027 LINC00269Q8N2A0 174 aa10.84□□□□□ -0.67
DDX41-213ENST00000512027 TSKUQ8WUA8 353 aa10.84□□□□□ -0.67
DDX41-213ENST00000512027 C1orf43Q9BWL3 253 aa10.84□□□□□ -0.67
DDX41-213ENST00000512027 OSTCQ9NRP0 149 aa10.84□□□□□ -0.67
DDX41-213ENST00000512027 FAM30AQ9NZY2 134 aa10.84□□□□□ -0.67
DDX41-213ENST00000512027 GAS8-AS1O95177 125 aa10.83□□□□□ -0.68
DDX41-213ENST00000512027 HLA-DQA1P01909 254 aa10.83□□□□□ -0.68
DDX41-213ENST00000512027 RPL23P62829 140 aaKnown RBP10.83□□□□□ -0.68
DDX41-213ENST00000512027 SMIM15Q7Z3B0 74 aa10.83□□□□□ -0.68
DDX41-213ENST00000512027 ISOC2Q96AB3 205 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms