RNA–Protein interactions for RNA: ENST00000510852.1

USP53-207, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 2,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-207ENST00000510852 C2orf50Q96LR7 162 aa7.15□□□□□ -1.27
USP53-207ENST00000510852 RNF5Q99942 180 aa7.15□□□□□ -1.27
USP53-207ENST00000510852 TRAV3A0A0B4J244 114 aa7.14□□□□□ -1.27
USP53-207ENST00000510852 FRMD6-AS1P0C7T7 363 aa7.14□□□□□ -1.27
USP53-207ENST00000510852 FP248Q71RG6 208 aaPredicted RBP7.14□□□□□ -1.27
USP53-207ENST00000510852 Q8N6K4 173 aa7.14□□□□□ -1.27
USP53-207ENST00000510852 FAM24AA6NFZ4 105 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 ZNF138P52744 262 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 NMES1Q9C002 83 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 MOB4Q9Y3A3 225 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 H3BUX3 64 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 ZNF253O75346 499 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 HLA-DMBP28068 263 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 ORMDL2Q53FV1 153 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 ZNF329Q86UD4 541 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 Q8N976 141 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 NPBQ8NG41 125 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 NAV3Q8IVL0 2385 aa7.13□□□□□ -1.27
USP53-207ENST00000510852 TRBV27A0A0K0K1C4 114 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 K7EQD1 137 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 NPC2P61916 151 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 CYCSP99999 105 aaKnown RBP7.12□□□□□ -1.27
USP53-207ENST00000510852 TMEM167AQ8TBQ9 72 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 PPDPFLQ8WWR9 84 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 PYGO2Q9BRQ0 406 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 DPH3P1Q9H4G8 78 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 KANTRA0A1W2PQU2 76 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 COX7A2P2O60397 106 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 NDUFA3O95167 84 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 IGHV4-59P01825 116 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 ZNF688P0C7X2 276 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 PMCHL1Q16048 86 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 LY6EQ16553 131 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 Q6YL49 198 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 NOTCH2NLQ7Z3S9 236 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 C18orf32Q8TCD1 76 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 PPP1R1CQ8WVI7 109 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 HIVEP2P31629 2446 aa7.12□□□□□ -1.27
USP53-207ENST00000510852 IGHV3OR16-13A0A075B7E8 117 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 A6NDX4 124 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 ZNF345Q14585 488 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 PLGLAQ15195 96 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 SS18Q15532 418 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 MRGPRG-AS1Q2M3A8 158 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 TMEM243Q9BU79 118 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 UMAD1C9J7I0 102 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 SYS1-DBNDD2H3BUS1 97 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 PHF5AQ7RTV0 110 aaKnown RBP7.11□□□□□ -1.27
USP53-207ENST00000510852 SIGLECL1Q8N7X8 197 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 TMEM14BQ9NUH8 114 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 TMEM242Q9NWH2 141 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 RABAC1Q9UI14 185 aa7.11□□□□□ -1.27
USP53-207ENST00000510852 LINC01545Q5VT33 79 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 Q6ZQT7 251 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 Q8N9W7 124 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 COPS9Q8WXC6 57 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 TAF15Q92804 592 aaKnown RBP eCLIP7.1□□□□□ -1.27
USP53-207ENST00000510852 CUBNO60494 3623 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 TRAV14DV4A0A0A6YYC5 116 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 INAFM1C9JVW0 142 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 SPINK9Q5DT21 86 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 MIC13Q5XKP0 118 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 MSRB1Q9NZV6 116 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 PRO0461Q9UI25 63 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 MTORP42345 2549 aa7.1□□□□□ -1.27
USP53-207ENST00000510852 RPL23P62829 140 aaKnown RBP7.09□□□□□ -1.27
USP53-207ENST00000510852 GNB1P62873 340 aa7.09□□□□□ -1.27
USP53-207ENST00000510852 C10orf55Q5SWW7 151 aa7.09□□□□□ -1.27
USP53-207ENST00000510852 SPATA12Q7Z6I5 190 aa7.09□□□□□ -1.27
USP53-207ENST00000510852 E7EUB6 86 aa7.09□□□□□ -1.27
USP53-207ENST00000510852 SSSCA1O60232 199 aa7.09□□□□□ -1.27
USP53-207ENST00000510852 C5orf56Q8N8D9 126 aa7.09□□□□□ -1.27
USP53-207ENST00000510852 EPDR1Q9UM22 224 aa7.09□□□□□ -1.27
USP53-207ENST00000510852 F8P00451 2351 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 TNCP24821 2201 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 FXYD6-FXYD2A0A087WZ82 144 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 IGHV4-28A0A0C4DH34 117 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 CEBPZOSA8MTT3 80 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 Q8N2B8 174 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 NDUFA4L2Q9NRX3 87 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 LINC00588Q9Y4M8 146 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 TRAV9-2A0A087WT02 112 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 TRBV7-7A0A0K0K1E9 115 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 HLA-DQA1P01909 254 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 CD7P09564 240 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 IAPPP10997 89 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 PRCDQ00LT1 54 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 CMTM2Q8TAZ6 248 aa7.08□□□□□ -1.28
USP53-207ENST00000510852 hADV29S1A0JD25 119 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 RPL27AP46776 148 aaKnown RBP7.07□□□□□ -1.28
USP53-207ENST00000510852 FXYD3Q14802 87 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 GPHB5Q86YW7 130 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.07□□□□□ -1.28
USP53-207ENST00000510852 VSIG2Q96IQ7 327 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 C11orf1Q9H5F2 150 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 IGHV7-81A0A0B4J1V7 117 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 NXPH4O95158 308 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 CSN1S1P47710 185 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 NDPQ00604 133 aa7.07□□□□□ -1.28
USP53-207ENST00000510852 KIAA0087Q14695 138 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms