RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 SLC48A1Q6P1K1 146 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 LYPD6Q86Y78 171 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 C3orf56Q8N813 242 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 CCL4L1Q8NHW4 92 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 MRPS24Q96EL2 167 aaKnown RBP2.24□□□□□ -2.05
NUP54-209ENST00000510569 LINC00467Q9BRT7 94 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 ABRACLQ9P1F3 81 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 MYO9BQ13459 2157 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 KNL1Q8NG31 2342 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 COL27A1Q8IZC6 1860 aaPredicted RBP2.24□□□□□ -2.05
NUP54-209ENST00000510569 HMCN1Q96RW7 5635 aa2.24□□□□□ -2.05
NUP54-209ENST00000510569 MUC6Q6W4X9 2439 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 FREM3P0C091 2139 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 NCOA6Q14686 2063 aaPredicted RBP2.23□□□□□ -2.05
NUP54-209ENST00000510569 IGLV3-9A0A075B6K5 115 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 MUC21A0A0G2JKD1 596 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 HMSDA8MTL9 139 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 SNRPGP15A8MWD9 76 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 LECT2O14960 151 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 SH2D1AO60880 128 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 ZNF737O75373 536 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 SFT2D2O95562 160 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 CFDP00746 253 aaPredicted RBP2.23□□□□□ -2.05
NUP54-209ENST00000510569 HMGN2P05204 90 aaKnown RBP2.23□□□□□ -2.05
NUP54-209ENST00000510569 MSMBP08118 114 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 NMBP08949 121 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 COX7CP15954 63 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 NFYAP23511 347 aaPredicted RBP2.23□□□□□ -2.05
NUP54-209ENST00000510569 CAV3P56539 151 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 BLCAPP62952 87 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 DEFA5Q01523 94 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 KISS1Q15726 138 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 ZNF791Q3KP31 576 aaPredicted RBP2.23□□□□□ -2.05
NUP54-209ENST00000510569 PYDC2Q56P42 97 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 PRR9Q5T870 116 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 LINC01590Q5TEZ4 76 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 MIC13Q5XKP0 118 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 ZNF660Q6AZW8 331 aaPredicted RBP2.23□□□□□ -2.05
NUP54-209ENST00000510569 ALKAL2Q6UX46 152 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 Q6ZR03 302 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 FP248Q71RG6 208 aaPredicted RBP2.23□□□□□ -2.05
NUP54-209ENST00000510569 DYNAPQ8N1N2 210 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 CIRBP-AS1Q8TBR5 109 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 SMCR5Q8TEV8 140 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 DSCR8Q96T75 97 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 ASF1BQ9NVP2 202 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 ZNRD1Q9P1U0 126 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 DSCAMO60469 2012 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 TECTAO75443 2155 aa2.23□□□□□ -2.05
NUP54-209ENST00000510569 KMT2BQ9UMN6 2715 aaPredicted RBP2.23□□□□□ -2.05
NUP54-209ENST00000510569 CFAP54Q96N23 3096 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 WDR87Q6ZQQ6 2873 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 PCDH15Q96QU1 1955 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 IGKV1D-42A0A075B6H8 117 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 TRBV6-7A0A0A0MS04 114 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 IGLC7A0M8Q6 106 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 RBAKDNA6NC62 111 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 NAP1L6A6NFF2 107 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 A6NN06 94 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 ZNF736B4DX44 427 aaPredicted RBP2.22□□□□□ -2.05
NUP54-209ENST00000510569 E7EQL1 145 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 C5orf67F2Z3F1 127 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 LY6HO94772 140 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 CYB5AP00167 134 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 CLPSP04118 112 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 COX6A1P12074 109 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 SSBP1Q04837 148 aaKnown RBP2.22□□□□□ -2.05
NUP54-209ENST00000510569 CIRBPQ14011 172 aaKnown RBP2.22□□□□□ -2.05
NUP54-209ENST00000510569 SS18Q15532 418 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 TDRG1Q3Y452 100 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 ATP11AUNQ6ZP68 121 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 SDIM1Q6ZPB5 146 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 ADM2Q7Z4H4 148 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 SBSPONQ8IVN8 264 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 VSTM2AQ8TAG5 236 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 CLEC2BQ92478 149 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 TMEM242Q9NWH2 141 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 OR5V1Q9UGF6 321 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 TRAPPC1Q9Y5R8 145 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 FRYLO94915 3013 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 DMXL1Q9Y485 3027 aa2.22□□□□□ -2.05
NUP54-209ENST00000510569 PTPRBP23467 1997 aa2.21□□□□□ -2.05
NUP54-209ENST00000510569 MYO15AQ9UKN7 3530 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 TRAV14DV4A0A0A6YYC5 116 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 UBE2L5PA0A1B0GUS4 154 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 A0A1B0GWA3 101 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 TMEM223A0PJW6 202 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 A6NED7 52 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 H3BMM0 161 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 TIMM17BO60830 172 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 ASAH2BP0C7U1 165 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 ZNF705BP0CI00 300 aaPredicted RBP2.21□□□□□ -2.06
NUP54-209ENST00000510569 SLC25A6P12236 298 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 SSR2P43308 183 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 UBE2L3P68036 154 aaKnown RBP2.21□□□□□ -2.06
NUP54-209ENST00000510569 SYCNQ0VAF6 134 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 ZNF345Q14585 488 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 DPPA3Q6W0C5 159 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 RPRMLQ8N4K4 120 aa2.21□□□□□ -2.06
NUP54-209ENST00000510569 C15orf53Q8NAA6 179 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms