RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 SMIM17P0DL12 118 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 GCSHP23434 173 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 RPS20P60866 119 aaKnown RBP3.29□□□□□ -1.88
HTT-206ENST00000509618 WFDC10BQ8IUB3 73 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 C10orf126Q8N4M7 172 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 FER1L6-AS1Q8NA97 138 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 OR2D3Q8NGH3 330 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 OR10AG1Q8NH19 301 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 ATP6V0E2Q8NHE4 81 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 DEFB104AQ8WTQ1 72 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 SMIM12Q96EX1 92 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 SFRP2Q96HF1 295 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 SAMD10Q9BYL1 202 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 EIF5A2Q9GZV4 153 aaKnown RBP3.29□□□□□ -1.88
HTT-206ENST00000509618 GTSF1LQ9H1H1 148 aa3.29□□□□□ -1.88
HTT-206ENST00000509618 IGHV3-38A0A0C4DH36 116 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 RBFOX3A6NFN3 312 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 F5H697 171 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 TMEM250H0YL14 139 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 K7EP13 123 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 OXTP01178 125 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 OR5AL1P0C617 328 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 TIRAPP58753 221 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 RPL36AP83881 106 aaKnown RBP3.28□□□□□ -1.88
HTT-206ENST00000509618 TOR2AQ5JU69 321 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 NFE4Q86UQ8 179 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 C14orf178Q8N769 122 aaPredicted RBP3.28□□□□□ -1.88
HTT-206ENST00000509618 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.28□□□□□ -1.88
HTT-206ENST00000509618 RPL36ALQ969Q0 106 aaKnown RBP3.28□□□□□ -1.88
HTT-206ENST00000509618 AP1S3Q96PC3 154 aa3.28□□□□□ -1.88
HTT-206ENST00000509618 TRBV20OR9-2A0A075B6H5 130 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 A0A087WWC5 75 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 TRBV10-1A0A0K0K1A3 114 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 C19orf71A6NCJ1 209 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 F2Z2F3 143 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 SNAI2O43623 268 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 PSCAO43653 123 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 IGLV2-8P01709 118 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 IGHV3-30P01768 117 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 IGHV3-33P01772 117 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 MGPP08493 103 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 IGHV3-30-3P0DP02 117 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 IGHV3-30-5P0DP03 117 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 GZMBP10144 247 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 ERVFC1-1P60608 527 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 RAB4BP61018 213 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 CACNG7P62955 275 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 LINC01556Q5JQF7 62 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 UFSP1Q6NVU6 142 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 KCNIP4Q6PIL6 250 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 TMEM70Q9BUB7 260 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 RPP21Q9H633 154 aaKnown RBP3.27□□□□□ -1.89
HTT-206ENST00000509618 MSRB1Q9NZV6 116 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 URGCP-MRPS24S4R325 110 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 LPAP08519 4548 aa3.27□□□□□ -1.89
HTT-206ENST00000509618 TRBV7-3A0A075B6L6 115 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 H7C1H1 209 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 K7EN84 100 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 PLA2G1BP04054 148 aaKnown RBP3.26□□□□□ -1.89
HTT-206ENST00000509618 TRGC1P0CF51 173 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 IGLC6P0CF74 106 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 LINC00694P0DN24 101 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 WFDC2Q14508 124 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 TWIST1Q15672 202 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 LINC01620Q4KN68 170 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 LYZL1Q6UWQ5 148 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 Q6ZSA8 131 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 SMIM15Q7Z3B0 74 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 NUDT10Q8NFP7 164 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 LYPD6BQ8NI32 183 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 OCC1Q8TAD7 63 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 BORCS7Q96B45 105 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 NUDT11Q96G61 164 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 FAM210AQ96ND0 272 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 SMIM7Q9BQ49 75 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 RNASE7Q9H1E1 156 aaKnown RBP3.26□□□□□ -1.89
HTT-206ENST00000509618 CDIP1Q9H305 208 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 Q9HAA7 133 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 Q9UF83 564 aa3.26□□□□□ -1.89
HTT-206ENST00000509618 A0A087WX48 190 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 IGLV5-52A0A0A0MRZ9 124 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 ZNF727A8MUV8 499 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 IBA57-AS1B1ANH7 110 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 TMEM262E9PQX1 116 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 ZNF561-AS1K7EIQ3 104 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 GATCO43716 136 aaKnown RBP3.25□□□□□ -1.89
HTT-206ENST00000509618 NTF3P20783 257 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 UBE2D3P61077 147 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 UBE2D2P62837 147 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 TEX261Q6UWH6 196 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 SCXQ7RTU7 201 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 NEXN-AS1Q8NBZ9 246 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 CHCHD5Q9BSY4 110 aa3.25□□□□□ -1.89
HTT-206ENST00000509618 FSIP2Q5CZC0 6907 aa3.24□□□□□ -1.89
HTT-206ENST00000509618 TRBV6-8A0A0A6YYG3 113 aa3.24□□□□□ -1.89
HTT-206ENST00000509618 TRAV8-3A0A0A6YYJ7 113 aa3.24□□□□□ -1.89
HTT-206ENST00000509618 LRCOL1A6NCL2 159 aa3.24□□□□□ -1.89
HTT-206ENST00000509618 A8MWL6 223 aa3.24□□□□□ -1.89
HTT-206ENST00000509618 SRP19P09132 144 aaKnown RBP3.24□□□□□ -1.89
HTT-206ENST00000509618 CTRLP40313 264 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms