RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 TEX49A0A1B0GTD5 131 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 TMEM30CPA0ZSE6 113 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 CTSGP08311 255 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 EFNA4P52798 201 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 UBE2D3P61077 147 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 UBE2D2P62837 147 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 SPATA45Q537H7 98 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 C1orf137Q5JT78 98 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 BPESC1Q9GZL8 116 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 MANBALQ9NQG1 85 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 CCL26Q9Y258 94 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 UNC13BO14795 1591 aa2.43□□□□□ -2.02
SMARCA5-202ENST00000508573 MYO3AQ8NEV4 1616 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 MADDQ8WXG6 1647 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 COL11A1P12107 1806 aaPredicted RBP2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 PATJQ8NI35 1801 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 TCHHQ07283 1943 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 PRR14LQ5THK1 2151 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 COL4A5P29400 1685 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 COL4A6Q14031 1691 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 TRAV40A0A0B4J280 105 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 CNBPP62633 177 aaKnown RBP2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 PYDC2Q56P42 97 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 Q5VV11 94 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 Q6ZTI0 123 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 LYPD1Q8N2G4 141 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 FREM3P0C091 2139 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 KIAA2026Q5HYC2 2103 aa2.42□□□□□ -2.02
SMARCA5-202ENST00000508573 LAMB4A4D0S4 1761 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 NRXN1Q9ULB1 1477 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 MYH4Q9Y623 1939 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 TRAV22A0A0B4J277 110 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 IGHV3-33P01772 117 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 UBE2D1P51668 147 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 PMCHL1Q16048 86 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 LY6EQ16553 131 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 TPRXLQ17RH7 258 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 VMO1Q7Z5L0 202 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 FAM223AQ8IWN6 122 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 Q8N6K4 173 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 C18orf32Q8TCD1 76 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 FAM167A-AS1Q96KT0 104 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 LIMD2Q9BT23 127 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 TIMM21Q9BVV7 248 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 MYO5CQ9NQX4 1742 aa2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 COL4A4P53420 1690 aaPredicted RBP2.41□□□□□ -2.02
SMARCA5-202ENST00000508573 DOCK2Q92608 1830 aa2.4□□□□□ -2.02
SMARCA5-202ENST00000508573 HEATR5BQ9P2D3 2071 aa2.4□□□□□ -2.02
SMARCA5-202ENST00000508573 UBR1Q8IWV7 1749 aa2.4□□□□□ -2.02
SMARCA5-202ENST00000508573 PTPN23Q9H3S7 1636 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 TANC1Q9C0D5 1861 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 TRBV7-3A0A075B6L6 115 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 TRBV10-1A0A0K0K1A3 114 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 HMGN3Q15651 99 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 NDUFA11Q86Y39 141 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 LINC01600Q96MT4 127 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 LAMB2P55268 1798 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 BLMP54132 1417 aaPredicted RBP2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 CLTCQ00610 1675 aaKnown RBP2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 MYO18AQ92614 2054 aaKnown RBP2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 SETBP1Q9Y6X0 1596 aa2.4□□□□□ -2.03
SMARCA5-202ENST00000508573 KNDC1Q76NI1 1749 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 NWD2Q9ULI1 1742 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 TOP2BQ02880 1626 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 COL16A1Q07092 1604 aaPredicted RBP2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 A0A0G2JQZ4 141 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 NUPR2A6NF83 97 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 F2Z2F3 143 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 KLKP1Q107X0 134 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 DEFB134Q4QY38 66 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 C10orf128Q5T292 105 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 CFAP126Q5VTH2 177 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 SFTA2Q6UW10 78 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 ZNF818PQ6ZRF7 136 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 KRTAP11-1Q8IUC1 163 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 SPACA4Q8TDM5 124 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 PRO1854Q9UHT4 67 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 CACNA1DQ01668 2161 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 MED13Q9UHV7 2174 aa2.39□□□□□ -2.03
SMARCA5-202ENST00000508573 CUX1P39880 1505 aa2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 ABCC2Q92887 1545 aa2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 CASP8AP2Q9UKL3 1982 aa2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 IGKV3-7A0A075B6H7 116 aa2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 KANTRA0A1W2PQU2 76 aa2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 CLPSL1A2RUU4 121 aa2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 SNRPFP62306 86 aaKnown RBP2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 Q8N9L7 120 aa2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 PATE1Q8WXA2 126 aa2.38□□□□□ -2.03
SMARCA5-202ENST00000508573 STRCP1A6NGW2 1772 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 TRAV23DV6A0A075B6W5 121 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 SDHAF1A6NFY7 115 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 CHKB-CPT1BH3BT56 60 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 EDDM3BP56851 147 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 ELOBQ15370 118 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 DMAC1Q96GE9 116 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 MRPL36Q9P0J6 103 aaKnown RBP2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 ORMDL1Q9P0S3 153 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 KDM6BO15054 1643 aa2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 TARBP1Q13395 1621 aaKnown RBP2.37□□□□□ -2.03
SMARCA5-202ENST00000508573 ABCC1P33527 1531 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms