RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 CCL8P80075 99 aa1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 C6orf52Q5T4I8 152 aa1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 ZNF818PQ6ZRF7 136 aa1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 GTF2H5Q6ZYL4 71 aa1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 SVBPQ8N300 66 aa1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 KNTC1P50748 2209 aa1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 KMT2BQ9UMN6 2715 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 ZNF142P52746 1687 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC13-209ENST00000508304 FAM135AQ9P2D6 1515 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 TRBV7-1A0A0A6YYK4 115 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 C20orf202A1L168 122 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 TNFP01375 233 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 UBE2D1P51668 147 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 ELOF1P60002 83 aaKnown RBP1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 INSL4Q14641 139 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 SPINK9Q5DT21 86 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 CGREF1Q99674 301 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 TCEAL7Q9BRU2 100 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 IFT140Q96RY7 1462 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 ESPL1Q14674 2120 aa1.22□□□□□ -2.21
TRAPPC13-209ENST00000508304 ZNF137PP52743 207 aa1.21□□□□□ -2.22
TRAPPC13-209ENST00000508304 Q8N8P6 123 aa1.21□□□□□ -2.22
TRAPPC13-209ENST00000508304 LINC00312Q9Y6C7 94 aa1.21□□□□□ -2.22
TRAPPC13-209ENST00000508304 RBBP6Q7Z6E9 1792 aaKnown RBP1.21□□□□□ -2.22
TRAPPC13-209ENST00000508304 MYOM2P54296 1465 aa1.2□□□□□ -2.22
TRAPPC13-209ENST00000508304 BCL9LQ86UU0 1499 aa1.2□□□□□ -2.22
TRAPPC13-209ENST00000508304 KDM6BO15054 1643 aa1.2□□□□□ -2.22
TRAPPC13-209ENST00000508304 FAM24AA6NFZ4 105 aa1.2□□□□□ -2.22
TRAPPC13-209ENST00000508304 HCG22E2RYF7 251 aa1.2□□□□□ -2.22
TRAPPC13-209ENST00000508304 EDDM3BP56851 147 aa1.2□□□□□ -2.22
TRAPPC13-209ENST00000508304 C10orf128Q5T292 105 aa1.2□□□□□ -2.22
TRAPPC13-209ENST00000508304 SCP2D1Q9UJQ7 156 aa1.2□□□□□ -2.22
TRAPPC13-209ENST00000508304 LAMA4Q16363 1823 aa1.19□□□□□ -2.22
TRAPPC13-209ENST00000508304 A2ML1A8K2U0 1454 aa1.19□□□□□ -2.22
TRAPPC13-209ENST00000508304 MUC22E2RYF6 1773 aaPredicted RBP1.19□□□□□ -2.22
TRAPPC13-209ENST00000508304 K7EIL1 84 aa1.19□□□□□ -2.22
TRAPPC13-209ENST00000508304 TTC9CQ8N5M4 171 aa1.19□□□□□ -2.22
TRAPPC13-209ENST00000508304 LAMB1P07942 1786 aa1.19□□□□□ -2.22
TRAPPC13-209ENST00000508304 NRXN2Q9P2S2 1712 aa1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 ABCA1O95477 2261 aa1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 CASKIN1Q8WXD9 1431 aa1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 SIX6O95475 246 aa1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 ACYP2P14621 99 aa1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 RPL37P61927 97 aaKnown RBP1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 MYOZ3Q8TDC0 251 aa1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 IER3IP1Q9Y5U9 82 aa1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 NWD2Q9ULI1 1742 aa1.18□□□□□ -2.22
TRAPPC13-209ENST00000508304 OOSP1A8MZH6 123 aa1.17□□□□□ -2.22
TRAPPC13-209ENST00000508304 BPESC1Q9GZL8 116 aa1.17□□□□□ -2.22
TRAPPC13-209ENST00000508304 CPSF1Q10570 1443 aaKnown RBP1.16□□□□□ -2.22
TRAPPC13-209ENST00000508304 SSSCA1O60232 199 aa1.16□□□□□ -2.22
TRAPPC13-209ENST00000508304 IFITM1P13164 125 aa1.16□□□□□ -2.22
TRAPPC13-209ENST00000508304 C5orf38Q86SI9 138 aa1.16□□□□□ -2.22
TRAPPC13-209ENST00000508304 C12orf57Q99622 126 aa1.16□□□□□ -2.22
TRAPPC13-209ENST00000508304 CUL7Q14999 1698 aa1.16□□□□□ -2.22
TRAPPC13-209ENST00000508304 PHIPQ8WWQ0 1821 aa1.15□□□□□ -2.22
TRAPPC13-209ENST00000508304 MED13LQ71F56 2210 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 UBE2L5PA0A1B0GUS4 154 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 PPP1R17O96001 155 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 ATP5EP56381 51 aaPredicted RBP1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 UBE2L3P68036 154 aaKnown RBP1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 COMMD6Q7Z4G1 85 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 SMIM11BQ8TCY0 68 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 CYP4F30PQ9H0H9 118 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 R4GMQ9 66 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 PARP14Q460N5 1801 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 PPIP5K1Q6PFW1 1433 aa1.15□□□□□ -2.23
TRAPPC13-209ENST00000508304 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.14□□□□□ -2.23
TRAPPC13-209ENST00000508304 PRR15LQ9BU68 103 aa1.14□□□□□ -2.23
TRAPPC13-209ENST00000508304 ARAP2Q8WZ64 1704 aa1.14□□□□□ -2.23
TRAPPC13-209ENST00000508304 RIMS1Q86UR5 1692 aaKnown RBP1.13□□□□□ -2.23
TRAPPC13-209ENST00000508304 A0A087WTM6 91 aa1.13□□□□□ -2.23
TRAPPC13-209ENST00000508304 A0A096LNT2 108 aa1.13□□□□□ -2.23
TRAPPC13-209ENST00000508304 TRGV1A0A0A0MS02 117 aa1.13□□□□□ -2.23
TRAPPC13-209ENST00000508304 TRAV1-2A0A0B4J238 106 aa1.13□□□□□ -2.23
TRAPPC13-209ENST00000508304 ATP6V1G2-DDX39BF2Z307 99 aa1.13□□□□□ -2.23
TRAPPC13-209ENST00000508304 LRRC37A3O60309 1634 aa1.13□□□□□ -2.23
TRAPPC13-209ENST00000508304 PLXNA1Q9UIW2 1896 aa1.12□□□□□ -2.23
TRAPPC13-209ENST00000508304 LOC285556D6RIA3 1793 aa1.12□□□□□ -2.23
TRAPPC13-209ENST00000508304 CLPSL1A2RUU4 121 aa1.12□□□□□ -2.23
TRAPPC13-209ENST00000508304 DCDP81605 110 aaKnown RBP1.12□□□□□ -2.23
TRAPPC13-209ENST00000508304 BAGE3Q86Y29 109 aa1.12□□□□□ -2.23
TRAPPC13-209ENST00000508304 V9GYH0 126 aa1.12□□□□□ -2.23
TRAPPC13-209ENST00000508304 NRKQ7Z2Y5 1582 aa1.12□□□□□ -2.23
TRAPPC13-209ENST00000508304 PZPP20742 1482 aa1.12□□□□□ -2.23
TRAPPC13-209ENST00000508304 MAPKBP1O60336 1514 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 F5P12259 2224 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 TMEM14DPA8MWL7 114 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 SPINK8P0C7L1 97 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 GCHFRP30047 84 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 GNG11P61952 73 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 SPAG11BQ08648 103 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 SPAG11AQ6PDA7 123 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 LENEPQ9Y5L5 61 aa1.11□□□□□ -2.23
TRAPPC13-209ENST00000508304 ARFGEF1Q9Y6D6 1849 aa1.1□□□□□ -2.23
TRAPPC13-209ENST00000508304 QRICH2Q9H0J4 1663 aa1.1□□□□□ -2.23
TRAPPC13-209ENST00000508304 CDK13Q14004 1512 aaKnown RBP1.1□□□□□ -2.23
TRAPPC13-209ENST00000508304 TMEM218A2RU14 115 aa1.1□□□□□ -2.23
TRAPPC13-209ENST00000508304 HSD52Q0P140 79 aa1.1□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms