RNA–Protein interactions for RNA: ENST00000507476.5

LINC01088-203, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 3 BASIC

Gene LINC01088, Length 785 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-203ENST00000507476 RTTNQ86VV8 2226 aa2.13□□□□□ -2.07
LINC01088-203ENST00000507476 ZNF142P52746 1687 aaPredicted RBP2.12□□□□□ -2.07
LINC01088-203ENST00000507476 IGKV2-40A0A087WW87 121 aaPredicted RBP2.12□□□□□ -2.07
LINC01088-203ENST00000507476 LOC110117498A0A087WWA1 95 aa2.12□□□□□ -2.07
LINC01088-203ENST00000507476 IGKV2D-40P01614 121 aaPredicted RBP2.12□□□□□ -2.07
LINC01088-203ENST00000507476 PYY3Q5JQD4 70 aa2.12□□□□□ -2.07
LINC01088-203ENST00000507476 BET1LQ9NYM9 111 aa2.12□□□□□ -2.07
LINC01088-203ENST00000507476 UQCR10Q9UDW1 63 aa2.12□□□□□ -2.07
LINC01088-203ENST00000507476 CDK12Q9NYV4 1490 aaPredicted RBP2.12□□□□□ -2.07
LINC01088-203ENST00000507476 LOC101927531A0A1B0GV80 90 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 ATOX1O00244 68 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 HCRTO43612 131 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 GYPAP02724 150 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 ASIPP42127 132 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 FXYD4P59646 89 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 KRTAP12-3P60328 96 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 SEC11AP67812 179 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 DEFB103AP81534 67 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 C20orf197Q8N268 126 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 MANBALQ9NQG1 85 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 PLEKHH2Q8IVE3 1493 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 MDC1Q14676 2089 aaKnown RBP2.11□□□□□ -2.07
LINC01088-203ENST00000507476 ARAP2Q8WZ64 1704 aa2.11□□□□□ -2.07
LINC01088-203ENST00000507476 LAMC3Q9Y6N6 1575 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 STRCP1A6NGW2 1772 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 TRBV7-1A0A0A6YYK4 115 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 FXYD1O00168 92 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 FAUP35544 74 aaKnown RBP2.1□□□□□ -2.07
LINC01088-203ENST00000507476 UBE2D1P51668 147 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 ZNF563Q8TA94 476 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 AMELYQ99218 206 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 PRO1933Q9H354 126 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 PATJQ8NI35 1801 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 ANKRD36BQ8N2N9 1353 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 MYOFQ9NZM1 2061 aa2.1□□□□□ -2.07
LINC01088-203ENST00000507476 MYH8P13535 1937 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 PTPRDP23468 1912 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 CHD1O14646 1710 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 MARF1Q9Y4F3 1742 aaKnown RBP2.09□□□□□ -2.07
LINC01088-203ENST00000507476 PRDM15P57071 1507 aaPredicted RBP2.09□□□□□ -2.07
LINC01088-203ENST00000507476 hADV29S1A0JD25 119 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 NDUFC1O43677 76 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 XAF1Q6GPH4 301 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 UNQ6190/PRO20217Q6UXQ8 127 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 COX7B2Q8TF08 81 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 KRTAP4-1Q9BYQ7 146 aa2.09□□□□□ -2.07
LINC01088-203ENST00000507476 PXDNQ92626 1479 aa2.08□□□□□ -2.08
LINC01088-203ENST00000507476 FN1P02751 2386 aaKnown RBP2.08□□□□□ -2.08
LINC01088-203ENST00000507476 ALPK2Q86TB3 2170 aa2.08□□□□□ -2.08
LINC01088-203ENST00000507476 ADGRB2O60241 1585 aa2.08□□□□□ -2.08
LINC01088-203ENST00000507476 Q6ZQY7 126 aa2.08□□□□□ -2.08
LINC01088-203ENST00000507476 NPVFQ9HCQ7 196 aa2.08□□□□□ -2.08
LINC01088-203ENST00000507476 V9GYV3 84 aa2.08□□□□□ -2.08
LINC01088-203ENST00000507476 UNC13CQ8NB66 2214 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 ARHGEF12Q9NZN5 1544 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 DCAF1Q9Y4B6 1507 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 CR1P17927 2039 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 CTTNBP2Q8WZ74 1663 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 TRBV7-3A0A075B6L6 115 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 LOC285095A0A1B0GVY8 99 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 IGKV2-29A2NJV5 120 aaPredicted RBP2.07□□□□□ -2.08
LINC01088-203ENST00000507476 TRAPPC2P0DI81 140 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 TRAPPC2BP0DI82 140 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 ELOF1P60002 83 aaKnown RBP2.07□□□□□ -2.08
LINC01088-203ENST00000507476 ZNF56Q15929 161 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 TSLPQ969D9 159 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 CYSTM1Q9H1C7 97 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 LINC00474Q9P2X8 69 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 BAZ2BQ9UIF8 2168 aaKnown RBP2.07□□□□□ -2.08
LINC01088-203ENST00000507476 COL5A1P20908 1838 aaPredicted RBP2.07□□□□□ -2.08
LINC01088-203ENST00000507476 GOLGA3Q08378 1498 aa2.07□□□□□ -2.08
LINC01088-203ENST00000507476 TET3O43151 1660 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 COL5A3P25940 1745 aaPredicted RBP2.06□□□□□ -2.08
LINC01088-203ENST00000507476 SBF2Q86WG5 1849 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 TRBV7-7A0A0K0K1E9 115 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 CHKB-CPT1BH3BT56 60 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 SFT2D2O95562 160 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 PPP1R17O96001 155 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 EDDM3BP56851 147 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 FXYD3Q14802 87 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 Q86TA4 180 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 OBSCN-AS1Q96MR7 158 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 DYNLRB1Q9NP97 96 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 R4GMQ9 66 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 PCDH15Q96QU1 1955 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 UACAQ9BZF9 1416 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 DOCK10Q96BY6 2186 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 SHANK2Q9UPX8 1470 aa2.06□□□□□ -2.08
LINC01088-203ENST00000507476 KIAA0100Q14667 2235 aaKnown RBP2.06□□□□□ -2.08
LINC01088-203ENST00000507476 FREM1Q5H8C1 2179 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 COX6CP09669 75 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 CCL3L1P16619 93 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 CAV3P56539 151 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 SPAG11BQ08648 103 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 KRTAP13-4Q3LI77 160 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 TMEM170BQ5T4T1 132 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 SPAG11AQ6PDA7 123 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 DEFB132Q7Z7B7 95 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 FAM213BQ8TBF2 198 aa2.05□□□□□ -2.08
LINC01088-203ENST00000507476 PRO1854Q9UHT4 67 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms