RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 SLC7A5P1Q8MH63 180 aa7.55□□□□□ -1.2
SNCA-210ENST00000506691 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.55□□□□□ -1.2
SNCA-210ENST00000506691 VSIG2Q96IQ7 327 aa7.55□□□□□ -1.2
SNCA-210ENST00000506691 DNAJC30Q96LL9 226 aa7.55□□□□□ -1.2
SNCA-210ENST00000506691 RPS10P5Q9NQ39 176 aa7.55□□□□□ -1.2
SNCA-210ENST00000506691 ABCA13Q86UQ4 5058 aa7.55□□□□□ -1.2
SNCA-210ENST00000506691 NACAE9PAV3 2078 aa7.55□□□□□ -1.2
SNCA-210ENST00000506691 IGHV3-73A0A0B4J1V6 119 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 A0A0J9YY99 117 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 NUDT3O95989 172 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 PPP1R17O96001 155 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 GYPEP15421 78 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 CCL18P55774 89 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 LINC00315P59091 139 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 HBBP68871 147 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 RPL36AP83881 106 aaKnown RBP7.54□□□□□ -1.2
SNCA-210ENST00000506691 ZNF56Q15929 161 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 COX19Q49B96 90 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 NEGR1Q7Z3B1 354 aa7.54□□□□□ -1.2
SNCA-210ENST00000506691 RPL36ALQ969Q0 106 aaKnown RBP7.54□□□□□ -1.2
SNCA-210ENST00000506691 TRBV7-3A0A075B6L6 115 aa7.53□□□□□ -1.2
SNCA-210ENST00000506691 A0A096LPF7 62 aa7.53□□□□□ -1.2
SNCA-210ENST00000506691 SRIP30626 198 aa7.53□□□□□ -1.2
SNCA-210ENST00000506691 TIRAPP58753 221 aa7.53□□□□□ -1.2
SNCA-210ENST00000506691 Q6ZR54 194 aa7.53□□□□□ -1.2
SNCA-210ENST00000506691 GATD1Q8NB37 220 aa7.53□□□□□ -1.2
SNCA-210ENST00000506691 A0A1B0GXF2 115 aa7.52□□□□□ -1.21
SNCA-210ENST00000506691 M0QY20 66 aa7.52□□□□□ -1.21
SNCA-210ENST00000506691 TMEM97Q5BJF2 176 aa7.52□□□□□ -1.21
SNCA-210ENST00000506691 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
SNCA-210ENST00000506691 HSPG2P98160 4391 aa7.51□□□□□ -1.21
SNCA-210ENST00000506691 PPBPP02775 128 aa7.51□□□□□ -1.21
SNCA-210ENST00000506691 MGPP08493 103 aa7.51□□□□□ -1.21
SNCA-210ENST00000506691 FAM104BQ5XKR9 115 aa7.51□□□□□ -1.21
SNCA-210ENST00000506691 Q6ZSN1 163 aa7.51□□□□□ -1.21
SNCA-210ENST00000506691 DAZ4Q86SG3 579 aaKnown RBP7.51□□□□□ -1.21
SNCA-210ENST00000506691 ATP6V0E2Q8NHE4 81 aa7.51□□□□□ -1.21
SNCA-210ENST00000506691 NIT2Q9NQR4 276 aa7.51□□□□□ -1.21
SNCA-210ENST00000506691 DAZ3Q9NR90 486 aaKnown RBP7.51□□□□□ -1.21
SNCA-210ENST00000506691 TNFRSF18Q9Y5U5 241 aa7.51□□□□□ -1.21
SNCA-210ENST00000506691 RAB4AP20338 218 aa7.5□□□□□ -1.21
SNCA-210ENST00000506691 CAMPP49913 170 aa7.5□□□□□ -1.21
SNCA-210ENST00000506691 MRPL54Q6P161 138 aaKnown RBP7.5□□□□□ -1.21
SNCA-210ENST00000506691 GTSF1LQ9H1H1 148 aa7.5□□□□□ -1.21
SNCA-210ENST00000506691 SUMO4Q6EEV6 95 aa7.49□□□□□ -1.21
SNCA-210ENST00000506691 LYPD5Q6UWN5 251 aa7.49□□□□□ -1.21
SNCA-210ENST00000506691 NEXN-AS1Q8NBZ9 246 aa7.49□□□□□ -1.21
SNCA-210ENST00000506691 ZNRF2Q8NHG8 242 aa7.49□□□□□ -1.21
SNCA-210ENST00000506691 SMCO4Q9NRQ5 59 aa7.49□□□□□ -1.21
SNCA-210ENST00000506691 TRBV24-1A0A075B6N3 115 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 TRBV6-5A0A0K0K1A5 114 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 GAGE12JA6NER3 117 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 K7EP13 123 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 PHOX2AO14813 284 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 LINC00694P0DN24 101 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 UBE2D3P61077 147 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 UBE2D2P62837 147 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 GAGE1Q13065 139 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 GAGE4Q13068 117 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 GAGE5Q13069 117 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 ESRGQ1W209 222 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 GAGE13Q4V321 117 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 UBE2DNLQ8IWF7 75 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 AMN1Q8IY45 258 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 RNF185Q96GF1 192 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 UPK3BQ9BT76 320 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 GNB1LQ9BYB4 327 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
SNCA-210ENST00000506691 MRPS16Q9Y3D3 137 aaKnown RBP7.48□□□□□ -1.21
SNCA-210ENST00000506691 TRAV8-6A0A0B4J262 113 aa7.47□□□□□ -1.21
SNCA-210ENST00000506691 LOC100131303A0A0U1RQF7 123 aa7.47□□□□□ -1.21
SNCA-210ENST00000506691 HLA-DQA1P01909 254 aa7.47□□□□□ -1.21
SNCA-210ENST00000506691 MT-ND6P03923 174 aa7.47□□□□□ -1.21
SNCA-210ENST00000506691 LELP1Q5T871 98 aa7.47□□□□□ -1.21
SNCA-210ENST00000506691 LAMTOR2Q9Y2Q5 125 aa7.47□□□□□ -1.21
SNCA-210ENST00000506691 URGCP-MRPS24S4R325 110 aa7.47□□□□□ -1.21
SNCA-210ENST00000506691 TCAPO15273 167 aa7.46□□□□□ -1.22
SNCA-210ENST00000506691 S100A1P23297 94 aa7.46□□□□□ -1.22
SNCA-210ENST00000506691 CKS2P33552 79 aa7.46□□□□□ -1.22
SNCA-210ENST00000506691 PKIAP61925 76 aa7.46□□□□□ -1.22
SNCA-210ENST00000506691 MRPL51Q4U2R6 128 aaKnown RBP7.46□□□□□ -1.22
SNCA-210ENST00000506691 C1orf134Q5TEV5 83 aa7.46□□□□□ -1.22
SNCA-210ENST00000506691 C20orf78Q9BR46 151 aa7.46□□□□□ -1.22
SNCA-210ENST00000506691 LINC00588Q9Y4M8 146 aa7.46□□□□□ -1.22
SNCA-210ENST00000506691 NCR2O95944 276 aa7.45□□□□□ -1.22
SNCA-210ENST00000506691 RPL32P62910 135 aaKnown RBP7.45□□□□□ -1.22
SNCA-210ENST00000506691 ELOBQ15370 118 aa7.45□□□□□ -1.22
SNCA-210ENST00000506691 OR10J3Q5JRS4 329 aa7.45□□□□□ -1.22
SNCA-210ENST00000506691 TMEM136Q6ZRR5 245 aa7.45□□□□□ -1.22
SNCA-210ENST00000506691 ORMDL3Q8N138 153 aa7.45□□□□□ -1.22
SNCA-210ENST00000506691 Q8N1X5 172 aa7.45□□□□□ -1.22
SNCA-210ENST00000506691 ST20Q9HBF5 79 aa7.45□□□□□ -1.22
SNCA-210ENST00000506691 TRAV9-2A0A087WT02 112 aa7.44□□□□□ -1.22
SNCA-210ENST00000506691 VCYO14598 125 aa7.44□□□□□ -1.22
SNCA-210ENST00000506691 BTF3P20290 206 aaKnown RBP7.44□□□□□ -1.22
SNCA-210ENST00000506691 Q9UF83 564 aa7.44□□□□□ -1.22
SNCA-210ENST00000506691 TRBV6-8A0A0A6YYG3 113 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 TRAV26-2A0A0B4J265 109 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 TRBV27A0A0K0K1C4 114 aa7.43□□□□□ -1.22
SNCA-210ENST00000506691 SDHAF1A6NFY7 115 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms