RNA–Protein interactions for RNA: ENST00000506018.5

NR1I3-222, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 1,380 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-222ENST00000506018 A0A1B0GW15 77 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 GRIFINA4D1Z8 144 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 RS1O15537 224 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 DNAH10OSP0CZ25 163 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 TIRAPP58753 221 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 RIGQ13278 110 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 COX19Q49B96 90 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 CDPF1Q6NVV7 123 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 SMIM15Q7Z3B0 74 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 WFDC10BQ8IUB3 73 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 PTH2Q96A98 100 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 MSRB1Q9NZV6 116 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 C11orf21Q9P2W6 132 aa7.1□□□□□ -1.27
NR1I3-222ENST00000506018 A0A1B0GUT8 65 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 A8MWV9 139 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 SNAI2O43623 268 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 CRYGDP07320 174 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 ARMS2P0C7Q2 107 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 IGLC6P0CF74 106 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 GZMBP10144 247 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 SPANXN1Q5VSR9 72 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 CFAP126Q5VTH2 177 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 ATRAIDQ6UW56 229 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 ATP5L2Q7Z4Y8 100 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 ZFP82Q8N141 532 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 MAPKAPK5-AS1Q8N8E1 139 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 NUP35Q8NFH5 326 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 C9orf85Q96MD7 179 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 URGCP-MRPS24S4R325 110 aa7.09□□□□□ -1.27
NR1I3-222ENST00000506018 IGHV3-38A0A0C4DH36 116 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 H3BVH4 76 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 PSCAO43653 123 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 CTRLP40313 264 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 OR10J3Q5JRS4 329 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 PIK3CD-AS1Q5SR53 167 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 RASL11AQ6T310 242 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 LYZL1Q6UWQ5 148 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 Q6ZRN7 208 aaPredicted RBP7.08□□□□□ -1.28
NR1I3-222ENST00000506018 SLC25A29Q8N8R3 303 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 GTSF1Q8WW33 167 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 PGLYRP4Q96LB8 373 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 TRBV24-1A0A075B6N3 115 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 LOC100131303A0A0U1RQF7 123 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 TRGC1P0CF51 173 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 RNASE3P12724 160 aaKnown RBP7.08□□□□□ -1.28
NR1I3-222ENST00000506018 KRTAP10-2P60368 255 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 TWIST1Q15672 202 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 ZFP2Q6ZN57 461 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 CNFNQ9BYD5 112 aa7.08□□□□□ -1.28
NR1I3-222ENST00000506018 IGHV3-73A0A0B4J1V6 119 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 SMIM17P0DL12 118 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 HBBP68871 147 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 ELOBQ15370 118 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 LINC01556Q5JQF7 62 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 LELP1Q5T871 98 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 ATP6V0E2Q8NHE4 81 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 GTSF1LQ9H1H1 148 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 SCRT2Q9NQ03 307 aa7.07□□□□□ -1.28
NR1I3-222ENST00000506018 A0A087WTM6 91 aa7.06□□□□□ -1.28
NR1I3-222ENST00000506018 M0R381 172 aa7.06□□□□□ -1.28
NR1I3-222ENST00000506018 RHODO00212 210 aa7.06□□□□□ -1.28
NR1I3-222ENST00000506018 NTF3P20783 257 aa7.06□□□□□ -1.28
NR1I3-222ENST00000506018 CBLN2Q8IUK8 224 aa7.06□□□□□ -1.28
NR1I3-222ENST00000506018 AP1S3Q96PC3 154 aa7.06□□□□□ -1.28
NR1I3-222ENST00000506018 TNFRSF18Q9Y5U5 241 aa7.06□□□□□ -1.28
NR1I3-222ENST00000506018 MT-ND6P03923 174 aa7.05□□□□□ -1.28
NR1I3-222ENST00000506018 CAMPP49913 170 aa7.05□□□□□ -1.28
NR1I3-222ENST00000506018 RAB4BP61018 213 aa7.05□□□□□ -1.28
NR1I3-222ENST00000506018 MRPL54Q6P161 138 aaKnown RBP7.05□□□□□ -1.28
NR1I3-222ENST00000506018 Q8N1X5 172 aa7.05□□□□□ -1.28
NR1I3-222ENST00000506018 OR10AG1Q8NH19 301 aa7.05□□□□□ -1.28
NR1I3-222ENST00000506018 IBA57-AS1B1ANH7 110 aa7.04□□□□□ -1.28
NR1I3-222ENST00000506018 SCO1O75880 301 aa7.04□□□□□ -1.28
NR1I3-222ENST00000506018 HLA-DQA1P01909 254 aa7.04□□□□□ -1.28
NR1I3-222ENST00000506018 SSTP61278 116 aa7.04□□□□□ -1.28
NR1I3-222ENST00000506018 GNB1LQ9BYB4 327 aa7.04□□□□□ -1.28
NR1I3-222ENST00000506018 RYR1P21817 5038 aa7.04□□□□□ -1.28
NR1I3-222ENST00000506018 TGIF2-C20orf24A0A0A6YYL0 155 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 A0A1B0GXF2 115 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 GAGE12JA6NER3 117 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 GAGE1Q13065 139 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 GAGE4Q13068 117 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 GAGE5Q13069 117 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 LAGE3Q14657 143 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 GAGE13Q4V321 117 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 FAM74A4Q5TZK3 123 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 FRZBQ92765 325 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 TM2D2Q9BX73 214 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 TMEM191AQ9H0A3 160 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 DPH3P1Q9H4G8 78 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 LRP1BQ9NZR2 4599 aa7.03□□□□□ -1.28
NR1I3-222ENST00000506018 MUC21A0A0G2JKD1 596 aa7.02□□□□□ -1.29
NR1I3-222ENST00000506018 MUC21A0A140T8X8 626 aa7.02□□□□□ -1.29
NR1I3-222ENST00000506018 IGHV3-30P01768 117 aa7.02□□□□□ -1.29
NR1I3-222ENST00000506018 IGHV3-33P01772 117 aa7.02□□□□□ -1.29
NR1I3-222ENST00000506018 IGHV3-30-3P0DP02 117 aa7.02□□□□□ -1.29
NR1I3-222ENST00000506018 IGHV3-30-5P0DP03 117 aa7.02□□□□□ -1.29
NR1I3-222ENST00000506018 NTN5Q8WTR8 489 aaPredicted RBP7.02□□□□□ -1.29
NR1I3-222ENST00000506018 YPEL4Q96NS1 127 aa7.02□□□□□ -1.29
NR1I3-222ENST00000506018 Q9HAA7 133 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms