RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 CBLN1P23435 193 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 UBE2D1P51668 147 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 Q96NJ1 140 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 PRR15LQ9BU68 103 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 SEC11CQ9BY50 192 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 LINC00470Q9BZP3 86 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 BPESC1Q9GZL8 116 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 DAPK1P53355 1430 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
CHD1-203ENST00000505657 PSME4Q14997 1843 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 IGF2RP11717 2491 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 TTC28Q96AY4 2481 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 GVQW2A0A096LPI5 108 aaPredicted RBP0.43□□□□□ -2.34
CHD1-203ENST00000505657 MCRIP1C9JLW8 97 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 IFNA17P01571 189 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 EDDM3BP56851 147 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 SMIM11BQ8TCY0 68 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 SMR3AQ99954 134 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 LAMC3Q9Y6N6 1575 aa0.43□□□□□ -2.34
CHD1-203ENST00000505657 CDK13Q14004 1512 aaKnown RBP0.43□□□□□ -2.34
CHD1-203ENST00000505657 KDM6BO15054 1643 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 TRGV1A0A0A0MS02 117 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 FAM92AA1XBS5 289 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 CLPSL1A2RUU4 121 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 KRTAP2-3P0C7H8 128 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 SELENOWP63302 87 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 KRTAP21-1Q3LI58 79 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 KRTAP2-4Q9BYR9 128 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 KRTAP2-1Q9BYU5 128 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 F8P00451 2351 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 CACNA1CQ13936 2221 aa0.42□□□□□ -2.34
CHD1-203ENST00000505657 ZNF518AQ6AHZ1 1483 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 CUL7Q14999 1698 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 POLQO75417 2590 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 TRBV10-3A0A0K0K1G6 114 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 APODP05090 189 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 RBM3P98179 157 aaKnown RBP0.41□□□□□ -2.34
CHD1-203ENST00000505657 MEIG1Q5JSS6 88 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 VMO1Q7Z5L0 202 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 LSM10Q969L4 123 aaKnown RBP0.41□□□□□ -2.34
CHD1-203ENST00000505657 PROK2Q9HC23 129 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 NALCNQ8IZF0 1738 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 CFTRP13569 1480 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 PLXNB2O15031 1838 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 ZNF236Q9UL36 1845 aa0.41□□□□□ -2.34
CHD1-203ENST00000505657 TPRP12270 2363 aaKnown RBP0.4□□□□□ -2.34
CHD1-203ENST00000505657 CASKIN1Q8WXD9 1431 aa0.4□□□□□ -2.34
CHD1-203ENST00000505657 LRRC37A3O60309 1634 aa0.4□□□□□ -2.35
CHD1-203ENST00000505657 PHGR1C9JFL3 82 aa0.4□□□□□ -2.35
CHD1-203ENST00000505657 APOC4-APOC2K7ER74 178 aa0.4□□□□□ -2.35
CHD1-203ENST00000505657 AGPAT4-IT1Q9H0P7 198 aa0.4□□□□□ -2.35
CHD1-203ENST00000505657 LINC00312Q9Y6C7 94 aa0.4□□□□□ -2.35
CHD1-203ENST00000505657 WNK3Q9BYP7 1800 aa0.4□□□□□ -2.35
CHD1-203ENST00000505657 MBD5Q9P267 1494 aa0.4□□□□□ -2.35
CHD1-203ENST00000505657 PTPRZ1P23471 2315 aaPredicted RBP0.39□□□□□ -2.35
CHD1-203ENST00000505657 AHCTF1Q8WYP5 2266 aa0.39□□□□□ -2.35
CHD1-203ENST00000505657 ABCA12Q86UK0 2595 aa0.39□□□□□ -2.35
CHD1-203ENST00000505657 TRAV1-2A0A0B4J238 106 aa0.39□□□□□ -2.35
CHD1-203ENST00000505657 K7EP13 123 aa0.39□□□□□ -2.35
CHD1-203ENST00000505657 INSL4Q14641 139 aa0.39□□□□□ -2.35
CHD1-203ENST00000505657 ZNF818PQ6ZRF7 136 aa0.39□□□□□ -2.35
CHD1-203ENST00000505657 COPS9Q8WXC6 57 aa0.39□□□□□ -2.35
CHD1-203ENST00000505657 GOLGA3Q08378 1498 aa0.39□□□□□ -2.35
CHD1-203ENST00000505657 ROBO1Q9Y6N7 1651 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 UNC13BO14795 1591 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 IFT140Q96RY7 1462 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 LOC100130705A0A1B0GUX0 176 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 TMEM14DPA8MWL7 114 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 NMBP08949 121 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 CCL8P80075 99 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 SARNPP82979 210 aaKnown RBP0.38□□□□□ -2.35
CHD1-203ENST00000505657 SPINK6Q6UWN8 80 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 Q6ZRX8 168 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 RERGLQ9H628 205 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 SERP1Q9Y6X1 66 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 MAST4O15021 2626 aa0.38□□□□□ -2.35
CHD1-203ENST00000505657 ASXL3Q9C0F0 2248 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 TRAV13-2A0A0B4J235 113 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 MIF4GDA9UHW6 222 aaKnown RBP0.37□□□□□ -2.35
CHD1-203ENST00000505657 HCG22E2RYF7 251 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 GCHFRP30047 84 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 Q8N8P6 123 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.37□□□□□ -2.35
CHD1-203ENST00000505657 WFDC6Q9BQY6 131 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 SNRNP25Q9BV90 132 aaKnown RBP0.37□□□□□ -2.35
CHD1-203ENST00000505657 SCP2D1Q9UJQ7 156 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 CELSR2Q9HCU4 2923 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 QRICH2Q9H0J4 1663 aa0.37□□□□□ -2.35
CHD1-203ENST00000505657 ROCK2O75116 1388 aaKnown RBP0.36□□□□□ -2.35
CHD1-203ENST00000505657 SPAARA0A1B0GVQ0 90 aa0.36□□□□□ -2.35
CHD1-203ENST00000505657 Q6AWC8 147 aa0.36□□□□□ -2.35
CHD1-203ENST00000505657 NAA60Q9H7X0 242 aa0.36□□□□□ -2.35
CHD1-203ENST00000505657 PIEZO1Q92508 2521 aa0.36□□□□□ -2.35
CHD1-203ENST00000505657 PLCE1Q9P212 2302 aa0.36□□□□□ -2.35
CHD1-203ENST00000505657 ZFYVE26Q68DK2 2539 aa0.35□□□□□ -2.35
CHD1-203ENST00000505657 ZMYM4Q5VZL5 1548 aa0.35□□□□□ -2.35
CHD1-203ENST00000505657 SIX6O95475 246 aa0.35□□□□□ -2.35
CHD1-203ENST00000505657 SMIM6P0DI80 62 aa0.35□□□□□ -2.35
CHD1-203ENST00000505657 C10orf128Q5T292 105 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 106.8 ms