RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 IGKV2D-40P01614 121 aaPredicted RBP1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 COX6CP09669 75 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 CCL3L1P16619 93 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 ELOF1P60002 83 aaKnown RBP1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 SPAG11BQ08648 103 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 SPAG11AQ6PDA7 123 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 Q6ZQY7 126 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 SERP2Q8N6R1 65 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 ZNF563Q8TA94 476 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 S100A16Q96FQ6 103 aaKnown RBP1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 S100A13Q99584 98 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 NXT2Q9NPJ8 142 aaKnown RBP1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 V9GYH0 126 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 RTTNQ86VV8 2226 aa1.74□□□□□ -2.13
HMGB1P22-201ENST00000505315 KDM6BO15054 1643 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 TMEM170BQ5T4T1 132 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 PP632Q6XCG6 107 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 Q8N6K4 173 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 C5orf56Q8N8D9 126 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 TRGV9Q99603 122 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 CACFD1Q9UGQ2 172 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 LENEPQ9Y5L5 61 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 R4GMQ9 66 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 ANKRD26Q9UPS8 1709 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 CEP192Q8TEP8 1941 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 MED12LQ86YW9 2145 aa1.73□□□□□ -2.13
HMGB1P22-201ENST00000505315 FREM1Q5H8C1 2179 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 TRBV7-7A0A0K0K1E9 115 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 NBDYA0A0U1RRE5 68 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 LOC285095A0A1B0GVY8 99 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 UQCRHP07919 91 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 CAV3P56539 151 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 FAM167A-AS1Q96KT0 104 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 LINC00208Q96KT6 92 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 C20orf78Q9BR46 151 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 UACAQ9BZF9 1416 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 ALPK2Q86TB3 2170 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 PTPRFP10586 1907 aa1.72□□□□□ -2.13
HMGB1P22-201ENST00000505315 TNS1Q9HBL0 1735 aaKnown RBP1.71□□□□□ -2.13
HMGB1P22-201ENST00000505315 FN1P02751 2386 aaKnown RBP1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 MED14O60244 1454 aa1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 ARHGAP35Q9NRY4 1499 aa1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 TRAV22A0A0B4J277 110 aa1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 SYS1-DBNDD2H3BUS1 97 aa1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 KRTAP13-4Q3LI77 160 aa1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 KRTAP13-3Q3SY46 172 aa1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 NDUFA4L2Q9NRX3 87 aa1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 MUC22E2RYF6 1773 aaPredicted RBP1.71□□□□□ -2.14
HMGB1P22-201ENST00000505315 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 CTXND1A0A1B0GTU2 59 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 CLPSL1A2RUU4 121 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 HMGN4O00479 90 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 NCR3O14931 201 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 NMBP08949 121 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 KRTAP10-8P60410 259 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 PMCHL1Q16048 86 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 UNQ6190/PRO20217Q6UXQ8 127 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 CCL19Q99731 98 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 NWD2Q9ULI1 1742 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 NINQ8N4C6 2090 aa1.7□□□□□ -2.14
HMGB1P22-201ENST00000505315 SHANK2Q9UPX8 1470 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 PLXNA4Q9HCM2 1894 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 BLMP54132 1417 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 SIP14410 1827 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 SMIM11AP58511 58 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 KRTAP10-1P60331 282 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 KRTAP10-5P60370 271 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 UBE2D3P61077 147 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 UBE2D2P62837 147 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 KLKP1Q107X0 134 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 ADIRFQ15847 76 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 C6orf52Q5T4I8 152 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 Q5VV11 94 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 ZNF720Q7Z2F6 126 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 ARL2-SNX15V9GYD0 113 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 PRDM15P57071 1507 aaPredicted RBP1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 PLXNA2O75051 1894 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 MLH3Q9UHC1 1453 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 KIAA1551Q9HCM1 1747 aa1.69□□□□□ -2.14
HMGB1P22-201ENST00000505315 LAMC3Q9Y6N6 1575 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 CTTNBP2Q8WZ74 1663 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 EDC4Q6P2E9 1401 aaKnown RBP1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 ABCC3O15438 1527 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 TRBV30A0A0K0K1B3 111 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 ZNF815PA8K554 130 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 DEFB132Q7Z7B7 95 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 RABAC1Q9UI14 185 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 SPCS1Q9Y6A9 102 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 ABCA3Q99758 1704 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 MDC1Q14676 2089 aaKnown RBP1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 ICE1Q9Y2F5 2266 aa1.68□□□□□ -2.14
HMGB1P22-201ENST00000505315 TOPAZ1Q8N9V7 1692 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 LAMB1P07942 1786 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 SPAG17Q6Q759 2223 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 COL5A3P25940 1745 aaPredicted RBP1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 TMEM14DPA8MWL7 114 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 F8VRH5 84 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 EFNA4P52798 201 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 PSMG4Q5JS54 123 aa1.67□□□□□ -2.14
HMGB1P22-201ENST00000505315 ALKAL2Q6UX46 152 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms