RNA–Protein interactions for RNA: ENST00000505119.1

NEK1-202, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-202ENST00000505119 SPCS2Q15005 226 aa-1.08□□□□□ -2.58
NEK1-202ENST00000505119 PPP1R2P3Q6NXS1 205 aa-1.08□□□□□ -2.58
NEK1-202ENST00000505119 ATP11AUNQ6ZP68 121 aa-1.08□□□□□ -2.58
NEK1-202ENST00000505119 MYH13Q9UKX3 1938 aa-1.09□□□□□ -2.58
NEK1-202ENST00000505119 TRBV10-3A0A0K0K1G6 114 aa-1.09□□□□□ -2.58
NEK1-202ENST00000505119 CLPSL1A2RUU4 121 aa-1.09□□□□□ -2.58
NEK1-202ENST00000505119 DPM2O94777 84 aa-1.09□□□□□ -2.58
NEK1-202ENST00000505119 SAMD13Q5VXD3 122 aa-1.09□□□□□ -2.58
NEK1-202ENST00000505119 TMEM35BQ8NCS4 154 aa-1.09□□□□□ -2.58
NEK1-202ENST00000505119 WFDC6Q9BQY6 131 aa-1.09□□□□□ -2.58
NEK1-202ENST00000505119 FLNBO75369 2602 aaKnown RBP-1.09□□□□□ -2.58
NEK1-202ENST00000505119 CCDC179H3BU77 68 aa-1.1□□□□□ -2.59
NEK1-202ENST00000505119 RPS28P62857 69 aaKnown RBP-1.1□□□□□ -2.59
NEK1-202ENST00000505119 CLLU1Q5K131 121 aa-1.1□□□□□ -2.59
NEK1-202ENST00000505119 OR8I2Q8N0Y5 310 aa-1.1□□□□□ -2.59
NEK1-202ENST00000505119 BANF2Q9H503 90 aa-1.1□□□□□ -2.59
NEK1-202ENST00000505119 CALML5Q9NZT1 146 aa-1.1□□□□□ -2.59
NEK1-202ENST00000505119 LSM2Q9Y333 95 aaKnown RBP-1.1□□□□□ -2.59
NEK1-202ENST00000505119 USH2AO75445 5202 aa-1.11□□□□□ -2.59
NEK1-202ENST00000505119 PIN1P1O15428 100 aa-1.11□□□□□ -2.59
NEK1-202ENST00000505119 EDDM3BP56851 147 aa-1.11□□□□□ -2.59
NEK1-202ENST00000505119 PBRM1Q86U86 1689 aa-1.11□□□□□ -2.59
NEK1-202ENST00000505119 HYDINQ4G0P3 5121 aa-1.11□□□□□ -2.59
NEK1-202ENST00000505119 IBTKQ9P2D0 1353 aaPredicted RBP-1.11□□□□□ -2.59
NEK1-202ENST00000505119 LAMC1P11047 1609 aa-1.11□□□□□ -2.59
NEK1-202ENST00000505119 MYO7BQ6PIF6 2116 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 TRAV1-2A0A0B4J238 106 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 J3QLW9 94 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 M0R2P5 195 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 SMIM24O75264 130 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 LINC01545Q5VT33 79 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 Q8IZM0 81 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 NDUFA12Q9UI09 145 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 IFT172Q9UG01 1749 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 WNK3Q9BYP7 1800 aa-1.12□□□□□ -2.59
NEK1-202ENST00000505119 TRAV36DV7A0A075B6V5 113 aa-1.13□□□□□ -2.59
NEK1-202ENST00000505119 TRAV22A0A0B4J277 110 aa-1.13□□□□□ -2.59
NEK1-202ENST00000505119 J3KT08 172 aa-1.13□□□□□ -2.59
NEK1-202ENST00000505119 TNFSF15O95150 251 aa-1.13□□□□□ -2.59
NEK1-202ENST00000505119 RBP4P02753 201 aa-1.13□□□□□ -2.59
NEK1-202ENST00000505119 RBM3P98179 157 aaKnown RBP-1.13□□□□□ -2.59
NEK1-202ENST00000505119 TFAMQ00059 246 aaKnown RBP-1.13□□□□□ -2.59
NEK1-202ENST00000505119 Q5VV11 94 aa-1.13□□□□□ -2.59
NEK1-202ENST00000505119 RYR1P21817 5038 aa-1.13□□□□□ -2.59
NEK1-202ENST00000505119 ERCC6Q03468 1493 aa-1.13□□□□□ -2.59
NEK1-202ENST00000505119 BORCS7-ASMTA0A0B4J1R7 106 aa-1.14□□□□□ -2.59
NEK1-202ENST00000505119 A0A1B0GV72 72 aa-1.14□□□□□ -2.59
NEK1-202ENST00000505119 SCTP09683 121 aa-1.14□□□□□ -2.59
NEK1-202ENST00000505119 C10orf82Q8WW14 230 aa-1.14□□□□□ -2.59
NEK1-202ENST00000505119 SYNJ1O43426 1573 aa-1.15□□□□□ -2.59
NEK1-202ENST00000505119 FABP1P07148 127 aa-1.15□□□□□ -2.59
NEK1-202ENST00000505119 HAMPP81172 84 aa-1.15□□□□□ -2.59
NEK1-202ENST00000505119 CENPHQ9H3R5 247 aa-1.15□□□□□ -2.59
NEK1-202ENST00000505119 HIGD1AQ9Y241 93 aa-1.15□□□□□ -2.59
NEK1-202ENST00000505119 MXRA5Q9NR99 2828 aa-1.15□□□□□ -2.59
NEK1-202ENST00000505119 KDM3BQ7LBC6 1761 aa-1.16□□□□□ -2.59
NEK1-202ENST00000505119 BCL9LQ86UU0 1499 aa-1.16□□□□□ -2.59
NEK1-202ENST00000505119 A0A1B0GX51 115 aa-1.16□□□□□ -2.6
NEK1-202ENST00000505119 YPEL1O60688 119 aa-1.16□□□□□ -2.6
NEK1-202ENST00000505119 BCE1O60756 84 aa-1.16□□□□□ -2.6
NEK1-202ENST00000505119 S100GP29377 79 aa-1.16□□□□□ -2.6
NEK1-202ENST00000505119 UBE2D1P51668 147 aa-1.16□□□□□ -2.6
NEK1-202ENST00000505119 CDK5RAP2Q96SN8 1893 aa-1.16□□□□□ -2.6
NEK1-202ENST00000505119 UBR4Q5T4S7 5183 aa-1.17□□□□□ -2.6
NEK1-202ENST00000505119 STARD9Q9P2P6 4700 aa-1.17□□□□□ -2.6
NEK1-202ENST00000505119 KIAA1109Q2LD37 5005 aa-1.17□□□□□ -2.6
NEK1-202ENST00000505119 MYH6P13533 1939 aa-1.17□□□□□ -2.6
NEK1-202ENST00000505119 GVINP1Q7Z2Y8 2422 aa-1.17□□□□□ -2.6
NEK1-202ENST00000505119 ATRQ13535 2644 aa-1.18□□□□□ -2.6
NEK1-202ENST00000505119 SONP18583 2426 aaKnown RBP-1.18□□□□□ -2.6
NEK1-202ENST00000505119 C9orf116Q5BN46 136 aaPredicted RBP-1.18□□□□□ -2.6
NEK1-202ENST00000505119 MIC13Q5XKP0 118 aa-1.18□□□□□ -2.6
NEK1-202ENST00000505119 TCTE3Q8IZS6 198 aa-1.18□□□□□ -2.6
NEK1-202ENST00000505119 DDA1Q9BW61 102 aa-1.18□□□□□ -2.6
NEK1-202ENST00000505119 C10orf71Q711Q0 1435 aa-1.18□□□□□ -2.6
NEK1-202ENST00000505119 TRBV20-1A0A075B6N2 111 aa-1.19□□□□□ -2.6
NEK1-202ENST00000505119 CMPK1P30085 196 aa-1.19□□□□□ -2.6
NEK1-202ENST00000505119 SCN3BQ9NY72 215 aa-1.19□□□□□ -2.6
NEK1-202ENST00000505119 SPCS1Q9Y6A9 102 aa-1.19□□□□□ -2.6
NEK1-202ENST00000505119 LAMA2P24043 3122 aaKnown RBP-1.2□□□□□ -2.6
NEK1-202ENST00000505119 ITPR3Q14573 2671 aa-1.2□□□□□ -2.6
NEK1-202ENST00000505119 USP9YO00507 2555 aaPredicted RBP-1.2□□□□□ -2.6
NEK1-202ENST00000505119 FLGP20930 4061 aaPredicted RBP-1.2□□□□□ -2.6
NEK1-202ENST00000505119 PRKDCP78527 4128 aaKnown RBP-1.2□□□□□ -2.6
NEK1-202ENST00000505119 K7EQZ3 153 aa-1.2□□□□□ -2.6
NEK1-202ENST00000505119 PITX3O75364 302 aa-1.2□□□□□ -2.6
NEK1-202ENST00000505119 PIRTP0C851 137 aa-1.2□□□□□ -2.6
NEK1-202ENST00000505119 UBE2G1P62253 170 aa-1.2□□□□□ -2.6
NEK1-202ENST00000505119 CFAP126Q5VTH2 177 aa-1.2□□□□□ -2.6
NEK1-202ENST00000505119 VSTM2AQ8TAG5 236 aa-1.2□□□□□ -2.6
NEK1-202ENST00000505119 MAGOHBQ96A72 148 aaKnown RBP-1.2□□□□□ -2.6
NEK1-202ENST00000505119 GINS2Q9Y248 185 aa-1.2□□□□□ -2.6
NEK1-202ENST00000505119 LRP6O75581 1613 aa-1.21□□□□□ -2.6
NEK1-202ENST00000505119 M0R129 80 aa-1.21□□□□□ -2.6
NEK1-202ENST00000505119 BAGE3Q86Y29 109 aa-1.21□□□□□ -2.6
NEK1-202ENST00000505119 SKA2Q8WVK7 121 aaPredicted RBP-1.21□□□□□ -2.6
NEK1-202ENST00000505119 SVEP1Q4LDE5 3571 aa-1.22□□□□□ -2.6
NEK1-202ENST00000505119 I3L2K1 104 aa-1.22□□□□□ -2.6
NEK1-202ENST00000505119 SPANXN1Q5VSR9 72 aa-1.22□□□□□ -2.6
NEK1-202ENST00000505119 RPRMQ9NS64 109 aa-1.22□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms