RNA–Protein interactions for RNA: ENST00000505005.5

NR1I3-220, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 985 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-220ENST00000505005 CNFNQ9BYD5 112 aa6.81□□□□□ -1.32
NR1I3-220ENST00000505005 DPH3P1Q9H4G8 78 aa6.81□□□□□ -1.32
NR1I3-220ENST00000505005 SMIM27A0A1W2PRY6 76 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 COLCA2A8K830 154 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 PPP1R17O96001 155 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 S100A8P05109 93 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 CRYGDP07320 174 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 ZNF56Q15929 161 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 OR10J3Q5JRS4 329 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 UFSP1Q6NVU6 142 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 RASL11AQ6T310 242 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 DAZ4Q86SG3 579 aaKnown RBP6.8□□□□□ -1.32
NR1I3-220ENST00000505005 TSKUQ8WUA8 353 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 TPPP3Q9BW30 176 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 DAZ3Q9NR90 486 aaKnown RBP6.8□□□□□ -1.32
NR1I3-220ENST00000505005 URGCP-MRPS24S4R325 110 aa6.8□□□□□ -1.32
NR1I3-220ENST00000505005 PLECQ15149 4684 aaKnown RBP6.79□□□□□ -1.32
NR1I3-220ENST00000505005 IGHV3-73A0A0B4J1V6 119 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 IGHV3-38A0A0C4DH36 116 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 A0A1B0GW15 77 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 DNAH10OSP0CZ25 163 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 RAB5AP20339 215 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 CTRLP40313 264 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 TWIST1Q15672 202 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 ATP5L2Q7Z4Y8 100 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 OR10AG1Q8NH19 301 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 RNASE7Q9H1E1 156 aaKnown RBP6.79□□□□□ -1.32
NR1I3-220ENST00000505005 TNFRSF18Q9Y5U5 241 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 COX11Q9Y6N1 276 aa6.79□□□□□ -1.32
NR1I3-220ENST00000505005 ALMS1Q8TCU4 4167 aa6.78□□□□□ -1.32
NR1I3-220ENST00000505005 IGLV2-18A0A075B6J9 118 aa6.78□□□□□ -1.32
NR1I3-220ENST00000505005 A0A087WWL8 130 aa6.78□□□□□ -1.32
NR1I3-220ENST00000505005 NTF3P20783 257 aa6.78□□□□□ -1.32
NR1I3-220ENST00000505005 RIGQ13278 110 aa6.78□□□□□ -1.32
NR1I3-220ENST00000505005 LINC01556Q5JQF7 62 aa6.78□□□□□ -1.32
NR1I3-220ENST00000505005 LYZL1Q6UWQ5 148 aa6.78□□□□□ -1.32
NR1I3-220ENST00000505005 NAT8BQ9UHF3 227 aa6.78□□□□□ -1.32
NR1I3-220ENST00000505005 A0A1B0GUT8 65 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 GAGE12JA6NER3 117 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 M0R2N4 97 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 MT-ND6P03923 174 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 GAGE1Q13065 139 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 GAGE4Q13068 117 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 GAGE5Q13069 117 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 LAGE3Q14657 143 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 GAGE13Q4V321 117 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 ZNF575Q86XF7 245 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 C14orf178Q8N769 122 aaPredicted RBP6.77□□□□□ -1.33
NR1I3-220ENST00000505005 RMI2Q96E14 147 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 TM2D2Q9BX73 214 aa6.77□□□□□ -1.33
NR1I3-220ENST00000505005 TRAV8-3A0A0A6YYJ7 113 aa6.76□□□□□ -1.33
NR1I3-220ENST00000505005 PRSS29PA6NIE9 313 aa6.76□□□□□ -1.33
NR1I3-220ENST00000505005 SAMD10Q9BYL1 202 aa6.76□□□□□ -1.33
NR1I3-220ENST00000505005 NIT2Q9NQR4 276 aa6.76□□□□□ -1.33
NR1I3-220ENST00000505005 A0A087WX48 190 aa6.75□□□□□ -1.33
NR1I3-220ENST00000505005 UBE2D3P61077 147 aa6.75□□□□□ -1.33
NR1I3-220ENST00000505005 UBE2D2P62837 147 aa6.75□□□□□ -1.33
NR1I3-220ENST00000505005 SMAGPQ0VAQ4 97 aa6.75□□□□□ -1.33
NR1I3-220ENST00000505005 GNB1LQ9BYB4 327 aa6.75□□□□□ -1.33
NR1I3-220ENST00000505005 JPT2Q9H910 190 aa6.75□□□□□ -1.33
NR1I3-220ENST00000505005 KIF25-AS1Q9Y6Z4 181 aa6.75□□□□□ -1.33
NR1I3-220ENST00000505005 TRBV25-1A0A075B6N4 114 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 TGIF2-C20orf24A0A0A6YYL0 155 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 HIGD1CA8MV81 97 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 C1orf196B1AJZ1 125 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 TCAPO15273 167 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 MGPP08493 103 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 LINC00694P0DN24 101 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 GZMBP10144 247 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 Q0VG73 95 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 TMEM191AQ9H0A3 160 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 MSRB1Q9NZV6 116 aa6.74□□□□□ -1.33
NR1I3-220ENST00000505005 TRBV6-8A0A0A6YYG3 113 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 LOC100131303A0A0U1RQF7 123 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 A0A1B0GXF2 115 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 IBA57-AS1B1ANH7 110 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 M0QY20 66 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 NCR2O95944 276 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 HLA-DQA1P01909 254 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 RPS10P46783 165 aaKnown RBP6.73□□□□□ -1.33
NR1I3-220ENST00000505005 RAB5BP61020 215 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 SSTP61278 116 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 HBBP68871 147 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 GATD1Q8NB37 220 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 NEXN-AS1Q8NBZ9 246 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 NUP35Q8NFH5 326 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 PGLYRP4Q96LB8 373 aa6.73□□□□□ -1.33
NR1I3-220ENST00000505005 DNAH1Q9P2D7 4330 aa6.72□□□□□ -1.33
NR1I3-220ENST00000505005 IGHV1-24A0A0C4DH33 117 aa6.72□□□□□ -1.33
NR1I3-220ENST00000505005 H7C423 109 aa6.72□□□□□ -1.33
NR1I3-220ENST00000505005 PSCAO43653 123 aa6.72□□□□□ -1.33
NR1I3-220ENST00000505005 LCE2AQ5TA79 106 aaPredicted RBP6.72□□□□□ -1.33
NR1I3-220ENST00000505005 Q6ZSN1 163 aa6.72□□□□□ -1.33
NR1I3-220ENST00000505005 GTSF1Q8WW33 167 aa6.72□□□□□ -1.33
NR1I3-220ENST00000505005 MRAP2Q96G30 205 aa6.72□□□□□ -1.33
NR1I3-220ENST00000505005 SACSQ9NZJ4 4579 aa6.72□□□□□ -1.33
NR1I3-220ENST00000505005 KMT2AQ03164 3969 aa6.71□□□□□ -1.34
NR1I3-220ENST00000505005 MUC21A0A0G2JKD1 596 aa6.71□□□□□ -1.34
NR1I3-220ENST00000505005 MUC21A0A140T8X8 626 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms