RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 RPL36ALQ969Q0 106 aaKnown RBP8.58□□□□□ -1.04
DDX41-204ENST00000504807 PKHD1L1Q86WI1 4243 aa8.58□□□□□ -1.04
DDX41-204ENST00000504807 IGKV2D-24A0A075B6R9 120 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 TRBV6-8A0A0A6YYG3 113 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 C19orf71A6NCJ1 209 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 PFDN1O60925 122 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 OXTP01178 125 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 S100A9P06702 114 aaKnown RBP8.57□□□□□ -1.04
DDX41-204ENST00000504807 IGLC6P0CF74 106 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 CENPWQ5EE01 88 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 Q8N976 141 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 BOLA1Q9Y3E2 137 aa8.57□□□□□ -1.04
DDX41-204ENST00000504807 TRAV1-1A0A0B4J248 108 aa8.56□□□□□ -1.04
DDX41-204ENST00000504807 KRTAP10-4P60372 401 aaPredicted RBP8.56□□□□□ -1.04
DDX41-204ENST00000504807 LINC00528Q8N1L1 170 aa8.56□□□□□ -1.04
DDX41-204ENST00000504807 KRTAP9-2Q9BYQ4 174 aa8.56□□□□□ -1.04
DDX41-204ENST00000504807 SPANXN1Q5VSR9 72 aa8.55□□□□□ -1.04
DDX41-204ENST00000504807 KRTAP26-1Q6PEX3 210 aa8.55□□□□□ -1.04
DDX41-204ENST00000504807 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
DDX41-204ENST00000504807 C15orf54Q8N8G6 183 aa8.55□□□□□ -1.04
DDX41-204ENST00000504807 A0A087WX48 190 aa8.54□□□□□ -1.04
DDX41-204ENST00000504807 SULT1A2P50226 295 aa8.54□□□□□ -1.04
DDX41-204ENST00000504807 TOR2AQ5JU69 321 aa8.54□□□□□ -1.04
DDX41-204ENST00000504807 MANBALQ9NQG1 85 aa8.54□□□□□ -1.04
DDX41-204ENST00000504807 URGCP-MRPS24S4R325 110 aa8.54□□□□□ -1.04
DDX41-204ENST00000504807 TMEM262E9PQX1 116 aa8.53□□□□□ -1.04
DDX41-204ENST00000504807 SUMO4Q6EEV6 95 aa8.53□□□□□ -1.04
DDX41-204ENST00000504807 CLPSL2Q6UWE3 100 aa8.53□□□□□ -1.04
DDX41-204ENST00000504807 CHCHD7Q9BUK0 85 aa8.53□□□□□ -1.04
DDX41-204ENST00000504807 TPPP3Q9BW30 176 aa8.53□□□□□ -1.04
DDX41-204ENST00000504807 VAX2Q9UIW0 290 aa8.53□□□□□ -1.04
DDX41-204ENST00000504807 F5H697 171 aa8.52□□□□□ -1.05
DDX41-204ENST00000504807 M0QY20 66 aa8.52□□□□□ -1.05
DDX41-204ENST00000504807 GAGE6Q13070 117 aa8.52□□□□□ -1.05
DDX41-204ENST00000504807 FER1L6-AS1Q8NA97 138 aa8.52□□□□□ -1.05
DDX41-204ENST00000504807 OR2D3Q8NGH3 330 aa8.52□□□□□ -1.05
DDX41-204ENST00000504807 GFRA4Q9GZZ7 299 aa8.52□□□□□ -1.05
DDX41-204ENST00000504807 K7EN84 100 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 ANGP03950 147 aaKnown RBP8.51□□□□□ -1.05
DDX41-204ENST00000504807 MGPP08493 103 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 RBX1P62877 108 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 EIF5AP63241 154 aaKnown RBP8.51□□□□□ -1.05
DDX41-204ENST00000504807 MEF2BQ02080 365 aaPredicted RBP8.51□□□□□ -1.05
DDX41-204ENST00000504807 TCTE3Q8IZS6 198 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 CIRBP-AS1Q8TBR5 109 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 AP1S3Q96PC3 154 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 CHCHD5Q9BSY4 110 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 PRR34Q9NV39 138 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 COX11Q9Y6N1 276 aa8.51□□□□□ -1.05
DDX41-204ENST00000504807 KRTAP9-6A0A140TA67 174 aa8.5□□□□□ -1.05
DDX41-204ENST00000504807 PANO1I0J062 215 aa8.5□□□□□ -1.05
DDX41-204ENST00000504807 BCL2P10415 239 aa8.5□□□□□ -1.05
DDX41-204ENST00000504807 GNG4P50150 75 aa8.5□□□□□ -1.05
DDX41-204ENST00000504807 LYZL1Q6UWQ5 148 aa8.5□□□□□ -1.05
DDX41-204ENST00000504807 RMI2Q96E14 147 aa8.5□□□□□ -1.05
DDX41-204ENST00000504807 USP17L23D6RBM5 183 aa8.49□□□□□ -1.05
DDX41-204ENST00000504807 HLA-DQA1P01909 254 aa8.49□□□□□ -1.05
DDX41-204ENST00000504807 PRSS1P07477 247 aa8.49□□□□□ -1.05
DDX41-204ENST00000504807 NKX2-5P52952 324 aaPredicted RBP8.49□□□□□ -1.05
DDX41-204ENST00000504807 LINC00269Q8N2A0 174 aa8.49□□□□□ -1.05
DDX41-204ENST00000504807 C20orf203Q8NBC4 194 aa8.49□□□□□ -1.05
DDX41-204ENST00000504807 MED9Q9NWA0 146 aa8.49□□□□□ -1.05
DDX41-204ENST00000504807 IGLV4-60A0A075B6I1 120 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 RAB5CP51148 216 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 FOXA3P55318 350 aaPredicted RBP8.48□□□□□ -1.05
DDX41-204ENST00000504807 Q0VG73 95 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 ELOBQ15370 118 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 IQCJQ1A5X6 159 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 Q6ZNX1 250 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 C9orf62Q8N4C0 152 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 NUDT10Q8NFP7 164 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 NUDT11Q96G61 164 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 CHAC1Q9BUX1 264 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 C1orf43Q9BWL3 253 aa8.48□□□□□ -1.05
DDX41-204ENST00000504807 RNASE7Q9H1E1 156 aaKnown RBP8.48□□□□□ -1.05
DDX41-204ENST00000504807 NTF3P20783 257 aa8.47□□□□□ -1.05
DDX41-204ENST00000504807 CTRLP40313 264 aa8.47□□□□□ -1.05
DDX41-204ENST00000504807 IGLV10-54A0A075B6I4 117 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 TRAV26-2A0A0B4J265 109 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 PDE6DO43924 150 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 P01737 135 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 CRPP02741 224 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 SMIM17P0DL12 118 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 SLC51BQ86UW2 128 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 OCC1Q8TAD7 63 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 GTSF1Q8WW33 167 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 SMIM12Q96EX1 92 aa8.46□□□□□ -1.06
DDX41-204ENST00000504807 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.46□□□□□ -1.06
DDX41-204ENST00000504807 IGHV1-24A0A0C4DH33 117 aa8.45□□□□□ -1.06
DDX41-204ENST00000504807 HNRNPA3P51991 378 aaKnown RBP8.45□□□□□ -1.06
DDX41-204ENST00000504807 RPS20P60866 119 aaKnown RBP8.45□□□□□ -1.06
DDX41-204ENST00000504807 CACNG7P62955 275 aa8.45□□□□□ -1.06
DDX41-204ENST00000504807 MIAQ16674 131 aa8.45□□□□□ -1.06
DDX41-204ENST00000504807 KCNIP4Q6PIL6 250 aa8.45□□□□□ -1.06
DDX41-204ENST00000504807 RASL11AQ6T310 242 aa8.45□□□□□ -1.06
DDX41-204ENST00000504807 DAZAP1Q96EP5 407 aaKnown RBP8.45□□□□□ -1.06
DDX41-204ENST00000504807 hCG_2014768A0A024R1R8 64 aa8.44□□□□□ -1.06
DDX41-204ENST00000504807 TRBV25-1A0A075B6N4 114 aa8.44□□□□□ -1.06
DDX41-204ENST00000504807 IFNA1P01562 189 aa8.44□□□□□ -1.06
DDX41-204ENST00000504807 SLPIP03973 132 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms