RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 KRTAP17-1Q9BYP8 105 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 EIF5A2Q9GZV4 153 aaKnown RBP9.53□□□□□ -0.88
HOXC9-202ENST00000504557 KLK12Q9UKR0 248 aa9.53□□□□□ -0.88
HOXC9-202ENST00000504557 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.52□□□□□ -0.89
HOXC9-202ENST00000504557 RPP21Q9H633 154 aaKnown RBP9.52□□□□□ -0.89
HOXC9-202ENST00000504557 KIF25-AS1Q9Y6Z4 181 aa9.52□□□□□ -0.89
HOXC9-202ENST00000504557 PCLOQ9Y6V0 5065 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 TRAV8-3A0A0A6YYJ7 113 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 LRCOL1A6NCL2 159 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 NTF3P20783 257 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 LAGE3Q14657 143 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 DEFB104AQ8WTQ1 72 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 CHCHD5Q9BSY4 110 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 TM2D2Q9BX73 214 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 KRTAP4-5Q9BYR2 181 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 LRP1BQ9NZR2 4599 aa9.51□□□□□ -0.89
HOXC9-202ENST00000504557 IGKV2D-24A0A075B6R9 120 aa9.5□□□□□ -0.89
HOXC9-202ENST00000504557 IGLV5-52A0A0A0MRZ9 124 aa9.5□□□□□ -0.89
HOXC9-202ENST00000504557 TRBV6-8A0A0A6YYG3 113 aa9.5□□□□□ -0.89
HOXC9-202ENST00000504557 F2Z2F3 143 aa9.5□□□□□ -0.89
HOXC9-202ENST00000504557 TWIST1Q15672 202 aa9.5□□□□□ -0.89
HOXC9-202ENST00000504557 SUMO4Q6EEV6 95 aa9.5□□□□□ -0.89
HOXC9-202ENST00000504557 CDPF1Q6NVV7 123 aa9.5□□□□□ -0.89
HOXC9-202ENST00000504557 UBE2WQ96B02 151 aa9.5□□□□□ -0.89
HOXC9-202ENST00000504557 TMEM250H0YL14 139 aa9.49□□□□□ -0.89
HOXC9-202ENST00000504557 GATCO43716 136 aaKnown RBP9.49□□□□□ -0.89
HOXC9-202ENST00000504557 TRGC1P0CF51 173 aa9.49□□□□□ -0.89
HOXC9-202ENST00000504557 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
HOXC9-202ENST00000504557 WFDC2Q14508 124 aa9.49□□□□□ -0.89
HOXC9-202ENST00000504557 C15orf54Q8N8G6 183 aa9.49□□□□□ -0.89
HOXC9-202ENST00000504557 DNAH5Q8TE73 4624 aa9.49□□□□□ -0.89
HOXC9-202ENST00000504557 HSPG2P98160 4391 aa9.49□□□□□ -0.89
HOXC9-202ENST00000504557 GCSHP23434 173 aa9.48□□□□□ -0.89
HOXC9-202ENST00000504557 HAMPP81172 84 aa9.48□□□□□ -0.89
HOXC9-202ENST00000504557 MPV17L2Q567V2 206 aa9.48□□□□□ -0.89
HOXC9-202ENST00000504557 Q8N814 137 aa9.48□□□□□ -0.89
HOXC9-202ENST00000504557 LYPD6BQ8NI32 183 aa9.48□□□□□ -0.89
HOXC9-202ENST00000504557 BAALCQ8WXS3 180 aa9.48□□□□□ -0.89
HOXC9-202ENST00000504557 SMIM7Q9BQ49 75 aa9.48□□□□□ -0.89
HOXC9-202ENST00000504557 DPH3P1Q9H4G8 78 aa9.48□□□□□ -0.89
HOXC9-202ENST00000504557 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.47□□□□□ -0.89
HOXC9-202ENST00000504557 H7C1H1 209 aa9.47□□□□□ -0.89
HOXC9-202ENST00000504557 M0QY20 66 aa9.47□□□□□ -0.89
HOXC9-202ENST00000504557 ANGP03950 147 aaKnown RBP9.47□□□□□ -0.89
HOXC9-202ENST00000504557 CTRLP40313 264 aa9.47□□□□□ -0.89
HOXC9-202ENST00000504557 GAGE6Q13070 117 aa9.47□□□□□ -0.89
HOXC9-202ENST00000504557 NTM-AS1Q6ZSK4 140 aa9.47□□□□□ -0.89
HOXC9-202ENST00000504557 RMI2Q96E14 147 aa9.47□□□□□ -0.89
HOXC9-202ENST00000504557 PGLYRP4Q96LB8 373 aa9.47□□□□□ -0.89
HOXC9-202ENST00000504557 FAM210AQ96ND0 272 aa9.47□□□□□ -0.89
HOXC9-202ENST00000504557 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.9
HOXC9-202ENST00000504557 ZNF727A8MUV8 499 aa9.46□□□□□ -0.9
HOXC9-202ENST00000504557 CRPP02741 224 aa9.46□□□□□ -0.9
HOXC9-202ENST00000504557 ELOBQ15370 118 aa9.46□□□□□ -0.9
HOXC9-202ENST00000504557 RASL11AQ6T310 242 aa9.46□□□□□ -0.9
HOXC9-202ENST00000504557 CLPSL2Q6UWE3 100 aa9.46□□□□□ -0.9
HOXC9-202ENST00000504557 Q8N976 141 aa9.46□□□□□ -0.9
HOXC9-202ENST00000504557 GTSF1Q8WW33 167 aa9.46□□□□□ -0.9
HOXC9-202ENST00000504557 TRBV25-1A0A075B6N4 114 aa9.45□□□□□ -0.9
HOXC9-202ENST00000504557 ATRAIDQ6UW56 229 aa9.45□□□□□ -0.9
HOXC9-202ENST00000504557 APOBP04114 4563 aaKnown RBP9.44□□□□□ -0.9
HOXC9-202ENST00000504557 SRP19P09132 144 aaKnown RBP9.44□□□□□ -0.9
HOXC9-202ENST00000504557 FOXA3P55318 350 aaPredicted RBP9.44□□□□□ -0.9
HOXC9-202ENST00000504557 TMEM97Q5BJF2 176 aa9.44□□□□□ -0.9
HOXC9-202ENST00000504557 CHCHD7Q9BUK0 85 aa9.44□□□□□ -0.9
HOXC9-202ENST00000504557 IGHV1-24A0A0C4DH33 117 aa9.43□□□□□ -0.9
HOXC9-202ENST00000504557 A8MWL6 223 aa9.43□□□□□ -0.9
HOXC9-202ENST00000504557 SMIM15Q7Z3B0 74 aa9.43□□□□□ -0.9
HOXC9-202ENST00000504557 Q8N1X5 172 aa9.43□□□□□ -0.9
HOXC9-202ENST00000504557 NTN5Q8WTR8 489 aaPredicted RBP9.43□□□□□ -0.9
HOXC9-202ENST00000504557 C1orf43Q9BWL3 253 aa9.43□□□□□ -0.9
HOXC9-202ENST00000504557 NIT2Q9NQR4 276 aa9.43□□□□□ -0.9
HOXC9-202ENST00000504557 COX11Q9Y6N1 276 aa9.43□□□□□ -0.9
HOXC9-202ENST00000504557 HLA-DQA1P01909 254 aa9.42□□□□□ -0.9
HOXC9-202ENST00000504557 RBX1P62877 108 aa9.42□□□□□ -0.9
HOXC9-202ENST00000504557 Q0VG73 95 aa9.42□□□□□ -0.9
HOXC9-202ENST00000504557 WDR73Q6P4I2 378 aa9.42□□□□□ -0.9
HOXC9-202ENST00000504557 ENHOQ6UWT2 76 aa9.42□□□□□ -0.9
HOXC9-202ENST00000504557 FAM231DQ6ZW35 169 aa9.42□□□□□ -0.9
HOXC9-202ENST00000504557 LINC01551Q86U37 167 aa9.42□□□□□ -0.9
HOXC9-202ENST00000504557 BORCS7Q96B45 105 aa9.42□□□□□ -0.9
HOXC9-202ENST00000504557 ABCA13Q86UQ4 5058 aa9.41□□□□□ -0.9
HOXC9-202ENST00000504557 XGP55808 180 aa9.41□□□□□ -0.9
HOXC9-202ENST00000504557 PKIAP61925 76 aa9.41□□□□□ -0.9
HOXC9-202ENST00000504557 LINC01620Q4KN68 170 aa9.41□□□□□ -0.9
HOXC9-202ENST00000504557 LINC00269Q8N2A0 174 aa9.41□□□□□ -0.9
HOXC9-202ENST00000504557 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
HOXC9-202ENST00000504557 RPL39LQ96EH5 51 aaKnown RBP9.41□□□□□ -0.9
HOXC9-202ENST00000504557 CNFNQ9BYD5 112 aa9.41□□□□□ -0.9
HOXC9-202ENST00000504557 SMR3BP02814 79 aaPredicted RBP9.4□□□□□ -0.9
HOXC9-202ENST00000504557 SRSF3P84103 164 aaKnown RBP9.4□□□□□ -0.9
HOXC9-202ENST00000504557 TEX261Q6UWH6 196 aa9.4□□□□□ -0.9
HOXC9-202ENST00000504557 TMEM243Q9BU79 118 aa9.4□□□□□ -0.9
HOXC9-202ENST00000504557 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
HOXC9-202ENST00000504557 C9JQL5 133 aa9.39□□□□□ -0.91
HOXC9-202ENST00000504557 UBE2L6O14933 153 aa9.39□□□□□ -0.91
HOXC9-202ENST00000504557 AMTP48728 403 aa9.39□□□□□ -0.91
HOXC9-202ENST00000504557 COTL1Q14019 142 aa9.39□□□□□ -0.91
HOXC9-202ENST00000504557 ADIRFQ15847 76 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms