RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 TRBV7-9A0A0J9YWB2 115 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 MUC21A0A140T8X8 626 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 RBAKDNA6NC62 111 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 TRIAP1O43715 76 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 SEC11BP0C7V7 166 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 TAS2R30P59541 319 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 SEC61GP60059 68 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 UBE2D3P61077 147 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 SSTP61278 116 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 CNBPP62633 177 aaKnown RBP2.22□□□□□ -2.05
USP46-205ENST00000504078 UBE2D2P62837 147 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 RBX1P62877 108 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 CACNG7P62955 275 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 COTL1Q14019 142 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 ELOBQ15370 118 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 LRRC37A5PQ49AS3 106 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 KHDC3LQ587J8 217 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 PRR27Q6MZM9 219 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 UFSP1Q6NVU6 142 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 SPINK6Q6UWN8 80 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 PRNTQ86SH4 94 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 STX12Q86Y82 276 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 TMEM252Q8N6L7 170 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 C15orf56Q8N910 161 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 INO80EQ8NBZ0 244 aaPredicted RBP2.22□□□□□ -2.05
USP46-205ENST00000504078 NEXN-AS1Q8NBZ9 246 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 OR10G7Q8NGN6 311 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 RNF185Q96GF1 192 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 KCNS1Q96KK3 526 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 ALKBH7Q9BT30 221 aaPredicted RBP2.22□□□□□ -2.05
USP46-205ENST00000504078 NDFIP1Q9BT67 221 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 GGACTQ9BVM4 153 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 SLIRPQ9GZT3 109 aaKnown RBP2.22□□□□□ -2.05
USP46-205ENST00000504078 C11orf1Q9H5F2 150 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 NUDT15Q9NV35 164 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 CRCT1Q9UGL9 99 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 RSL24D1Q9UHA3 163 aaKnown RBP2.22□□□□□ -2.05
USP46-205ENST00000504078 V9GYH0 126 aa2.22□□□□□ -2.05
USP46-205ENST00000504078 IGLV4-60A0A075B6I1 120 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 TRBV6-8A0A0A6YYG3 113 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.21□□□□□ -2.06
USP46-205ENST00000504078 IGKV3D-20A0A0C4DH25 116 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 A8MWV9 139 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 TEX46H3BTG2 121 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 ATP6V1G1O75348 118 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 NDUFS6O75380 124 aaKnown RBP2.21□□□□□ -2.06
USP46-205ENST00000504078 NDUFB6O95139 128 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 BTCP35070 178 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 SULT1A1P50225 295 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 FGF8P55075 233 aaPredicted RBP2.21□□□□□ -2.06
USP46-205ENST00000504078 DEFA1P59665 94 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 AP3S2P59780 193 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 RAB2AP61019 212 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 HBG1P69891 147 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 HBG2P69892 147 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 RPL36AP83881 106 aaKnown RBP2.21□□□□□ -2.06
USP46-205ENST00000504078 REG3AQ06141 175 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 MIAQ16674 131 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 ZFP69Q49AA0 526 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 NTM-AS1Q6ZSK4 140 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 OR11H4Q8NGC9 324 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 OR10G9Q8NGN4 311 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 OR5C1Q8NGR4 320 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 SLC25A21Q9BQT8 299 aaPredicted RBP2.21□□□□□ -2.06
USP46-205ENST00000504078 CHCHD7Q9BUK0 85 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 SMIM3Q9BZL3 60 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 GEMIN7Q9H840 131 aaKnown RBP2.21□□□□□ -2.06
USP46-205ENST00000504078 OTORQ9NRC9 128 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 LYRM2Q9NU23 88 aaPredicted RBP2.21□□□□□ -2.06
USP46-205ENST00000504078 VAX2Q9UIW0 290 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 PSG8Q9UQ74 426 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 LENEPQ9Y5L5 61 aa2.21□□□□□ -2.06
USP46-205ENST00000504078 TRBV7-3A0A075B6L6 115 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 FAM231BA6NCW3 169 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 B4DEV8 164 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 H3BMQ9 156 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 RHODO00212 210 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 TAAR5O14804 337 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 SIX6O95475 246 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 TSPAN13O95857 204 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 MGPP08493 103 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 ARMS2P0C7Q2 107 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 ARL14EPLP0DKL9 152 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 PVALBP20472 110 aaPredicted RBP2.2□□□□□ -2.06
USP46-205ENST00000504078 MT3P25713 68 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 S100A11P31949 105 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 CYCSP99999 105 aaKnown RBP2.2□□□□□ -2.06
USP46-205ENST00000504078 FLI1Q01543 452 aaPredicted RBP2.2□□□□□ -2.06
USP46-205ENST00000504078 TRIQKQ629K1 86 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 ZFP2Q6ZN57 461 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 Q86TA4 180 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 C20orf203Q8NBC4 194 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 RETNLBQ9BQ08 111 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 WDR61Q9GZS3 305 aaKnown RBP2.2□□□□□ -2.06
USP46-205ENST00000504078 PRR34Q9NV39 138 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 OR5AC2Q9NZP5 309 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 MBD2Q9UBB5 411 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 PHLDA3Q9Y5J5 127 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 ARL2-SNX15V9GYD0 113 aa2.2□□□□□ -2.06
USP46-205ENST00000504078 OBSCNQ5VST9 7968 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms