RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 Q8N3U1 123 aa8.01□□□□□ -1.13
THBS3-209ENST00000498500 KIF25-AS1Q9Y6Z4 181 aa8.01□□□□□ -1.13
THBS3-209ENST00000498500 TRAV8-6A0A0B4J262 113 aa8□□□□□ -1.13
THBS3-209ENST00000498500 TRBV10-1A0A0K0K1A3 114 aa8□□□□□ -1.13
THBS3-209ENST00000498500 P01737 135 aa8□□□□□ -1.13
THBS3-209ENST00000498500 RPS20P60866 119 aaKnown RBP8□□□□□ -1.13
THBS3-209ENST00000498500 TOR2AQ5JU69 321 aa8□□□□□ -1.13
THBS3-209ENST00000498500 SPANXN1Q5VSR9 72 aa8□□□□□ -1.13
THBS3-209ENST00000498500 FER1L6-AS1Q8NA97 138 aa8□□□□□ -1.13
THBS3-209ENST00000498500 OR10G8Q8NGN5 311 aa8□□□□□ -1.13
THBS3-209ENST00000498500 Q9HAA7 133 aa8□□□□□ -1.13
THBS3-209ENST00000498500 CTRLP40313 264 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 RAB4BP61018 213 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 UBE2D3P61077 147 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 UBE2D2P62837 147 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 ZNF56Q15929 161 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 NEXN-AS1Q8NBZ9 246 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 NUDT10Q8NFP7 164 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 OCC1Q8TAD7 63 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 DAZAP1Q96EP5 407 aaKnown RBP7.99□□□□□ -1.13
THBS3-209ENST00000498500 NUDT11Q96G61 164 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 AP1S3Q96PC3 154 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 BIN3Q9NQY0 253 aa7.99□□□□□ -1.13
THBS3-209ENST00000498500 IBA57-AS1B1ANH7 110 aa7.98□□□□□ -1.13
THBS3-209ENST00000498500 NDUFS6O75380 124 aaKnown RBP7.98□□□□□ -1.13
THBS3-209ENST00000498500 OXTP01178 125 aa7.98□□□□□ -1.13
THBS3-209ENST00000498500 IGHV3-30P01768 117 aa7.98□□□□□ -1.13
THBS3-209ENST00000498500 IGHV3-33P01772 117 aa7.98□□□□□ -1.13
THBS3-209ENST00000498500 IGHV3-30-3P0DP02 117 aa7.98□□□□□ -1.13
THBS3-209ENST00000498500 IGHV3-30-5P0DP03 117 aa7.98□□□□□ -1.13
THBS3-209ENST00000498500 RNASE7Q9H1E1 156 aaKnown RBP7.98□□□□□ -1.13
THBS3-209ENST00000498500 RPP21Q9H633 154 aaKnown RBP7.98□□□□□ -1.13
THBS3-209ENST00000498500 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
THBS3-209ENST00000498500 SSTP61278 116 aa7.97□□□□□ -1.13
THBS3-209ENST00000498500 RPL36AP83881 106 aaKnown RBP7.97□□□□□ -1.13
THBS3-209ENST00000498500 LYZL1Q6UWQ5 148 aa7.97□□□□□ -1.13
THBS3-209ENST00000498500 RPL36ALQ969Q0 106 aaKnown RBP7.97□□□□□ -1.13
THBS3-209ENST00000498500 TPPP3Q9BW30 176 aa7.97□□□□□ -1.13
THBS3-209ENST00000498500 TRBV7-3A0A075B6L6 115 aa7.96□□□□□ -1.14
THBS3-209ENST00000498500 A0A087WWC5 75 aa7.96□□□□□ -1.14
THBS3-209ENST00000498500 XKRY2A2RUG3 117 aa7.96□□□□□ -1.14
THBS3-209ENST00000498500 CACNG7P62955 275 aa7.96□□□□□ -1.14
THBS3-209ENST00000498500 Q6ZSA8 131 aa7.96□□□□□ -1.14
THBS3-209ENST00000498500 CNFNQ9BYD5 112 aa7.96□□□□□ -1.14
THBS3-209ENST00000498500 F2Z2F3 143 aa7.95□□□□□ -1.14
THBS3-209ENST00000498500 SRP19P09132 144 aaKnown RBP7.95□□□□□ -1.14
THBS3-209ENST00000498500 LAGE3Q14657 143 aa7.95□□□□□ -1.14
THBS3-209ENST00000498500 FAM231DQ6ZW35 169 aa7.95□□□□□ -1.14
THBS3-209ENST00000498500 NIT1Q86X76 327 aa7.95□□□□□ -1.14
THBS3-209ENST00000498500 GTSF1Q8WW33 167 aa7.95□□□□□ -1.14
THBS3-209ENST00000498500 MGPP08493 103 aa7.94□□□□□ -1.14
THBS3-209ENST00000498500 CEBPGP53567 150 aa7.94□□□□□ -1.14
THBS3-209ENST00000498500 SUMO4Q6EEV6 95 aa7.94□□□□□ -1.14
THBS3-209ENST00000498500 TEX261Q6UWH6 196 aa7.94□□□□□ -1.14
THBS3-209ENST00000498500 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
THBS3-209ENST00000498500 DAZ4Q86SG3 579 aaKnown RBP7.94□□□□□ -1.14
THBS3-209ENST00000498500 SMIM7Q9BQ49 75 aa7.94□□□□□ -1.14
THBS3-209ENST00000498500 TM2D2Q9BX73 214 aa7.94□□□□□ -1.14
THBS3-209ENST00000498500 EIF5A2Q9GZV4 153 aaKnown RBP7.94□□□□□ -1.14
THBS3-209ENST00000498500 DAZ3Q9NR90 486 aaKnown RBP7.94□□□□□ -1.14
THBS3-209ENST00000498500 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.93□□□□□ -1.14
THBS3-209ENST00000498500 C9JQL5 133 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 F5H697 171 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 M0QY20 66 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 TRGC1P0CF51 173 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 SMIM17P0DL12 118 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 NTF3P20783 257 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 WFDC2Q14508 124 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 WDR73Q6P4I2 378 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 LINC01551Q86U37 167 aa7.93□□□□□ -1.14
THBS3-209ENST00000498500 TRBV6-8A0A0A6YYG3 113 aa7.92□□□□□ -1.14
THBS3-209ENST00000498500 LECT2O14960 151 aa7.92□□□□□ -1.14
THBS3-209ENST00000498500 GATCO43716 136 aaKnown RBP7.92□□□□□ -1.14
THBS3-209ENST00000498500 LINC01620Q4KN68 170 aa7.92□□□□□ -1.14
THBS3-209ENST00000498500 CT83Q5H943 113 aa7.92□□□□□ -1.14
THBS3-209ENST00000498500 NTM-AS1Q6ZSK4 140 aa7.92□□□□□ -1.14
THBS3-209ENST00000498500 DPH3P1Q9H4G8 78 aa7.92□□□□□ -1.14
THBS3-209ENST00000498500 ZNF727A8MUV8 499 aa7.91□□□□□ -1.14
THBS3-209ENST00000498500 SRSF3P84103 164 aaKnown RBP7.91□□□□□ -1.14
THBS3-209ENST00000498500 DNAJC30Q96LL9 226 aa7.91□□□□□ -1.14
THBS3-209ENST00000498500 CHCHD7Q9BUK0 85 aa7.91□□□□□ -1.14
THBS3-209ENST00000498500 KRTAP10-4P60372 401 aaPredicted RBP7.9□□□□□ -1.14
THBS3-209ENST00000498500 A8MWL6 223 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 H7C1H1 209 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 TWIST1Q15672 202 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 MPV17L2Q567V2 206 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 RASL11AQ6T310 242 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 ISOC2Q96AB3 205 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 PGLYRP4Q96LB8 373 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 CHAC1Q9BUX1 264 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 OSTCQ9NRP0 149 aa7.89□□□□□ -1.15
THBS3-209ENST00000498500 PKHD1L1Q86WI1 4243 aa7.88□□□□□ -1.15
THBS3-209ENST00000498500 TRAV8-3A0A0A6YYJ7 113 aa7.88□□□□□ -1.15
THBS3-209ENST00000498500 FOXA3P55318 350 aaPredicted RBP7.88□□□□□ -1.15
THBS3-209ENST00000498500 RPL23P62829 140 aaKnown RBP7.88□□□□□ -1.15
THBS3-209ENST00000498500 ATRAIDQ6UW56 229 aa7.88□□□□□ -1.15
THBS3-209ENST00000498500 TSKUQ8WUA8 353 aa7.88□□□□□ -1.15
THBS3-209ENST00000498500 KLK12Q9UKR0 248 aa7.88□□□□□ -1.15
THBS3-209ENST00000498500 URGCP-MRPS24S4R325 110 aa7.88□□□□□ -1.15
THBS3-209ENST00000498500 V9GYV3 84 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms