RNA–Protein interactions for RNA: ENST00000497542.1

NT5C3A-212, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 4

Gene NT5C3A, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-212ENST00000497542 VPS8Q8N3P4 1428 aa1.4□□□□□ -2.18
NT5C3A-212ENST00000497542 RBBP6Q7Z6E9 1792 aaKnown RBP1.4□□□□□ -2.19
NT5C3A-212ENST00000497542 IFITM1P13164 125 aa1.4□□□□□ -2.19
NT5C3A-212ENST00000497542 CCL3L1P16619 93 aa1.4□□□□□ -2.19
NT5C3A-212ENST00000497542 RBM3P98179 157 aaKnown RBP1.4□□□□□ -2.19
NT5C3A-212ENST00000497542 HSD52Q0P140 79 aa1.4□□□□□ -2.19
NT5C3A-212ENST00000497542 C5orf38Q86SI9 138 aa1.4□□□□□ -2.19
NT5C3A-212ENST00000497542 ZFYVE16Q7Z3T8 1539 aa1.4□□□□□ -2.19
NT5C3A-212ENST00000497542 COL6A6A6NMZ7 2263 aa1.4□□□□□ -2.19
NT5C3A-212ENST00000497542 TRAV13-2A0A0B4J235 113 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 TMEM218A2RU14 115 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 FAM24AA6NFZ4 105 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 SSSCA1O60232 199 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 SIX6O95475 246 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 Q86TA4 180 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 AQP10Q96PS8 301 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 DSCR8Q96T75 97 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 PLXNA1Q9UIW2 1896 aa1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 CPSF1Q10570 1443 aaKnown RBP1.39□□□□□ -2.19
NT5C3A-212ENST00000497542 KMT2BQ9UMN6 2715 aaPredicted RBP1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 NWD2Q9ULI1 1742 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 CCNB3Q8WWL7 1395 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 TRBV7-1A0A0A6YYK4 115 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 RBAKDNA6NC62 111 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 HCG22E2RYF7 251 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 ATP5EP56381 51 aaPredicted RBP1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 ESPL1Q14674 2120 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 C20orf197Q8N268 126 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 ACBD7Q8N6N7 88 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 COX7B2Q8TF08 81 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 CNTRLQ7Z7A1 2325 aa1.38□□□□□ -2.19
NT5C3A-212ENST00000497542 NRXN2Q9P2S2 1712 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 TRAV30A0A087WSZ9 112 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 UBE2L5PA0A1B0GUS4 154 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 FXYD1O00168 92 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 S100A8P05109 93 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 SPINK8P0C7L1 97 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 ELOF1P60002 83 aaKnown RBP1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 UBE2L3P68036 154 aaKnown RBP1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 FAM74A4Q5TZK3 123 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 COMMD6Q7Z4G1 85 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 TMEM14BQ9NUH8 114 aa1.37□□□□□ -2.19
NT5C3A-212ENST00000497542 PARP14Q460N5 1801 aa1.36□□□□□ -2.19
NT5C3A-212ENST00000497542 PHIPQ8WWQ0 1821 aa1.36□□□□□ -2.19
NT5C3A-212ENST00000497542 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.36□□□□□ -2.19
NT5C3A-212ENST00000497542 CASKIN1Q8WXD9 1431 aa1.36□□□□□ -2.19
NT5C3A-212ENST00000497542 CYP4F30PQ9H0H9 118 aa1.36□□□□□ -2.19
NT5C3A-212ENST00000497542 PXDNQ92626 1479 aa1.36□□□□□ -2.19
NT5C3A-212ENST00000497542 FCGBPQ9Y6R7 5405 aaPredicted RBP1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 ZDBF2Q9HCK1 2354 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 CNTLNQ9NXG0 1405 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 CLPSL1A2RUU4 121 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 DCDP81605 110 aaKnown RBP1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 SPINK13Q1W4C9 94 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 DPH3P1Q9H4G8 78 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 LINC00312Q9Y6C7 94 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 ROS1P08922 2347 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 PATJQ8NI35 1801 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 ROBO1Q9Y6N7 1651 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
NT5C3A-212ENST00000497542 C10orf71Q711Q0 1435 aa1.34□□□□□ -2.19
NT5C3A-212ENST00000497542 LRRC37A3O60309 1634 aa1.34□□□□□ -2.19
NT5C3A-212ENST00000497542 A0A087WTM6 91 aa1.34□□□□□ -2.19
NT5C3A-212ENST00000497542 A0A1W2PPM0 123 aa1.34□□□□□ -2.19
NT5C3A-212ENST00000497542 TMEM262E9PQX1 116 aa1.34□□□□□ -2.19
NT5C3A-212ENST00000497542 H3BQ15 152 aa1.34□□□□□ -2.19
NT5C3A-212ENST00000497542 TTC9CQ8N5M4 171 aa1.34□□□□□ -2.19
NT5C3A-212ENST00000497542 MYH8P13535 1937 aa1.34□□□□□ -2.2
NT5C3A-212ENST00000497542 ARAP2Q8WZ64 1704 aa1.34□□□□□ -2.2
NT5C3A-212ENST00000497542 PPIP5K1Q6PFW1 1433 aa1.33□□□□□ -2.2
NT5C3A-212ENST00000497542 EDDM3BP56851 147 aa1.33□□□□□ -2.2
NT5C3A-212ENST00000497542 V9GYV3 84 aa1.33□□□□□ -2.2
NT5C3A-212ENST00000497542 KNTC1P50748 2209 aa1.33□□□□□ -2.2
NT5C3A-212ENST00000497542 MED13LQ71F56 2210 aa1.32□□□□□ -2.2
NT5C3A-212ENST00000497542 SPHKAPQ2M3C7 1700 aa1.32□□□□□ -2.2
NT5C3A-212ENST00000497542 TNS1Q9HBL0 1735 aaKnown RBP1.32□□□□□ -2.2
NT5C3A-212ENST00000497542 HELZ2Q9BYK8 2649 aaKnown RBP1.32□□□□□ -2.2
NT5C3A-212ENST00000497542 PLAC4Q8WY50 150 aa1.32□□□□□ -2.2
NT5C3A-212ENST00000497542 ABCA1O95477 2261 aa1.31□□□□□ -2.2
NT5C3A-212ENST00000497542 A0A096LNT2 108 aa1.31□□□□□ -2.2
NT5C3A-212ENST00000497542 C10orf128Q5T292 105 aa1.31□□□□□ -2.2
NT5C3A-212ENST00000497542 Q8N6K4 173 aa1.31□□□□□ -2.2
NT5C3A-212ENST00000497542 MYOZ3Q8TDC0 251 aa1.31□□□□□ -2.2
NT5C3A-212ENST00000497542 ARHGAP5Q13017 1502 aa1.3□□□□□ -2.2
NT5C3A-212ENST00000497542 SMARCA2P51531 1590 aa1.3□□□□□ -2.2
NT5C3A-212ENST00000497542 SHROOM2Q13796 1616 aa1.3□□□□□ -2.2
NT5C3A-212ENST00000497542 K7EIL1 84 aa1.3□□□□□ -2.2
NT5C3A-212ENST00000497542 M0R143 59 aa1.3□□□□□ -2.2
NT5C3A-212ENST00000497542 FXYD6P3P58550 94 aa1.3□□□□□ -2.2
NT5C3A-212ENST00000497542 KRTAP10-4P60372 401 aaPredicted RBP1.3□□□□□ -2.2
NT5C3A-212ENST00000497542 DOCK1Q14185 1865 aa1.3□□□□□ -2.2
NT5C3A-212ENST00000497542 MAP2P11137 1827 aaKnown RBP1.29□□□□□ -2.2
NT5C3A-212ENST00000497542 ARFGEF1Q9Y6D6 1849 aa1.29□□□□□ -2.2
NT5C3A-212ENST00000497542 PI4KAP42356 2102 aa1.29□□□□□ -2.2
NT5C3A-212ENST00000497542 RPL37P61927 97 aaKnown RBP1.29□□□□□ -2.2
NT5C3A-212ENST00000497542 LENEPQ9Y5L5 61 aa1.29□□□□□ -2.2
NT5C3A-212ENST00000497542 SCAPERQ9BY12 1400 aa1.29□□□□□ -2.2
NT5C3A-212ENST00000497542 DOCK2Q92608 1830 aa1.29□□□□□ -2.2
NT5C3A-212ENST00000497542 TRBV7-3A0A075B6L6 115 aa1.28□□□□□ -2.2
NT5C3A-212ENST00000497542 S100A10P60903 97 aa1.28□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms