RNA–Protein interactions for RNA: ENST00000496026.1

HDAC9-226, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 860 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-226ENST00000496026 BTF3L4Q96K17 158 aa10.18□□□□□ -0.78
HDAC9-226ENST00000496026 TMEM242Q9NWH2 141 aa10.18□□□□□ -0.78
HDAC9-226ENST00000496026 MRPS16Q9Y3D3 137 aaKnown RBP10.18□□□□□ -0.78
HDAC9-226ENST00000496026 TNFRSF18Q9Y5U5 241 aa10.18□□□□□ -0.78
HDAC9-226ENST00000496026 STARD9Q9P2P6 4700 aa10.17□□□□□ -0.78
HDAC9-226ENST00000496026 A0A1B0GXF2 115 aa10.17□□□□□ -0.78
HDAC9-226ENST00000496026 LINC00694P0DN24 101 aa10.17□□□□□ -0.78
HDAC9-226ENST00000496026 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.17□□□□□ -0.78
HDAC9-226ENST00000496026 GATD1Q8NB37 220 aa10.17□□□□□ -0.78
HDAC9-226ENST00000496026 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
HDAC9-226ENST00000496026 GTSF1LQ9H1H1 148 aa10.17□□□□□ -0.78
HDAC9-226ENST00000496026 NIT2Q9NQR4 276 aa10.17□□□□□ -0.78
HDAC9-226ENST00000496026 RAB4AP20338 218 aa10.16□□□□□ -0.78
HDAC9-226ENST00000496026 UBE2D3P61077 147 aa10.16□□□□□ -0.78
HDAC9-226ENST00000496026 UBE2D2P62837 147 aa10.16□□□□□ -0.78
HDAC9-226ENST00000496026 RNF185Q96GF1 192 aa10.16□□□□□ -0.78
HDAC9-226ENST00000496026 URGCP-MRPS24S4R325 110 aa10.16□□□□□ -0.78
HDAC9-226ENST00000496026 DYNC2H1Q8NCM8 4307 aaKnown RBP10.15□□□□□ -0.78
HDAC9-226ENST00000496026 TRAV9-1A0A075B6T8 112 aa10.15□□□□□ -0.78
HDAC9-226ENST00000496026 TIRAPP58753 221 aa10.15□□□□□ -0.78
HDAC9-226ENST00000496026 FRZBQ92765 325 aa10.15□□□□□ -0.78
HDAC9-226ENST00000496026 MRAP2Q96G30 205 aa10.15□□□□□ -0.78
HDAC9-226ENST00000496026 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
HDAC9-226ENST00000496026 FAM104BQ5XKR9 115 aa10.14□□□□□ -0.79
HDAC9-226ENST00000496026 UPK3BQ9BT76 320 aa10.14□□□□□ -0.79
HDAC9-226ENST00000496026 IGLV2-18A0A075B6J9 118 aa10.13□□□□□ -0.79
HDAC9-226ENST00000496026 TRAV8-6A0A0B4J262 113 aa10.13□□□□□ -0.79
HDAC9-226ENST00000496026 MRPL51Q4U2R6 128 aaKnown RBP10.13□□□□□ -0.79
HDAC9-226ENST00000496026 OR10J3Q5JRS4 329 aa10.13□□□□□ -0.79
HDAC9-226ENST00000496026 LELP1Q5T871 98 aa10.13□□□□□ -0.79
HDAC9-226ENST00000496026 DAZ4Q86SG3 579 aaKnown RBP10.13□□□□□ -0.79
HDAC9-226ENST00000496026 RPL39LQ96EH5 51 aaKnown RBP10.13□□□□□ -0.79
HDAC9-226ENST00000496026 Q9H8V8 135 aa10.13□□□□□ -0.79
HDAC9-226ENST00000496026 DAZ3Q9NR90 486 aaKnown RBP10.13□□□□□ -0.79
HDAC9-226ENST00000496026 SMKR1H3BMG3 65 aa10.12□□□□□ -0.79
HDAC9-226ENST00000496026 NCR2O95944 276 aa10.12□□□□□ -0.79
HDAC9-226ENST00000496026 SIVA1O15304 175 aa10.11□□□□□ -0.79
HDAC9-226ENST00000496026 GAS8-AS1O95177 125 aa10.11□□□□□ -0.79
HDAC9-226ENST00000496026 CKS2P33552 79 aa10.11□□□□□ -0.79
HDAC9-226ENST00000496026 M0R2N4 97 aa10.1□□□□□ -0.79
HDAC9-226ENST00000496026 PPP1R17O96001 155 aa10.1□□□□□ -0.79
HDAC9-226ENST00000496026 TMEM97Q5BJF2 176 aa10.1□□□□□ -0.79
HDAC9-226ENST00000496026 ATRAIDQ6UW56 229 aa10.1□□□□□ -0.79
HDAC9-226ENST00000496026 WFDC10BQ8IUB3 73 aa10.1□□□□□ -0.79
HDAC9-226ENST00000496026 ST20Q9HBF5 79 aa10.1□□□□□ -0.79
HDAC9-226ENST00000496026 TRBV6-5A0A0K0K1A5 114 aa10.09□□□□□ -0.79
HDAC9-226ENST00000496026 RPS10P46783 165 aaKnown RBP10.09□□□□□ -0.79
HDAC9-226ENST00000496026 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
HDAC9-226ENST00000496026 SDHAF1A6NFY7 115 aa10.08□□□□□ -0.8
HDAC9-226ENST00000496026 D6R8Y8 96 aa10.08□□□□□ -0.8
HDAC9-226ENST00000496026 PPBPP02775 128 aa10.08□□□□□ -0.8
HDAC9-226ENST00000496026 TMEM136Q6ZRR5 245 aa10.08□□□□□ -0.8
HDAC9-226ENST00000496026 TRBV25-1A0A075B6N4 114 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 NBDYA0A0U1RRE5 68 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 PMCHP20382 165 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 COTL1Q14019 142 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 ELOBQ15370 118 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 COX19Q49B96 90 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 TTC32Q5I0X7 151 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 ORMDL3Q8N138 153 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 NRACQ8N912 160 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 DEFB104AQ8WTQ1 72 aa10.07□□□□□ -0.8
HDAC9-226ENST00000496026 ALMS1Q8TCU4 4167 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 TRAV9-2A0A087WT02 112 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 TGIF2-C20orf24A0A0A6YYL0 155 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 IGHV1-24A0A0C4DH33 117 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 I3L3M4 83 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 TNFRSF6BO95407 300 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 NTM-AS1Q6ZSK4 140 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 CHCHD5Q9BSY4 110 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 TMEM70Q9BUB7 260 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 GNB1LQ9BYB4 327 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 SMCO4Q9NRQ5 59 aa10.06□□□□□ -0.8
HDAC9-226ENST00000496026 PLECQ15149 4684 aaKnown RBP10.06□□□□□ -0.8
HDAC9-226ENST00000496026 TMEM262E9PQX1 116 aa10.05□□□□□ -0.8
HDAC9-226ENST00000496026 APCSP02743 223 aa10.05□□□□□ -0.8
HDAC9-226ENST00000496026 DNAH10OSP0CZ25 163 aa10.05□□□□□ -0.8
HDAC9-226ENST00000496026 SUMO2P61956 95 aaKnown RBP10.05□□□□□ -0.8
HDAC9-226ENST00000496026 CBLN2Q8IUK8 224 aa10.05□□□□□ -0.8
HDAC9-226ENST00000496026 PRELID3AQ96N28 172 aa10.05□□□□□ -0.8
HDAC9-226ENST00000496026 TRBV24-1A0A075B6N3 115 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 VCYO14598 125 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 NPYP01303 97 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 IGHV3-30P01768 117 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 IGHV3-33P01772 117 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 MT-ND6P03923 174 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 IGHV3-30-3P0DP02 117 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 IGHV3-30-5P0DP03 117 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 AMTP48728 403 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 POLR2KP53803 58 aaKnown RBP10.04□□□□□ -0.8
HDAC9-226ENST00000496026 IQCJQ1A5X6 159 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 LINC01556Q5JQF7 62 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 C20orf78Q9BR46 151 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 TMEM243Q9BU79 118 aa10.04□□□□□ -0.8
HDAC9-226ENST00000496026 A0A087WX48 190 aa10.03□□□□□ -0.8
HDAC9-226ENST00000496026 PHOX2AO14813 284 aa10.03□□□□□ -0.8
HDAC9-226ENST00000496026 Q6ZR54 194 aa10.03□□□□□ -0.8
HDAC9-226ENST00000496026 NIT1Q86X76 327 aa10.03□□□□□ -0.8
HDAC9-226ENST00000496026 TRBV27A0A0K0K1C4 114 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms