RNA–Protein interactions for RNA: ENST00000495311.1

POLR2B-210, Transcript of RNA polymerase II subunit B, humanhuman

TSL 3

Gene POLR2B, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2B-210ENST00000495311 H7C1H1 209 aa7.78□□□□□ -1.16
POLR2B-210ENST00000495311 HBBP68871 147 aa7.78□□□□□ -1.16
POLR2B-210ENST00000495311 KCNIP4Q6PIL6 250 aa7.78□□□□□ -1.16
POLR2B-210ENST00000495311 LINC00476Q8WZB0 136 aa7.78□□□□□ -1.16
POLR2B-210ENST00000495311 RPS10P5Q9NQ39 176 aa7.78□□□□□ -1.16
POLR2B-210ENST00000495311 GYPEP15421 78 aa7.77□□□□□ -1.17
POLR2B-210ENST00000495311 RAB4AP20338 218 aa7.77□□□□□ -1.17
POLR2B-210ENST00000495311 FAM104BQ5XKR9 115 aa7.77□□□□□ -1.17
POLR2B-210ENST00000495311 LGALS9CQ6DKI2 356 aa7.77□□□□□ -1.17
POLR2B-210ENST00000495311 NEGR1Q7Z3B1 354 aa7.77□□□□□ -1.17
POLR2B-210ENST00000495311 RNF185Q96GF1 192 aa7.77□□□□□ -1.17
POLR2B-210ENST00000495311 DNAJC30Q96LL9 226 aa7.77□□□□□ -1.17
POLR2B-210ENST00000495311 Q9UF83 564 aa7.77□□□□□ -1.17
POLR2B-210ENST00000495311 LRP1BQ9NZR2 4599 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 TRBV7-3A0A075B6L6 115 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 F5H697 171 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 NUDT3O95989 172 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 P0DMU3 169 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 FAM231AP0DMU4 169 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 FAM231CP0DMU5 169 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 S100PP25815 95 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 ZNF56Q15929 161 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 SUMO4Q6EEV6 95 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 MRAP2Q96G30 205 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 NIT2Q9NQR4 276 aa7.76□□□□□ -1.17
POLR2B-210ENST00000495311 TRBV6-5A0A0K0K1A5 114 aa7.75□□□□□ -1.17
POLR2B-210ENST00000495311 LOC100131303A0A0U1RQF7 123 aa7.75□□□□□ -1.17
POLR2B-210ENST00000495311 SRIP30626 198 aa7.75□□□□□ -1.17
POLR2B-210ENST00000495311 RPL36AP83881 106 aaKnown RBP7.75□□□□□ -1.17
POLR2B-210ENST00000495311 ESRGQ1W209 222 aa7.75□□□□□ -1.17
POLR2B-210ENST00000495311 COX19Q49B96 90 aa7.75□□□□□ -1.17
POLR2B-210ENST00000495311 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
POLR2B-210ENST00000495311 ATRAIDQ6UW56 229 aa7.75□□□□□ -1.17
POLR2B-210ENST00000495311 NEXN-AS1Q8NBZ9 246 aa7.75□□□□□ -1.17
POLR2B-210ENST00000495311 RPL36ALQ969Q0 106 aaKnown RBP7.75□□□□□ -1.17
POLR2B-210ENST00000495311 APOBP04114 4563 aaKnown RBP7.75□□□□□ -1.17
POLR2B-210ENST00000495311 TRBV24-1A0A075B6N3 115 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 PPP1R17O96001 155 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 MGPP08493 103 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 CAMPP49913 170 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 CCL18P55774 89 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 UBE2D3P61077 147 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 UBE2D2P62837 147 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 LYPD5Q6UWN5 251 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 AMN1Q8IY45 258 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 ATP6V0E2Q8NHE4 81 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 YPEL4Q96NS1 127 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 UPK3BQ9BT76 320 aa7.74□□□□□ -1.17
POLR2B-210ENST00000495311 PPBPP02775 128 aa7.73□□□□□ -1.17
POLR2B-210ENST00000495311 ELOBQ15370 118 aa7.73□□□□□ -1.17
POLR2B-210ENST00000495311 MRPL51Q4U2R6 128 aaKnown RBP7.73□□□□□ -1.17
POLR2B-210ENST00000495311 DAZ4Q86SG3 579 aaKnown RBP7.73□□□□□ -1.17
POLR2B-210ENST00000495311 ZNRF2Q8NHG8 242 aa7.73□□□□□ -1.17
POLR2B-210ENST00000495311 GNB1LQ9BYB4 327 aa7.73□□□□□ -1.17
POLR2B-210ENST00000495311 GTSF1LQ9H1H1 148 aa7.73□□□□□ -1.17
POLR2B-210ENST00000495311 DAZ3Q9NR90 486 aaKnown RBP7.73□□□□□ -1.17
POLR2B-210ENST00000495311 GAGE12JA6NER3 117 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 GAGE1Q13065 139 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 GAGE4Q13068 117 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 GAGE5Q13069 117 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 GAGE13Q4V321 117 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 TMEM136Q6ZRR5 245 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 SMCO4Q9NRQ5 59 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 MRPS16Q9Y3D3 137 aaKnown RBP7.72□□□□□ -1.17
POLR2B-210ENST00000495311 LINC00588Q9Y4M8 146 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 TNFRSF18Q9Y5U5 241 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 URGCP-MRPS24S4R325 110 aa7.72□□□□□ -1.17
POLR2B-210ENST00000495311 HERC1Q15751 4861 aa7.71□□□□□ -1.18
POLR2B-210ENST00000495311 TRAV26-2A0A0B4J265 109 aa7.71□□□□□ -1.18
POLR2B-210ENST00000495311 PRSS47A8MTI9 375 aa7.71□□□□□ -1.18
POLR2B-210ENST00000495311 PHOX2AO14813 284 aa7.71□□□□□ -1.18
POLR2B-210ENST00000495311 POLR2KP53803 58 aaKnown RBP7.71□□□□□ -1.18
POLR2B-210ENST00000495311 RPL32P62910 135 aaKnown RBP7.71□□□□□ -1.18
POLR2B-210ENST00000495311 TMEM97Q5BJF2 176 aa7.71□□□□□ -1.18
POLR2B-210ENST00000495311 LELP1Q5T871 98 aa7.71□□□□□ -1.18
POLR2B-210ENST00000495311 NRACQ8N912 160 aa7.71□□□□□ -1.18
POLR2B-210ENST00000495311 GAS8-AS1O95177 125 aa7.7□□□□□ -1.18
POLR2B-210ENST00000495311 HLA-DQA1P01909 254 aa7.7□□□□□ -1.18
POLR2B-210ENST00000495311 MT-ND6P03923 174 aa7.7□□□□□ -1.18
POLR2B-210ENST00000495311 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.7□□□□□ -1.18
POLR2B-210ENST00000495311 C20orf78Q9BR46 151 aa7.7□□□□□ -1.18
POLR2B-210ENST00000495311 LAMTOR2Q9Y2Q5 125 aa7.7□□□□□ -1.18
POLR2B-210ENST00000495311 DNAH5Q8TE73 4624 aa7.7□□□□□ -1.18
POLR2B-210ENST00000495311 TRBV27A0A0K0K1C4 114 aa7.69□□□□□ -1.18
POLR2B-210ENST00000495311 S100A1P23297 94 aa7.69□□□□□ -1.18
POLR2B-210ENST00000495311 CKS2P33552 79 aa7.69□□□□□ -1.18
POLR2B-210ENST00000495311 ORMDL3Q8N138 153 aa7.69□□□□□ -1.18
POLR2B-210ENST00000495311 RPL39LQ96EH5 51 aaKnown RBP7.69□□□□□ -1.18
POLR2B-210ENST00000495311 TRBV6-8A0A0A6YYG3 113 aa7.68□□□□□ -1.18
POLR2B-210ENST00000495311 TGIF2-C20orf24A0A0A6YYL0 155 aa7.68□□□□□ -1.18
POLR2B-210ENST00000495311 SDHAF1A6NFY7 115 aa7.68□□□□□ -1.18
POLR2B-210ENST00000495311 K7EP13 123 aa7.68□□□□□ -1.18
POLR2B-210ENST00000495311 NCR2O95944 276 aa7.68□□□□□ -1.18
POLR2B-210ENST00000495311 RPS10P46783 165 aaKnown RBP7.68□□□□□ -1.18
POLR2B-210ENST00000495311 OR10J3Q5JRS4 329 aa7.68□□□□□ -1.18
POLR2B-210ENST00000495311 TMEM70Q9BUB7 260 aa7.68□□□□□ -1.18
POLR2B-210ENST00000495311 ST20Q9HBF5 79 aa7.68□□□□□ -1.18
POLR2B-210ENST00000495311 D6R8Y8 96 aa7.67□□□□□ -1.18
POLR2B-210ENST00000495311 VCYO14598 125 aa7.67□□□□□ -1.18
POLR2B-210ENST00000495311 TNFRSF6BO95407 300 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms