RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 CEBPGP53567 150 aa15.15■□□□□ 0.02
SNIP1-203ENST00000493916 CDPF1Q6NVV7 123 aa15.15■□□□□ 0.02
SNIP1-203ENST00000493916 FAM231DQ6ZW35 169 aa15.15■□□□□ 0.02
SNIP1-203ENST00000493916 CHCHD7Q9BUK0 85 aa15.15■□□□□ 0.02
SNIP1-203ENST00000493916 PSCAO43653 123 aa15.14■□□□□ 0.01
SNIP1-203ENST00000493916 MGPP08493 103 aa15.14■□□□□ 0.01
SNIP1-203ENST00000493916 NTF3P20783 257 aa15.14■□□□□ 0.01
SNIP1-203ENST00000493916 DAZ4Q86SG3 579 aaKnown RBP15.14■□□□□ 0.01
SNIP1-203ENST00000493916 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.14■□□□□ 0.01
SNIP1-203ENST00000493916 DAZ3Q9NR90 486 aaKnown RBP15.14■□□□□ 0.01
SNIP1-203ENST00000493916 URGCP-MRPS24S4R325 110 aa15.14■□□□□ 0.01
SNIP1-203ENST00000493916 TRBV6-8A0A0A6YYG3 113 aa15.13■□□□□ 0.01
SNIP1-203ENST00000493916 H7C1H1 209 aa15.13■□□□□ 0.01
SNIP1-203ENST00000493916 M0QY20 66 aa15.13■□□□□ 0.01
SNIP1-203ENST00000493916 SMIM7Q9BQ49 75 aa15.13■□□□□ 0.01
SNIP1-203ENST00000493916 TRAV8-3A0A0A6YYJ7 113 aa15.12■□□□□ 0.01
SNIP1-203ENST00000493916 SRP19P09132 144 aaKnown RBP15.12■□□□□ 0.01
SNIP1-203ENST00000493916 SUMO4Q6EEV6 95 aa15.12■□□□□ 0.01
SNIP1-203ENST00000493916 TEX261Q6UWH6 196 aa15.12■□□□□ 0.01
SNIP1-203ENST00000493916 DPH3P1Q9H4G8 78 aa15.12■□□□□ 0.01
SNIP1-203ENST00000493916 HSPG2P98160 4391 aa15.12■□□□□ 0.01
SNIP1-203ENST00000493916 LRCOL1A6NCL2 159 aa15.11■□□□□ 0.01
SNIP1-203ENST00000493916 GATCO43716 136 aaKnown RBP15.11■□□□□ 0.01
SNIP1-203ENST00000493916 TMEM97Q5BJF2 176 aa15.11■□□□□ 0.01
SNIP1-203ENST00000493916 CT83Q5H943 113 aa15.11■□□□□ 0.01
SNIP1-203ENST00000493916 LINC01551Q86U37 167 aa15.11■□□□□ 0.01
SNIP1-203ENST00000493916 GTSF1Q8WW33 167 aa15.11■□□□□ 0.01
SNIP1-203ENST00000493916 DNAJC30Q96LL9 226 aa15.11■□□□□ 0.01
SNIP1-203ENST00000493916 TM2D2Q9BX73 214 aa15.11■□□□□ 0.01
SNIP1-203ENST00000493916 APOBP04114 4563 aaKnown RBP15.11■□□□□ 0.01
SNIP1-203ENST00000493916 A0A087WX48 190 aa15.1■□□□□ 0.01
SNIP1-203ENST00000493916 ZNF727A8MUV8 499 aa15.09■□□□□ 0.01
SNIP1-203ENST00000493916 A8MWL6 223 aa15.09■□□□□ 0.01
SNIP1-203ENST00000493916 TWIST1Q15672 202 aa15.09■□□□□ 0.01
SNIP1-203ENST00000493916 KCNIP4Q6PIL6 250 aa15.09■□□□□ 0.01
SNIP1-203ENST00000493916 ELOBQ15370 118 aa15.08■□□□□ 0
SNIP1-203ENST00000493916 PKIAP61925 76 aa15.07■□□□□ 0
SNIP1-203ENST00000493916 RASL11AQ6T310 242 aa15.07■□□□□ 0
SNIP1-203ENST00000493916 FUSP35637 526 aaKnown RBP eCLIP15.06■□□□□ 0
SNIP1-203ENST00000493916 FOXA3P55318 350 aaPredicted RBP15.06■□□□□ 0
SNIP1-203ENST00000493916 NTM-AS1Q6ZSK4 140 aa15.06■□□□□ 0
SNIP1-203ENST00000493916 KLK12Q9UKR0 248 aa15.06■□□□□ 0
SNIP1-203ENST00000493916 COX11Q9Y6N1 276 aa15.06■□□□□ 0
SNIP1-203ENST00000493916 FAM74A3Q4VXF1 159 aa15.05■□□□□ -0
SNIP1-203ENST00000493916 RMI2Q96E14 147 aa15.05■□□□□ -0
SNIP1-203ENST00000493916 PCLOQ9Y6V0 5065 aa15.04■□□□□ -0
SNIP1-203ENST00000493916 TMEM262E9PQX1 116 aa15.04■□□□□ -0
SNIP1-203ENST00000493916 Q8N814 137 aa15.04■□□□□ -0
SNIP1-203ENST00000493916 NTN5Q8WTR8 489 aaPredicted RBP15.04■□□□□ -0
SNIP1-203ENST00000493916 CHCHD5Q9BSY4 110 aa15.04■□□□□ -0
SNIP1-203ENST00000493916 NIT2Q9NQR4 276 aa15.04■□□□□ -0
SNIP1-203ENST00000493916 OSTCQ9NRP0 149 aa15.04■□□□□ -0
SNIP1-203ENST00000493916 TRBV25-1A0A075B6N4 114 aa15.03■□□□□ -0
SNIP1-203ENST00000493916 IQCJQ1A5X6 159 aa15.03■□□□□ -0
SNIP1-203ENST00000493916 MPV17L2Q567V2 206 aa15.03■□□□□ -0
SNIP1-203ENST00000493916 TSKUQ8WUA8 353 aa15.03■□□□□ -0
SNIP1-203ENST00000493916 FRZBQ92765 325 aa15.03■□□□□ -0
SNIP1-203ENST00000493916 PGLYRP4Q96LB8 373 aa15.03■□□□□ -0
SNIP1-203ENST00000493916 GFRA4Q9GZZ7 299 aa15.03■□□□□ -0
SNIP1-203ENST00000493916 C9JQL5 133 aa15.02■□□□□ -0
SNIP1-203ENST00000493916 PEA15Q15121 130 aa15.02■□□□□ -0
SNIP1-203ENST00000493916 ATRAIDQ6UW56 229 aa15.02■□□□□ -0
SNIP1-203ENST00000493916 SMIM15Q7Z3B0 74 aa15.02■□□□□ -0
SNIP1-203ENST00000493916 SMDT1Q9H4I9 107 aa15.02■□□□□ -0
SNIP1-203ENST00000493916 IGHV1-24A0A0C4DH33 117 aa15.01□□□□□ -0.01
SNIP1-203ENST00000493916 FAM231BA6NCW3 169 aa15.01□□□□□ -0.01
SNIP1-203ENST00000493916 Q0VG73 95 aa15.01□□□□□ -0.01
SNIP1-203ENST00000493916 TMEM241Q24JQ0 296 aa15.01□□□□□ -0.01
SNIP1-203ENST00000493916 UBE2WQ96B02 151 aa15.01□□□□□ -0.01
SNIP1-203ENST00000493916 C15orf54Q8N8G6 183 aa15□□□□□ -0.01
SNIP1-203ENST00000493916 GATD1Q8NB37 220 aa15□□□□□ -0.01
SNIP1-203ENST00000493916 ISOC2Q96AB3 205 aa15□□□□□ -0.01
SNIP1-203ENST00000493916 BORCS7Q96B45 105 aa15□□□□□ -0.01
SNIP1-203ENST00000493916 HIGD1CA8MV81 97 aa14.99□□□□□ -0.01
SNIP1-203ENST00000493916 SRSF3P84103 164 aaKnown RBP14.99□□□□□ -0.01
SNIP1-203ENST00000493916 MAPKAPK5-AS1Q8N8E1 139 aa14.99□□□□□ -0.01
SNIP1-203ENST00000493916 IGKV2D-24A0A075B6R9 120 aa14.98□□□□□ -0.01
SNIP1-203ENST00000493916 IGLV5-52A0A0A0MRZ9 124 aa14.98□□□□□ -0.01
SNIP1-203ENST00000493916 TRAV26-2A0A0B4J265 109 aa14.98□□□□□ -0.01
SNIP1-203ENST00000493916 GCSHP23434 173 aa14.98□□□□□ -0.01
SNIP1-203ENST00000493916 KRTAP10-1P60331 282 aa14.98□□□□□ -0.01
SNIP1-203ENST00000493916 RPL23P62829 140 aaKnown RBP14.98□□□□□ -0.01
SNIP1-203ENST00000493916 WFDC2Q14508 124 aa14.98□□□□□ -0.01
SNIP1-203ENST00000493916 NAT8Q9UHE5 227 aa14.98□□□□□ -0.01
SNIP1-203ENST00000493916 V9GYV3 84 aa14.98□□□□□ -0.01
SNIP1-203ENST00000493916 A0A1B0GUT8 65 aa14.97□□□□□ -0.01
SNIP1-203ENST00000493916 CRPP02741 224 aa14.97□□□□□ -0.01
SNIP1-203ENST00000493916 ANGP03950 147 aaKnown RBP14.97□□□□□ -0.01
SNIP1-203ENST00000493916 ENHOQ6UWT2 76 aa14.97□□□□□ -0.01
SNIP1-203ENST00000493916 Q8N976 141 aa14.97□□□□□ -0.01
SNIP1-203ENST00000493916 RBX1P62877 108 aa14.96□□□□□ -0.01
SNIP1-203ENST00000493916 GAGE6Q13070 117 aa14.96□□□□□ -0.01
SNIP1-203ENST00000493916 ADIRFQ15847 76 aa14.95□□□□□ -0.02
SNIP1-203ENST00000493916 TMEM243Q9BU79 118 aa14.95□□□□□ -0.02
SNIP1-203ENST00000493916 COTL1Q14019 142 aa14.94□□□□□ -0.02
SNIP1-203ENST00000493916 BAALCQ8WXS3 180 aa14.94□□□□□ -0.02
SNIP1-203ENST00000493916 C1orf43Q9BWL3 253 aa14.94□□□□□ -0.02
SNIP1-203ENST00000493916 KRTAP17-1Q9BYP8 105 aa14.94□□□□□ -0.02
SNIP1-203ENST00000493916 PRR34Q9NV39 138 aa14.94□□□□□ -0.02
SNIP1-203ENST00000493916 LECT2O14960 151 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms