RNA–Protein interactions for RNA: ENST00000493792.1

TRAPPC12-222, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-222ENST00000493792 TNP2Q05952 138 aa7.08□□□□□ -1.28
TRAPPC12-222ENST00000493792 FAM74A3Q4VXF1 159 aa7.08□□□□□ -1.28
TRAPPC12-222ENST00000493792 FAM231DQ6ZW35 169 aa7.08□□□□□ -1.28
TRAPPC12-222ENST00000493792 SMIM15Q7Z3B0 74 aa7.08□□□□□ -1.28
TRAPPC12-222ENST00000493792 BORCS7Q96B45 105 aa7.08□□□□□ -1.28
TRAPPC12-222ENST00000493792 A0A087WWC5 75 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 DNAH10OSP0CZ25 163 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 LINC00694P0DN24 101 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 CTRLP40313 264 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 Q8N1X5 172 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 C10orf126Q8N4M7 172 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 NEXN-AS1Q8NBZ9 246 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 DPH3P1Q9H4G8 78 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 NAT8Q9UHE5 227 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 TNFRSF18Q9Y5U5 241 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 KIF25-AS1Q9Y6Z4 181 aa7.07□□□□□ -1.28
TRAPPC12-222ENST00000493792 H7C1H1 209 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 UBE2D3P61077 147 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 RPL23P62829 140 aaKnown RBP7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 UBE2D2P62837 147 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 SUMO4Q6EEV6 95 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 WDR73Q6P4I2 378 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 GTSF1Q8WW33 167 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 SMDT1Q9H4I9 107 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 Q9HAA7 133 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 OSTCQ9NRP0 149 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 URGCP-MRPS24S4R325 110 aa7.06□□□□□ -1.28
TRAPPC12-222ENST00000493792 FAT1Q14517 4588 aa7.05□□□□□ -1.28
TRAPPC12-222ENST00000493792 CT83Q5H943 113 aa7.05□□□□□ -1.28
TRAPPC12-222ENST00000493792 LINC01556Q5JQF7 62 aa7.05□□□□□ -1.28
TRAPPC12-222ENST00000493792 KCNIP4Q6PIL6 250 aa7.05□□□□□ -1.28
TRAPPC12-222ENST00000493792 NFE4Q86UQ8 179 aa7.05□□□□□ -1.28
TRAPPC12-222ENST00000493792 OR10G8Q8NGN5 311 aa7.05□□□□□ -1.28
TRAPPC12-222ENST00000493792 TSKUQ8WUA8 353 aa7.05□□□□□ -1.28
TRAPPC12-222ENST00000493792 ISOC2Q96AB3 205 aa7.05□□□□□ -1.28
TRAPPC12-222ENST00000493792 HIGD1CA8MV81 97 aa7.04□□□□□ -1.28
TRAPPC12-222ENST00000493792 K7EP13 123 aa7.04□□□□□ -1.28
TRAPPC12-222ENST00000493792 BTF3P20290 206 aaKnown RBP7.04□□□□□ -1.28
TRAPPC12-222ENST00000493792 RASL11AQ6T310 242 aa7.04□□□□□ -1.28
TRAPPC12-222ENST00000493792 A0A087WX48 190 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 A0A1B0GUT8 65 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 TMEM262E9PQX1 116 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 M0QY20 66 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 PSCAO43653 123 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 Q8N3U1 123 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 DNAJC30Q96LL9 226 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 CHCHD5Q9BSY4 110 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 CNFNQ9BYD5 112 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 GFRA4Q9GZZ7 299 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 V9GYV3 84 aa7.03□□□□□ -1.28
TRAPPC12-222ENST00000493792 TRBV6-8A0A0A6YYG3 113 aa7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 TRAV26-2A0A0B4J265 109 aa7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 IBA57-AS1B1ANH7 110 aa7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 EREGO14944 169 aa7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 FOXA3P55318 350 aaPredicted RBP7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 RIGQ13278 110 aa7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 CLLU1Q5K131 121 aa7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 DAZ4Q86SG3 579 aaKnown RBP7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 NIT1Q86X76 327 aa7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 NIT2Q9NQR4 276 aa7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 DAZ3Q9NR90 486 aaKnown RBP7.02□□□□□ -1.29
TRAPPC12-222ENST00000493792 FAM231BA6NCW3 169 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 C16orf90A8MZG2 172 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 IFITM2Q01629 132 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 TMEM97Q5BJF2 176 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 Q6ZRN7 208 aaPredicted RBP7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 SPATA12Q7Z6I5 190 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 GATD1Q8NB37 220 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 DEFB104AQ8WTQ1 72 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 NAT8BQ9UHF3 227 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 KLK12Q9UKR0 248 aa7.01□□□□□ -1.29
TRAPPC12-222ENST00000493792 TRBV25-1A0A075B6N4 114 aa7□□□□□ -1.29
TRAPPC12-222ENST00000493792 NUP35Q8NFH5 326 aa7□□□□□ -1.29
TRAPPC12-222ENST00000493792 UBR4Q5T4S7 5183 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 TRAV8-3A0A0A6YYJ7 113 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 IGHV1-24A0A0C4DH33 117 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 GAGE6Q13070 117 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 COTL1Q14019 142 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 LAGE3Q14657 143 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 ELOBQ15370 118 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 NTM-AS1Q6ZSK4 140 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 UBE2WQ96B02 151 aa6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 RPL39LQ96EH5 51 aaKnown RBP6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 DMBT1Q9UGM3 2413 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC12-222ENST00000493792 PPP1R2P9O14990 202 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 ANGP03950 147 aaKnown RBP6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 AMTP48728 403 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 CAMPP49913 170 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 PKIAP61925 76 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 MPV17L2Q567V2 206 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 AMN1Q8IY45 258 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 TM2D2Q9BX73 214 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 TMEM191AQ9H0A3 160 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 MYCBP2O75592 4640 aa6.98□□□□□ -1.29
TRAPPC12-222ENST00000493792 IGKV2D-24A0A075B6R9 120 aa6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 SMIM27A0A1W2PRY6 76 aa6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 UBE2L6O14933 153 aa6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 CRPP02741 224 aa6.97□□□□□ -1.29
TRAPPC12-222ENST00000493792 PNRC1Q12796 327 aaPredicted RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms