RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 NUP210Q8TEM1 1887 aaPredicted RBP15.37■□□□□ 0.05
RNF40-203ENST00000493683 CLEC2BQ92478 149 aa15.37■□□□□ 0.05
RNF40-203ENST00000493683 TNRC6AQ8NDV7 1962 aaKnown RBP15.37■□□□□ 0.05
RNF40-203ENST00000493683 ANAPC1Q9H1A4 1944 aa15.37■□□□□ 0.05
RNF40-203ENST00000493683 FANCD2OSQ96PS1 177 aa15.36■□□□□ 0.05
RNF40-203ENST00000493683 PRO0255Q9UI72 69 aa15.36■□□□□ 0.05
RNF40-203ENST00000493683 PROP1O75360 226 aa15.35■□□□□ 0.05
RNF40-203ENST00000493683 TRBV12-3P01733 135 aa15.35■□□□□ 0.05
RNF40-203ENST00000493683 ADORA2A-AS1P86434 159 aa15.35■□□□□ 0.05
RNF40-203ENST00000493683 ZGRF1Q86YA3 2104 aa15.35■□□□□ 0.05
RNF40-203ENST00000493683 COX7BP24311 80 aa15.34■□□□□ 0.05
RNF40-203ENST00000493683 IGKV1D-37A0A075B6S9 117 aa15.34■□□□□ 0.05
RNF40-203ENST00000493683 A6NDX4 124 aa15.34■□□□□ 0.05
RNF40-203ENST00000493683 E7EUB6 86 aa15.34■□□□□ 0.05
RNF40-203ENST00000493683 HIST2H2BDQ6DRA6 164 aa15.33■□□□□ 0.05
RNF40-203ENST00000493683 FRMPD3Q5JV73 1810 aa15.33■□□□□ 0.04
RNF40-203ENST00000493683 F8W735 103 aaPredicted RBP15.33■□□□□ 0.04
RNF40-203ENST00000493683 ZFP36P26651 326 aaKnown RBP15.33■□□□□ 0.04
RNF40-203ENST00000493683 NFE4Q86UQ8 179 aa15.33■□□□□ 0.04
RNF40-203ENST00000493683 PTPRQQ9UMZ3 2332 aa15.33■□□□□ 0.04
RNF40-203ENST00000493683 H7C423 109 aa15.33■□□□□ 0.04
RNF40-203ENST00000493683 PLXND1Q9Y4D7 1925 aa15.32■□□□□ 0.04
RNF40-203ENST00000493683 SEM1Q6ZVN7 128 aa15.32■□□□□ 0.04
RNF40-203ENST00000493683 IGLC6P0CF74 106 aa15.31■□□□□ 0.04
RNF40-203ENST00000493683 UFSP1Q6NVU6 142 aa15.31■□□□□ 0.04
RNF40-203ENST00000493683 NCKAP5O14513 1909 aa15.31■□□□□ 0.04
RNF40-203ENST00000493683 SPRY4Q9C004 299 aa15.31■□□□□ 0.04
RNF40-203ENST00000493683 PCNX2A6NKB5 2137 aa15.31■□□□□ 0.04
RNF40-203ENST00000493683 ATP5EP2Q5VTU8 51 aa15.3■□□□□ 0.04
RNF40-203ENST00000493683 IGLV2-8P01709 118 aa15.3■□□□□ 0.04
RNF40-203ENST00000493683 A0A0J9YXY3 114 aa15.3■□□□□ 0.04
RNF40-203ENST00000493683 C14orf132Q9NPU4 83 aa15.3■□□□□ 0.04
RNF40-203ENST00000493683 CLPSL1A2RUU4 121 aa15.29■□□□□ 0.04
RNF40-203ENST00000493683 MED13Q9UHV7 2174 aa15.29■□□□□ 0.04
RNF40-203ENST00000493683 FSTL3O95633 263 aa15.29■□□□□ 0.04
RNF40-203ENST00000493683 TCL1BO95988 128 aa15.29■□□□□ 0.04
RNF40-203ENST00000493683 ODF3BA8MYP8 253 aa15.29■□□□□ 0.04
RNF40-203ENST00000493683 KLK12Q9UKR0 248 aa15.29■□□□□ 0.04
RNF40-203ENST00000493683 FRMD6-AS1P0C7T7 363 aa15.28■□□□□ 0.04
RNF40-203ENST00000493683 UNQ9165/PRO28630Q6UXU0 137 aa15.28■□□□□ 0.04
RNF40-203ENST00000493683 MLST8Q9BVC4 326 aa15.28■□□□□ 0.04
RNF40-203ENST00000493683 MAP6D1Q9H9H5 199 aa15.28■□□□□ 0.04
RNF40-203ENST00000493683 Q6ZUT4 128 aa15.28■□□□□ 0.04
RNF40-203ENST00000493683 C14orf177Q52M58 125 aa15.28■□□□□ 0.04
RNF40-203ENST00000493683 TNFRSF13BO14836 293 aaPredicted RBP15.27■□□□□ 0.04
RNF40-203ENST00000493683 SPANXB1Q9NS25 103 aaPredicted RBP15.27■□□□□ 0.04
RNF40-203ENST00000493683 C4orf48Q5BLP8 95 aa15.27■□□□□ 0.03
RNF40-203ENST00000493683 KLK5Q9Y337 293 aaPredicted RBP15.26■□□□□ 0.03
RNF40-203ENST00000493683 ZFAND2AQ8N6M9 145 aa15.26■□□□□ 0.03
RNF40-203ENST00000493683 NEXN-AS1Q8NBZ9 246 aa15.26■□□□□ 0.03
RNF40-203ENST00000493683 CCDC140Q96MF4 163 aa15.26■□□□□ 0.03
RNF40-203ENST00000493683 B9D2Q9BPU9 175 aa15.26■□□□□ 0.03
RNF40-203ENST00000493683 DEFB135Q30KP9 77 aa15.25■□□□□ 0.03
RNF40-203ENST00000493683 ACACBO00763 2458 aa15.25■□□□□ 0.03
RNF40-203ENST00000493683 SMIM9A6NGZ8 99 aa15.24■□□□□ 0.03
RNF40-203ENST00000493683 NACAE9PAV3 2078 aa15.24■□□□□ 0.03
RNF40-203ENST00000493683 SMAD5-AS1Q9Y6J3 95 aa15.24■□□□□ 0.03
RNF40-203ENST00000493683 ZNF80P51504 273 aaPredicted RBP15.24■□□□□ 0.03
RNF40-203ENST00000493683 MBD6Q96DN6 1003 aa15.24■□□□□ 0.03
RNF40-203ENST00000493683 BPY2O14599 106 aa15.23■□□□□ 0.03
RNF40-203ENST00000493683 IGF1P05019 195 aa15.23■□□□□ 0.03
RNF40-203ENST00000493683 UPK3BQ9BT76 320 aa15.23■□□□□ 0.03
RNF40-203ENST00000493683 ESM1Q9NQ30 184 aa15.23■□□□□ 0.03
RNF40-203ENST00000493683 LOXL1Q08397 574 aaPredicted RBP15.23■□□□□ 0.03
RNF40-203ENST00000493683 UQCRQO14949 82 aa15.23■□□□□ 0.03
RNF40-203ENST00000493683 SEC61GP60059 68 aa15.22■□□□□ 0.03
RNF40-203ENST00000493683 CHD3Q12873 2000 aaKnown RBP15.22■□□□□ 0.03
RNF40-203ENST00000493683 IL17DQ8TAD2 202 aa15.22■□□□□ 0.03
RNF40-203ENST00000493683 PTH2Q96A98 100 aa15.22■□□□□ 0.03
RNF40-203ENST00000493683 PLCE1Q9P212 2302 aa15.22■□□□□ 0.03
RNF40-203ENST00000493683 PRB1P04280 392 aa15.22■□□□□ 0.03
RNF40-203ENST00000493683 LYRM9A8MSI8 78 aa15.21■□□□□ 0.03
RNF40-203ENST00000493683 MUC6Q6W4X9 2439 aa15.21■□□□□ 0.02
RNF40-203ENST00000493683 MSMPQ1L6U9 139 aa15.21■□□□□ 0.02
RNF40-203ENST00000493683 P0DMU3 169 aa15.2■□□□□ 0.02
RNF40-203ENST00000493683 FAM231AP0DMU4 169 aa15.2■□□□□ 0.02
RNF40-203ENST00000493683 FAM231CP0DMU5 169 aa15.2■□□□□ 0.02
RNF40-203ENST00000493683 NDUFV3P56181 108 aaKnown RBP15.2■□□□□ 0.02
RNF40-203ENST00000493683 LINC00322Q6ZN03 302 aaPredicted RBP15.2■□□□□ 0.02
RNF40-203ENST00000493683 IBA57-AS1B1ANH7 110 aa15.2■□□□□ 0.02
RNF40-203ENST00000493683 TMEM223A0PJW6 202 aa15.2■□□□□ 0.02
RNF40-203ENST00000493683 DEFB1P60022 68 aa15.19■□□□□ 0.02
RNF40-203ENST00000493683 TRAV26-1A0A087WT03 109 aa15.19■□□□□ 0.02
RNF40-203ENST00000493683 GDF5OSQ5U4N7 250 aa15.19■□□□□ 0.02
RNF40-203ENST00000493683 ZFHX2Q9C0A1 2572 aaPredicted RBP15.19■□□□□ 0.02
RNF40-203ENST00000493683 K7EQG2 157 aa15.18■□□□□ 0.02
RNF40-203ENST00000493683 FAM110AQ9BQ89 295 aa15.18■□□□□ 0.02
RNF40-203ENST00000493683 H0Y9J4 135 aa15.18■□□□□ 0.02
RNF40-203ENST00000493683 U3KQK5 164 aa15.18■□□□□ 0.02
RNF40-203ENST00000493683 IGKV2D-26A0A0A0MRZ7 120 aa15.18■□□□□ 0.02
RNF40-203ENST00000493683 REG3AQ06141 175 aa15.17■□□□□ 0.02
RNF40-203ENST00000493683 LRRC75A-AS1Q8N1F1 130 aa15.17■□□□□ 0.02
RNF40-203ENST00000493683 BRWD1-AS2P59051 145 aa15.17■□□□□ 0.02
RNF40-203ENST00000493683 EIF4EBP1Q13541 118 aaPredicted RBP15.17■□□□□ 0.02
RNF40-203ENST00000493683 TRBV30A0A0K0K1B3 111 aa15.17■□□□□ 0.02
RNF40-203ENST00000493683 CEMP1Q6PRD7 247 aaPredicted RBP15.16■□□□□ 0.02
RNF40-203ENST00000493683 NOTCH2Q04721 2471 aa15.16■□□□□ 0.02
RNF40-203ENST00000493683 ZNF22P17026 224 aaPredicted RBP15.16■□□□□ 0.02
RNF40-203ENST00000493683 DYSFO75923 2080 aa15.16■□□□□ 0.02
RNF40-203ENST00000493683 BDP1A6H8Y1 2624 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms