RNA–Protein interactions for RNA: ENST00000490399.5

PRPF4B-207, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 576 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-207ENST00000490399 ITPR3Q14573 2671 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 SMG6Q86US8 1419 aaKnown RBP0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 BCORL1Q5H9F3 1711 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 USP54Q70EL1 1684 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 TRBV7-1A0A0A6YYK4 115 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 TRAV12-3A0A0B4J271 114 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 LOC101927531A0A1B0GV80 90 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 LOC285095A0A1B0GVY8 99 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 TMEM14DPA8MWL7 114 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 F6UZH7 168 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 SPINK1P00995 79 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 IFNGP01579 166 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 MT-ND4LP03901 98 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 TSPAN19P0C672 248 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 NBEAP1P0C6P0 100 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 PIRTP0C851 137 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 MPC1LP0DKB6 136 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 IFITM1P13164 125 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 CBLN1P23435 193 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 TPPP2P59282 170 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 ELOF1P60002 83 aaKnown RBP0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 MRPS10P82664 201 aaKnown RBP0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 WHAMMP3Q1A5X7 153 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 TMEM244Q5VVB8 128 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 CSAG1Q6PB30 78 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 ZNF818PQ6ZRF7 136 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 Q6ZUT4 128 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 VMO1Q7Z5L0 202 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 DEFB132Q7Z7B7 95 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 BAGE3Q86Y29 109 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 UBE2DNLQ8IWF7 75 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 C5orf56Q8N8D9 126 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 MYOZ3Q8TDC0 251 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 COX7B2Q8TF08 81 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 PPP3R2Q96LZ3 170 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 NAA60Q9H7X0 242 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 NPVFQ9HCQ7 196 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 FAIMQ9NVQ4 179 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 UQCR10Q9UDW1 63 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 SPCS1Q9Y6A9 102 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 R4GMQ9 66 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 CCDC141Q6ZP82 1450 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 CHD6Q8TD26 2715 aa0.22□□□□□ -2.37
PRPF4B-207ENST00000490399 PRG4Q92954 1404 aaPredicted RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 USP9YO00507 2555 aaPredicted RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 TRAV13-2A0A0B4J235 113 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 TRAV1-2A0A0B4J238 106 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 EFCAB10A6NFE3 127 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 MIF4GDA9UHW6 222 aaKnown RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 LY6G6CO95867 125 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 CFDP00746 253 aaPredicted RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 APOC2P02655 101 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 HMGN1P05114 100 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 SPINK8P0C7L1 97 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 SLC25A6P12236 298 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 HIST1H1DP16402 221 aaKnown RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 CCL3L1P16619 93 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 FGF7P21781 194 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 NPC2P61916 151 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 UBE2G1P62253 170 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 RPS25P62851 125 aaKnown RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 SELENOWP63302 87 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 CCL8P80075 99 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 DCDP81605 110 aaKnown RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 EMX2Q04743 252 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 MIC13Q5XKP0 118 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 C8orf59Q8N0T1 100 aaPredicted RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 C20orf197Q8N268 126 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 FAM103A1Q9BTL3 118 aaKnown RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 SNRNP25Q9BV90 132 aaKnown RBP0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 FAM107BQ9H098 131 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 TAF9BQ9HBM6 251 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 PROK2Q9HC23 129 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 NDUFA12Q9UI09 145 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 LENEPQ9Y5L5 61 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 DNAJC15Q9Y5T4 150 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 V9GYH0 126 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 FAM135AQ9P2D6 1515 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 CFTRP13569 1480 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 IFT140Q96RY7 1462 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 SOGA1O94964 1423 aa0.21□□□□□ -2.38
PRPF4B-207ENST00000490399 GCN1Q92616 2671 aaKnown RBP0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 WDR97A6NE52 1622 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 ZFHX4Q86UP3 3567 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 POLQO75417 2590 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 SRCAPQ6ZRS2 3230 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 LOC285556D6RIA3 1793 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 TRAV22A0A0B4J277 110 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 NBDYA0A0U1RRE5 68 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 CTXND1A0A1B0GTU2 59 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 FAM24AA6NFZ4 105 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 ARPC5O15511 151 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 SSSCA1O60232 199 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 PPP1R17O96001 155 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 NMBP08949 121 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 IGLC6P0CF74 106 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 KRTDAPP60985 99 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 INSL4Q14641 139 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 PIGYQ3MUY2 71 aa0.2□□□□□ -2.38
PRPF4B-207ENST00000490399 Q56UQ5 140 aa0.2□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms