RNA–Protein interactions for RNA: ENST00000490005.1

SOX2-OT-211, SOX2 overlapping transcript, humanhuman

TSL 2

Gene SOX2-OT, Length 387 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-211ENST00000490005 BAALCQ8WXS3 180 aa9.1□□□□□ -0.95
SOX2-OT-211ENST00000490005 PDE6DO43924 150 aa9.09□□□□□ -0.95
SOX2-OT-211ENST00000490005 SMR3BP02814 79 aaPredicted RBP9.09□□□□□ -0.95
SOX2-OT-211ENST00000490005 MGPP08493 103 aa9.09□□□□□ -0.95
SOX2-OT-211ENST00000490005 VAX2Q9UIW0 290 aa9.09□□□□□ -0.95
SOX2-OT-211ENST00000490005 FAT1Q14517 4588 aa9.09□□□□□ -0.96
SOX2-OT-211ENST00000490005 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 TRBV6-8A0A0A6YYG3 113 aa9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 IFNA1P01562 189 aa9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 P01737 135 aa9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 MPV17L2Q567V2 206 aa9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 LYZL1Q6UWQ5 148 aa9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 UBE2WQ96B02 151 aa9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 AP1S3Q96PC3 154 aa9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 RNASE7Q9H1E1 156 aaKnown RBP9.08□□□□□ -0.96
SOX2-OT-211ENST00000490005 TEX46H3BTG2 121 aa9.07□□□□□ -0.96
SOX2-OT-211ENST00000490005 SUMO4Q6EEV6 95 aa9.07□□□□□ -0.96
SOX2-OT-211ENST00000490005 Q8N976 141 aa9.07□□□□□ -0.96
SOX2-OT-211ENST00000490005 NUDT10Q8NFP7 164 aa9.07□□□□□ -0.96
SOX2-OT-211ENST00000490005 DAZAP1Q96EP5 407 aaKnown RBP9.07□□□□□ -0.96
SOX2-OT-211ENST00000490005 NUDT11Q96G61 164 aa9.07□□□□□ -0.96
SOX2-OT-211ENST00000490005 URGCP-MRPS24S4R325 110 aa9.07□□□□□ -0.96
SOX2-OT-211ENST00000490005 IGKV2D-24A0A075B6R9 120 aa9.06□□□□□ -0.96
SOX2-OT-211ENST00000490005 A0A087WX48 190 aa9.06□□□□□ -0.96
SOX2-OT-211ENST00000490005 TRAV8-3A0A0A6YYJ7 113 aa9.06□□□□□ -0.96
SOX2-OT-211ENST00000490005 M0QY20 66 aa9.06□□□□□ -0.96
SOX2-OT-211ENST00000490005 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
SOX2-OT-211ENST00000490005 C15orf54Q8N8G6 183 aa9.06□□□□□ -0.96
SOX2-OT-211ENST00000490005 OCC1Q8TAD7 63 aa9.06□□□□□ -0.96
SOX2-OT-211ENST00000490005 TM2D2Q9BX73 214 aa9.06□□□□□ -0.96
SOX2-OT-211ENST00000490005 TMEM262E9PQX1 116 aa9.05□□□□□ -0.96
SOX2-OT-211ENST00000490005 SMIM17P0DL12 118 aa9.05□□□□□ -0.96
SOX2-OT-211ENST00000490005 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
SOX2-OT-211ENST00000490005 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
SOX2-OT-211ENST00000490005 NTN5Q8WTR8 489 aaPredicted RBP9.05□□□□□ -0.96
SOX2-OT-211ENST00000490005 CHCHD5Q9BSY4 110 aa9.05□□□□□ -0.96
SOX2-OT-211ENST00000490005 EPM2AB3EWF7 344 aa9.04□□□□□ -0.96
SOX2-OT-211ENST00000490005 CTRLP40313 264 aa9.04□□□□□ -0.96
SOX2-OT-211ENST00000490005 FOXA3P55318 350 aaPredicted RBP9.04□□□□□ -0.96
SOX2-OT-211ENST00000490005 GAGE6Q13070 117 aa9.04□□□□□ -0.96
SOX2-OT-211ENST00000490005 Q5VSD8 79 aa9.04□□□□□ -0.96
SOX2-OT-211ENST00000490005 GTSF1Q8WW33 167 aa9.04□□□□□ -0.96
SOX2-OT-211ENST00000490005 SMIM12Q96EX1 92 aa9.04□□□□□ -0.96
SOX2-OT-211ENST00000490005 SRRM2Q9UQ35 2752 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-211ENST00000490005 TRAV26-2A0A0B4J265 109 aa9.03□□□□□ -0.96
SOX2-OT-211ENST00000490005 NTF3P20783 257 aa9.03□□□□□ -0.96
SOX2-OT-211ENST00000490005 CEBPGP53567 150 aa9.03□□□□□ -0.96
SOX2-OT-211ENST00000490005 TOR2AQ5JU69 321 aa9.03□□□□□ -0.96
SOX2-OT-211ENST00000490005 ATRAIDQ6UW56 229 aa9.03□□□□□ -0.96
SOX2-OT-211ENST00000490005 RPP21Q9H633 154 aaKnown RBP9.03□□□□□ -0.96
SOX2-OT-211ENST00000490005 ANGP03950 147 aaKnown RBP9.02□□□□□ -0.97
SOX2-OT-211ENST00000490005 RBX1P62877 108 aa9.02□□□□□ -0.97
SOX2-OT-211ENST00000490005 CACNG7P62955 275 aa9.02□□□□□ -0.97
SOX2-OT-211ENST00000490005 LYPD6BQ8NI32 183 aa9.02□□□□□ -0.97
SOX2-OT-211ENST00000490005 CHCHD7Q9BUK0 85 aa9.02□□□□□ -0.97
SOX2-OT-211ENST00000490005 BLOC1S1P78537 153 aa9.01□□□□□ -0.97
SOX2-OT-211ENST00000490005 GFRA4Q9GZZ7 299 aa9.01□□□□□ -0.97
SOX2-OT-211ENST00000490005 XKRY2A2RUG3 117 aa9□□□□□ -0.97
SOX2-OT-211ENST00000490005 TMEM70Q9BUB7 260 aa9□□□□□ -0.97
SOX2-OT-211ENST00000490005 DPH3P1Q9H4G8 78 aa9□□□□□ -0.97
SOX2-OT-211ENST00000490005 VPS13BQ7Z7G8 4022 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 F2Z2F3 143 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 TMEM250H0YL14 139 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 GAS8-AS1O95177 125 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 TAGLN2P37802 199 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 TWIST1Q15672 202 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 IQCJQ1A5X6 159 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 KRTAP26-1Q6PEX3 210 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 KCNIP4Q6PIL6 250 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 RASL11AQ6T310 242 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 LINC00269Q8N2A0 174 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 GATD1Q8NB37 220 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 RMI2Q96E14 147 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 RPL39LQ96EH5 51 aaKnown RBP8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 CNFNQ9BYD5 112 aa8.99□□□□□ -0.97
SOX2-OT-211ENST00000490005 IGLV4-60A0A075B6I1 120 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 HLA-DQA1P01909 254 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 CRPP02741 224 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 TRGC1P0CF51 173 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 ELOBQ15370 118 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 Q6ZSA8 131 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 C20orf203Q8NBC4 194 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 PGLYRP4Q96LB8 373 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 C1orf43Q9BWL3 253 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 BIN3Q9NQY0 253 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 MYCBP2O75592 4640 aa8.98□□□□□ -0.97
SOX2-OT-211ENST00000490005 DNAH8Q96JB1 4490 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 IGLV10-54A0A075B6I4 117 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 TRBV25-1A0A075B6N4 114 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 IGHV1-24A0A0C4DH33 117 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 GATCO43716 136 aaKnown RBP8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 INAFM2P0DMQ5 153 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 FRZBQ92765 325 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 NIT2Q9NQR4 276 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 PRR34Q9NV39 138 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 COX11Q9Y6N1 276 aa8.97□□□□□ -0.97
SOX2-OT-211ENST00000490005 C9JQL5 133 aa8.96□□□□□ -0.98
SOX2-OT-211ENST00000490005 USP17L23D6RBM5 183 aa8.96□□□□□ -0.98
SOX2-OT-211ENST00000490005 H7C1H1 209 aa8.96□□□□□ -0.98
SOX2-OT-211ENST00000490005 SRP19P09132 144 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms