RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 C16orf95Q9H693 158 aa1.91□□□□□ -2.1
SSR1-209ENST00000488834 FAM60AQ9NP50 221 aa1.91□□□□□ -2.1
SSR1-209ENST00000488834 TP73-AS1Q9UF72 201 aa1.91□□□□□ -2.1
SSR1-209ENST00000488834 KLK5Q9Y337 293 aaPredicted RBP1.91□□□□□ -2.1
SSR1-209ENST00000488834 AMMECR1Q9Y4X0 333 aaPredicted RBP1.91□□□□□ -2.1
SSR1-209ENST00000488834 SERP1Q9Y6X1 66 aa1.91□□□□□ -2.1
SSR1-209ENST00000488834 V9GYV3 84 aa1.91□□□□□ -2.1
SSR1-209ENST00000488834 CEP192Q8TEP8 1941 aa1.91□□□□□ -2.1
SSR1-209ENST00000488834 LTBP4Q8N2S1 1624 aa1.91□□□□□ -2.1
SSR1-209ENST00000488834 TET1Q8NFU7 2136 aa1.9□□□□□ -2.1
SSR1-209ENST00000488834 TRGV5A0A0B4J1U4 118 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 LYZL6O75951 148 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 TCL1BO95988 128 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 PPYP01298 95 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 NPYP01303 97 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 ACYP1P07311 99 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 CGB3P0DN86 165 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 CGB7P0DN87 165 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 COX6A1P12074 109 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 SSR2P43308 183 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 UBE2D3P61077 147 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 UBE2D2P62837 147 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 RPL30P62888 115 aaKnown RBP1.9□□□□□ -2.11
SSR1-209ENST00000488834 FKBP1AP62942 108 aaKnown RBP1.9□□□□□ -2.11
SSR1-209ENST00000488834 QRFPP83859 136 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 RTL8BQ17RB0 113 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 VMA21Q3ZAQ7 101 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 FKBP1CQ5VVH2 108 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 KRTAP13-1Q8IUC0 172 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 C1orf64Q8NEQ6 169 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 RNASE6Q93091 150 aaKnown RBP1.9□□□□□ -2.11
SSR1-209ENST00000488834 WFDC6Q9BQY6 131 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 PHLDA3Q9Y5J5 127 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 TNS1Q9HBL0 1735 aaKnown RBP1.9□□□□□ -2.11
SSR1-209ENST00000488834 HEATR5BQ9P2D3 2071 aa1.9□□□□□ -2.11
SSR1-209ENST00000488834 SSC5DA1L4H1 1573 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 POLEQ07864 2286 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 IGKV1D-43A0A0B4J1Z2 117 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 TRAV41A0A0B4J266 112 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 TRAV17A0A0B4J275 112 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 PIGBOS1A0A0B4J2F0 54 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 MYMXA0A1B0GTQ4 84 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 hADV29S1A0JD25 119 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 A6NED7 52 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 C17orf51A8MQB3 221 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 TMEM14DPA8MWL7 114 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 H3BT86 120 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 ATOX1O00244 68 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 HMGN4O00479 90 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 PLXNB1O43157 2135 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 CST7O76096 145 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 IGHV1-46P01743 117 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 TRGV3P03979 118 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 GYPBP06028 91 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 GCHFRP30047 84 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 HIST1H4AP62805 103 aaKnown RBP1.89□□□□□ -2.11
SSR1-209ENST00000488834 CCL8P80075 99 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 MRPS36P82909 103 aaKnown RBP1.89□□□□□ -2.11
SSR1-209ENST00000488834 TMEM170BQ5T4T1 132 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 C16orf47Q6ZP98 133 aaPredicted RBP1.89□□□□□ -2.11
SSR1-209ENST00000488834 ADM2Q7Z4H4 148 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 C6orf201Q7Z4U5 140 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 LYZL2Q7Z4W2 148 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 C5orf38Q86SI9 138 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 PRR15Q8IV56 129 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 RPP25LQ8N5L8 163 aaKnown RBP1.89□□□□□ -2.11
SSR1-209ENST00000488834 COPS9Q8WXC6 57 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 Q96M85 177 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 TM2D3Q9BRN9 247 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 UPK3BQ9BT76 320 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 RTL8AQ9BWD3 113 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 OTORQ9NRC9 128 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 NHP2Q9NX24 153 aaKnown RBP1.89□□□□□ -2.11
SSR1-209ENST00000488834 HHLA3Q9XRX5 114 aa1.89□□□□□ -2.11
SSR1-209ENST00000488834 TRBV7-3A0A075B6L6 115 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 C16orf90A8MZG2 172 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 K7ERJ3 54 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 UBE2L6O14933 153 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 ZNF80P51504 273 aaPredicted RBP1.88□□□□□ -2.11
SSR1-209ENST00000488834 EFNA4P52798 201 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 TSPEAR-AS2P59090 65 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 C1orf140Q5VVS0 124 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 SLC48A1Q6P1K1 146 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 SDIM1Q6ZPB5 146 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 LCA10Q71F78 164 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 LINC00643Q86TS7 51 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 DEFB106AQ8N104 65 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 ZFAND2AQ8N6M9 145 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 SERP2Q8N6R1 65 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 BORCS8Q96FH0 119 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 MGST2Q99735 147 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 AICDAQ9GZX7 198 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 ZNF407Q9C0G0 2248 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 ESPL1Q14674 2120 aa1.88□□□□□ -2.11
SSR1-209ENST00000488834 CACNA1CQ13936 2221 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 LTBP2Q14767 1821 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 PCNX2A6NKB5 2137 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 TRBV25-1A0A075B6N4 114 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 A0A0D9SEW6 157 aa1.87□□□□□ -2.11
SSR1-209ENST00000488834 TRBV7-6A0A0J9YX20 115 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms