RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 OCC1Q8TAD7 63 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 DAZAP1Q96EP5 407 aaKnown RBP4.83□□□□□ -1.64
UBE4B-209ENST00000487244 SMIM12Q96EX1 92 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 RNASE7Q9H1E1 156 aaKnown RBP4.83□□□□□ -1.64
UBE4B-209ENST00000487244 GTSF1LQ9H1H1 148 aa4.83□□□□□ -1.64
UBE4B-209ENST00000487244 TMA7Q9Y2S6 64 aaKnown RBP4.83□□□□□ -1.64
UBE4B-209ENST00000487244 TMEM250H0YL14 139 aa4.82□□□□□ -1.64
UBE4B-209ENST00000487244 LINC01556Q5JQF7 62 aa4.82□□□□□ -1.64
UBE4B-209ENST00000487244 LELP1Q5T871 98 aa4.82□□□□□ -1.64
UBE4B-209ENST00000487244 KRTAP4-5Q9BYR2 181 aa4.82□□□□□ -1.64
UBE4B-209ENST00000487244 KIF25-AS1Q9Y6Z4 181 aa4.82□□□□□ -1.64
UBE4B-209ENST00000487244 HERC2O95714 4834 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 TRAV8-6A0A0B4J262 113 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 C9JQL5 133 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 EVI2AP22794 236 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 CTRLP40313 264 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 RPS20P60866 119 aaKnown RBP4.81□□□□□ -1.64
UBE4B-209ENST00000487244 RAB4BP61018 213 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 UBE2D3P61077 147 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 UBE2D2P62837 147 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 LYZL1Q6UWQ5 148 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 SPATA12Q7Z6I5 190 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 Q8N1X5 172 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 NEXN-AS1Q8NBZ9 246 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 FAM210AQ96ND0 272 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 AP1S3Q96PC3 154 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 EIF5A2Q9GZV4 153 aaKnown RBP4.81□□□□□ -1.64
UBE4B-209ENST00000487244 RPP21Q9H633 154 aaKnown RBP4.81□□□□□ -1.64
UBE4B-209ENST00000487244 DNAH11Q96DT5 4516 aa4.81□□□□□ -1.64
UBE4B-209ENST00000487244 TRAV9-2A0A087WT02 112 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 TRBV10-1A0A0K0K1A3 114 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 C16orf90A8MZG2 172 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 F5H697 171 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 MGPP08493 103 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 SRP19P09132 144 aaKnown RBP4.8□□□□□ -1.64
UBE4B-209ENST00000487244 BTF3P20290 206 aaKnown RBP4.8□□□□□ -1.64
UBE4B-209ENST00000487244 TEX261Q6UWH6 196 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 DAZ4Q86SG3 579 aaKnown RBP4.8□□□□□ -1.64
UBE4B-209ENST00000487244 OR10G8Q8NGN5 311 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 GTSF1Q8WW33 167 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 DNAJC30Q96LL9 226 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 SMIM7Q9BQ49 75 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 Q9HAA7 133 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 BIN3Q9NQY0 253 aa4.8□□□□□ -1.64
UBE4B-209ENST00000487244 DAZ3Q9NR90 486 aaKnown RBP4.8□□□□□ -1.64
UBE4B-209ENST00000487244 TRBV7-3A0A075B6L6 115 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 XKRY2A2RUG3 117 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 IBA57-AS1B1ANH7 110 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 NTF3P20783 257 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 FOXA3P55318 350 aaPredicted RBP4.79□□□□□ -1.64
UBE4B-209ENST00000487244 CACNG7P62955 275 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 RPL36AP83881 106 aaKnown RBP4.79□□□□□ -1.64
UBE4B-209ENST00000487244 SUMO4Q6EEV6 95 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 LINC01551Q86U37 167 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 C10orf126Q8N4M7 172 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 RPL36ALQ969Q0 106 aaKnown RBP4.79□□□□□ -1.64
UBE4B-209ENST00000487244 KRTAP17-1Q9BYP8 105 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
UBE4B-209ENST00000487244 DYNC1H1Q14204 4646 aaKnown RBP4.78□□□□□ -1.64
UBE4B-209ENST00000487244 A0A087WTM6 91 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 A0A087WWC5 75 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 ZNF727A8MUV8 499 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 F2Z2F3 143 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 K7EP13 123 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 M0QY20 66 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 SMIM17P0DL12 118 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 NTM-AS1Q6ZSK4 140 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 FAM231DQ6ZW35 169 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 NFE4Q86UQ8 179 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 NIT1Q86X76 327 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 DEFB104AQ8WTQ1 72 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 CNFNQ9BYD5 112 aa4.78□□□□□ -1.64
UBE4B-209ENST00000487244 RYR1P21817 5038 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 TRBV6-8A0A0A6YYG3 113 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 TRAV26-2A0A0B4J265 109 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 LRCOL1A6NCL2 159 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 GATCO43716 136 aaKnown RBP4.77□□□□□ -1.65
UBE4B-209ENST00000487244 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 WFDC2Q14508 124 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 LAGE3Q14657 143 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 TWIST1Q15672 202 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 PGLYRP4Q96LB8 373 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 DPH3P1Q9H4G8 78 aa4.77□□□□□ -1.65
UBE4B-209ENST00000487244 A8MWL6 223 aa4.76□□□□□ -1.65
UBE4B-209ENST00000487244 NDUFS6O75380 124 aaKnown RBP4.76□□□□□ -1.65
UBE4B-209ENST00000487244 TRGC1P0CF51 173 aa4.76□□□□□ -1.65
UBE4B-209ENST00000487244 MPV17L2Q567V2 206 aa4.76□□□□□ -1.65
UBE4B-209ENST00000487244 CT83Q5H943 113 aa4.76□□□□□ -1.65
UBE4B-209ENST00000487244 WDR73Q6P4I2 378 aa4.76□□□□□ -1.65
UBE4B-209ENST00000487244 MAPKAPK5-AS1Q8N8E1 139 aa4.76□□□□□ -1.65
UBE4B-209ENST00000487244 KLK12Q9UKR0 248 aa4.76□□□□□ -1.65
UBE4B-209ENST00000487244 A0A087WX48 190 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 HIGD1CA8MV81 97 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 LECT2O14960 151 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 PSCAO43653 123 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 GAS8-AS1O95177 125 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 SLPIP03973 132 aa4.75□□□□□ -1.65
UBE4B-209ENST00000487244 RPL23P62829 140 aaKnown RBP4.75□□□□□ -1.65
UBE4B-209ENST00000487244 ADIRFQ15847 76 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms