RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RPL36ALQ969Q0 106 aaKnown RBP4.69□□□□□ -1.66
VPS50-218ENST00000485994 DAZAP1Q96EP5 407 aaKnown RBP4.69□□□□□ -1.66
VPS50-218ENST00000485994 TM2D2Q9BX73 214 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 MED9Q9NWA0 146 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 COX11Q9Y6N1 276 aa4.69□□□□□ -1.66
VPS50-218ENST00000485994 A0A087WWL8 130 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 TMSB15BA0A087X1C1 80 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 XKRY2A2RUG3 117 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 TMEM250H0YL14 139 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 IGLC6P0CF74 106 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 BCL2P10415 239 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 UBE2D3P61077 147 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 UBE2D2P62837 147 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 RPL19P84098 196 aaKnown RBP4.68□□□□□ -1.66
VPS50-218ENST00000485994 TMEM97Q5BJF2 176 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 SPANXN1Q5VSR9 72 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 NIT1Q86X76 327 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 OR10AG1Q8NH19 301 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 NTN5Q8WTR8 489 aaPredicted RBP4.68□□□□□ -1.66
VPS50-218ENST00000485994 DERL1Q9BUN8 251 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 DNAH8Q96JB1 4490 aa4.68□□□□□ -1.66
VPS50-218ENST00000485994 TRBV20OR9-2A0A075B6H5 130 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 RAB19A4D1S5 217 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 GNG4P50150 75 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 LINC00310P59036 64 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 CACNG7P62955 275 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 ELOBQ15370 118 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 CENPWQ5EE01 88 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 FAM74A4Q5TZK3 123 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 Q8N1X5 172 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.67□□□□□ -1.66
VPS50-218ENST00000485994 DNAJC30Q96LL9 226 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 CNFNQ9BYD5 112 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 ABCA13Q86UQ4 5058 aa4.67□□□□□ -1.66
VPS50-218ENST00000485994 TRBV6-8A0A0A6YYG3 113 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 RBFOX3A6NFN3 312 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 PSCAO43653 123 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 P01737 135 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 IGHV3-30P01768 117 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 IGHV3-33P01772 117 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 SMIM17P0DL12 118 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 IGHV3-30-3P0DP02 117 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 IGHV3-30-5P0DP03 117 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 FOXA3P55318 350 aaPredicted RBP4.66□□□□□ -1.66
VPS50-218ENST00000485994 PKIAP61925 76 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 ATRAIDQ6UW56 229 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 DAZ4Q86SG3 579 aaKnown RBP4.66□□□□□ -1.66
VPS50-218ENST00000485994 FER1L6-AS1Q8NA97 138 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 NEXN-AS1Q8NBZ9 246 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 NUDT10Q8NFP7 164 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 OR2D3Q8NGH3 330 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 FRZBQ92765 325 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 NUDT11Q96G61 164 aa4.66□□□□□ -1.66
VPS50-218ENST00000485994 DAZ3Q9NR90 486 aaKnown RBP4.66□□□□□ -1.66
VPS50-218ENST00000485994 C9JQL5 133 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 H7C1H1 209 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 M0QY20 66 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 NTF3P20783 257 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 GCSHP23434 173 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 XGP55808 180 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 SRSF3P84103 164 aaKnown RBP4.65□□□□□ -1.67
VPS50-218ENST00000485994 Q0VG73 95 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 LYZL1Q6UWQ5 148 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 FAM231DQ6ZW35 169 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 Q8N814 137 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 OCC1Q8TAD7 63 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 RMI2Q96E14 147 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 FAM210AQ96ND0 272 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 AP1S3Q96PC3 154 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 URGCP-MRPS24S4R325 110 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 VPS13BQ7Z7G8 4022 aa4.65□□□□□ -1.67
VPS50-218ENST00000485994 A0A087WX48 190 aa4.64□□□□□ -1.67
VPS50-218ENST00000485994 F5H697 171 aa4.64□□□□□ -1.67
VPS50-218ENST00000485994 SRP19P09132 144 aaKnown RBP4.64□□□□□ -1.67
VPS50-218ENST00000485994 TRGC1P0CF51 173 aa4.64□□□□□ -1.67
VPS50-218ENST00000485994 ZNF56Q15929 161 aa4.64□□□□□ -1.67
VPS50-218ENST00000485994 MAPKAPK5-AS1Q8N8E1 139 aa4.64□□□□□ -1.67
VPS50-218ENST00000485994 DPH3P1Q9H4G8 78 aa4.64□□□□□ -1.67
VPS50-218ENST00000485994 MUC21A0A0G2JKD1 596 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 MUC21A0A140T8X8 626 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 A0A1B0GUV1 79 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 FAM231BA6NCW3 169 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 K7EN84 100 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 GZMBP10144 247 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 CTRLP40313 264 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 KRTAP10-1P60331 282 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 IQCJQ1A5X6 159 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 CT83Q5H943 113 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 CLLU1Q5K131 121 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 KCNIP4Q6PIL6 250 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 NTM-AS1Q6ZSK4 140 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 Q8N976 141 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 PGLYRP4Q96LB8 373 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 TMEM70Q9BUB7 260 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 Q9HAA7 133 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 NIT2Q9NQR4 276 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 PRR34Q9NV39 138 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 KLK12Q9UKR0 248 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 FAT1Q14517 4588 aa4.63□□□□□ -1.67
VPS50-218ENST00000485994 IGLV5-52A0A0A0MRZ9 124 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms