RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 KIAA1549LQ6ZVL6 1849 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 UBR2Q8IWV8 1755 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 SSC5DA1L4H1 1573 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 UNC13BO14795 1591 aa-0.57□□□□□ -2.5
KDM1A-204ENST00000481879 CELSR3Q9NYQ7 3312 aa-0.58□□□□□ -2.5
KDM1A-204ENST00000481879 CCDC171Q6TFL3 1326 aa-0.58□□□□□ -2.5
KDM1A-204ENST00000481879 C2CD3Q4AC94 2353 aa-0.58□□□□□ -2.5
KDM1A-204ENST00000481879 TRAV12-3A0A0B4J271 114 aa-0.58□□□□□ -2.5
KDM1A-204ENST00000481879 PRM1P04553 51 aa-0.58□□□□□ -2.5
KDM1A-204ENST00000481879 SPCS2Q15005 226 aa-0.58□□□□□ -2.5
KDM1A-204ENST00000481879 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.58□□□□□ -2.5
KDM1A-204ENST00000481879 SPTA1P02549 2419 aa-0.58□□□□□ -2.5
KDM1A-204ENST00000481879 AFDNP55196 1824 aaKnown RBP-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 PRKDCP78527 4128 aaKnown RBP-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 BORCS7-ASMTA0A0B4J1R7 106 aa-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 J3KT08 172 aa-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 DEGS1O15121 323 aa-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 TNFSF15O95150 251 aa-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 CMPK1P30085 196 aa-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 TFAMQ00059 246 aaKnown RBP-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 DEFB109BQ30KR1 87 aa-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 CENPHQ9H3R5 247 aa-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 BATF3Q9NR55 127 aa-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 LSM2Q9Y333 95 aaKnown RBP-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 ANK3Q12955 4377 aaKnown RBP-0.59□□□□□ -2.5
KDM1A-204ENST00000481879 LAMA3Q16787 3333 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 LAMC3Q9Y6N6 1575 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 OVOS2A0A0G2JMS6 1433 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 M0R3E3 92 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 RBP4P02753 201 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 PRO0255Q9UI72 69 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 HIGD1AQ9Y241 93 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 V9GYQ6 96 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 ADGBQ8N7X0 1667 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 MYH2Q9UKX2 1941 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 KIDINS220Q9ULH0 1771 aa-0.6□□□□□ -2.51
KDM1A-204ENST00000481879 CCDC168Q8NDH2 2452 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 PCNX1Q96RV3 2341 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 TRAV36DV7A0A075B6V5 113 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 A0A0D9SFI3 127 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 G3V318 75 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 CCDC179H3BU77 68 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 J3QLW9 94 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 WFDC2Q14508 124 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 KLK9Q2XQG4 91 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 TCTE3Q8IZS6 198 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 SKA2Q8WVK7 121 aaPredicted RBP-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 NDUFA12Q9UI09 145 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 DLEC1Q9Y238 1755 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 MTORP42345 2549 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 LRRK2Q5S007 2527 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 ITPR1Q14643 2758 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 CEP295Q9C0D2 2601 aa-0.61□□□□□ -2.51
KDM1A-204ENST00000481879 ATG2AQ2TAZ0 1938 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 M0R2P5 195 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 SPRR2EP22531 72 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 EDDM3BP56851 147 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 KRTAP6-2Q3LI66 62 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 LINC01545Q5VT33 79 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 DDA1Q9BW61 102 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 PTPRMP28827 1452 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 AKAP9Q99996 3911 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 HTTP42858 3142 aa-0.62□□□□□ -2.51
KDM1A-204ENST00000481879 ITPR2Q14571 2701 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 DNAH7Q8WXX0 4024 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 A0A1B0GX51 115 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 SCTP09683 121 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 SPINK8P0C7L1 97 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 SPRR2AP35326 72 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 SPAG11BQ08648 103 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 WFDC6Q9BQY6 131 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 CNFNQ9BYD5 112 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 GINS2Q9Y248 185 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 CMYA5Q8N3K9 4069 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 NUP210Q8TEM1 1887 aaPredicted RBP-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 LAMA1P25391 3075 aa-0.63□□□□□ -2.51
KDM1A-204ENST00000481879 WDR97A6NE52 1622 aa-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 VIRMAQ69YN4 1812 aaKnown RBP-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 PLCE1Q9P212 2302 aa-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 GVINP1Q7Z2Y8 2422 aa-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 GCN1Q92616 2671 aaKnown RBP-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 URB1O60287 2271 aaKnown RBP-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 IBTKQ9P2D0 1353 aaPredicted RBP-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 TRBV10-3A0A0K0K1G6 114 aa-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 TSTD3H0UI37 97 aa-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 YPEL1O60688 119 aa-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 SCP2D1Q9UJQ7 156 aa-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 APOBP04114 4563 aaKnown RBP-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 KIAA0100Q14667 2235 aaKnown RBP-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 MYO7BQ6PIF6 2116 aa-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 DYNC1H1Q14204 4646 aaKnown RBP-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 RIF1Q5UIP0 2472 aaKnown RBP-0.64□□□□□ -2.51
KDM1A-204ENST00000481879 DOCK11Q5JSL3 2073 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 SPG11Q96JI7 2443 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 UHRF1BP1LA0JNW5 1464 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 MYH3P11055 1940 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 TRBV20-1A0A075B6N2 111 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 TRAV1-2A0A0B4J238 106 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 MIC13Q5XKP0 118 aa-0.65□□□□□ -2.51
KDM1A-204ENST00000481879 SMIM15Q7Z3B0 74 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms