RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 RAB4BP61018 213 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 CACNG7P62955 275 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 TWIST1Q15672 202 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 CLLU1Q5K131 121 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 SH2D6Q7Z4S9 175 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 C15orf54Q8N8G6 183 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 GTSF1Q8WW33 167 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 ISOC2Q96AB3 205 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 PGLYRP4Q96LB8 373 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 UPK3BQ9BT76 320 aa4.74□□□□□ -1.65
BRCA1-215ENST00000478531 NBDYA0A0U1RRE5 68 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 SIVA1O15304 175 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 NTF3P20783 257 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 EVI2AP22794 236 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 G0S2P27469 103 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 WFDC10BQ8IUB3 73 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 LINC00518Q8N0U6 118 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 ATP6V0E2Q8NHE4 81 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 PCP4L1A6NKN8 68 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 HIGD1CA8MV81 97 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 TRGC1P0CF51 173 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 OR10J3Q5JRS4 329 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 Q6ZR54 194 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 KRTAP1-5Q9BYS1 174 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 GTSF1LQ9H1H1 148 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 OSTCQ9NRP0 149 aa4.73□□□□□ -1.65
BRCA1-215ENST00000478531 LINC00694P0DN24 101 aa4.72□□□□□ -1.65
BRCA1-215ENST00000478531 RPL36AP83881 106 aaKnown RBP4.72□□□□□ -1.65
BRCA1-215ENST00000478531 TTC32Q5I0X7 151 aa4.72□□□□□ -1.65
BRCA1-215ENST00000478531 OR10G8Q8NGN5 311 aa4.72□□□□□ -1.65
BRCA1-215ENST00000478531 TSKUQ8WUA8 353 aa4.72□□□□□ -1.65
BRCA1-215ENST00000478531 RPL36ALQ969Q0 106 aaKnown RBP4.72□□□□□ -1.65
BRCA1-215ENST00000478531 BORCS7Q96B45 105 aa4.72□□□□□ -1.65
BRCA1-215ENST00000478531 CNFNQ9BYD5 112 aa4.72□□□□□ -1.65
BRCA1-215ENST00000478531 DPH3P1Q9H4G8 78 aa4.72□□□□□ -1.65
BRCA1-215ENST00000478531 V9GYV3 84 aa4.72□□□□□ -1.65
BRCA1-215ENST00000478531 TRBV10-1A0A0K0K1A3 114 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 C1orf134Q5TEV5 83 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 SUMO4Q6EEV6 95 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 SMIM15Q7Z3B0 74 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 NEXN-AS1Q8NBZ9 246 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 KIF25-AS1Q9Y6Z4 181 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 TRBV7-3A0A075B6L6 115 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 TRAV8-6A0A0B4J262 113 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 TRAV26-2A0A0B4J265 109 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 IGHV3-38A0A0C4DH36 116 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 FOXA3P55318 350 aaPredicted RBP4.71□□□□□ -1.66
BRCA1-215ENST00000478531 LINC00315P59091 139 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 LELP1Q5T871 98 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 COMMD7Q86VX2 200 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 GFRA4Q9GZZ7 299 aa4.71□□□□□ -1.66
BRCA1-215ENST00000478531 A0A1B0GUT8 65 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 H7C1H1 209 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 RTL8CO15255 209 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 LORP23490 312 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-215ENST00000478531 TIRAPP58753 221 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 UBE2D3P61077 147 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 UBE2D2P62837 147 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 C6orf223Q8N319 242 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 NUP35Q8NFH5 326 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 NAT8BQ9UHF3 227 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 DNAH11Q96DT5 4516 aa4.7□□□□□ -1.66
BRCA1-215ENST00000478531 FAM231BA6NCW3 169 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 M0QY20 66 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 IGHV3-30P01768 117 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 IGHV3-33P01772 117 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 IGHV3-30-3P0DP02 117 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 IGHV3-30-5P0DP03 117 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 Q8N3U1 123 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-215ENST00000478531 ALKBH7Q9BT30 221 aaPredicted RBP4.69□□□□□ -1.66
BRCA1-215ENST00000478531 TNFRSF18Q9Y5U5 241 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 TRAV9-2A0A087WT02 112 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 PRSS29PA6NIE9 313 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 F8W036 122 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 DNAH10OSP0CZ25 163 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 CDPF1Q6NVV7 123 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 RASL11AQ6T310 242 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 UQCC3Q6UW78 93 aa4.69□□□□□ -1.66
BRCA1-215ENST00000478531 A0A087WWC5 75 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 SMIM27A0A1W2PRY6 76 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 ADCYAP1P18509 176 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 PNRC1Q12796 327 aaPredicted RBP4.68□□□□□ -1.66
BRCA1-215ENST00000478531 RIGQ13278 110 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 LINC01556Q5JQF7 62 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 LINC00336Q6ZUF6 198 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 GATD1Q8NB37 220 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 DEFB104AQ8WTQ1 72 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 URGCP-MRPS24S4R325 110 aa4.68□□□□□ -1.66
BRCA1-215ENST00000478531 TMEM218A2RU14 115 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 CAMPP49913 170 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 MRPL54Q6P161 138 aaKnown RBP4.67□□□□□ -1.66
BRCA1-215ENST00000478531 DAZ4Q86SG3 579 aaKnown RBP4.67□□□□□ -1.66
BRCA1-215ENST00000478531 C10orf126Q8N4M7 172 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 RPL39LQ96EH5 51 aaKnown RBP4.67□□□□□ -1.66
BRCA1-215ENST00000478531 Q9HAA7 133 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 NIT2Q9NQR4 276 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 DAZ3Q9NR90 486 aaKnown RBP4.67□□□□□ -1.66
BRCA1-215ENST00000478531 TRBV6-8A0A0A6YYG3 113 aa4.67□□□□□ -1.66
BRCA1-215ENST00000478531 ZNF561-AS1K7EIQ3 104 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms