RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 HERC2O95714 4834 aa10.48□□□□□ -0.73
HMGA1-206ENST00000478214 M0QY20 66 aa10.48□□□□□ -0.73
HMGA1-206ENST00000478214 TWIST1Q15672 202 aa10.48□□□□□ -0.73
HMGA1-206ENST00000478214 SUMO4Q6EEV6 95 aa10.48□□□□□ -0.73
HMGA1-206ENST00000478214 SPATA12Q7Z6I5 190 aa10.48□□□□□ -0.73
HMGA1-206ENST00000478214 Q9HAA7 133 aa10.48□□□□□ -0.73
HMGA1-206ENST00000478214 DNAH5Q8TE73 4624 aa10.47□□□□□ -0.73
HMGA1-206ENST00000478214 A8MWL6 223 aa10.47□□□□□ -0.73
HMGA1-206ENST00000478214 DAZ4Q86SG3 579 aaKnown RBP10.47□□□□□ -0.73
HMGA1-206ENST00000478214 NIT1Q86X76 327 aa10.47□□□□□ -0.73
HMGA1-206ENST00000478214 DPH3P1Q9H4G8 78 aa10.47□□□□□ -0.73
HMGA1-206ENST00000478214 DAZ3Q9NR90 486 aaKnown RBP10.47□□□□□ -0.73
HMGA1-206ENST00000478214 C16orf90A8MZG2 172 aa10.46□□□□□ -0.73
HMGA1-206ENST00000478214 KRTAP10-2P60368 255 aa10.46□□□□□ -0.73
HMGA1-206ENST00000478214 PEA15Q15121 130 aa10.46□□□□□ -0.73
HMGA1-206ENST00000478214 TMEM241Q24JQ0 296 aa10.46□□□□□ -0.73
HMGA1-206ENST00000478214 FAM74A3Q4VXF1 159 aa10.46□□□□□ -0.73
HMGA1-206ENST00000478214 CT83Q5H943 113 aa10.46□□□□□ -0.73
HMGA1-206ENST00000478214 PGLYRP4Q96LB8 373 aa10.46□□□□□ -0.73
HMGA1-206ENST00000478214 OSTCQ9NRP0 149 aa10.46□□□□□ -0.73
HMGA1-206ENST00000478214 TRBV6-8A0A0A6YYG3 113 aa10.45□□□□□ -0.74
HMGA1-206ENST00000478214 H7C1H1 209 aa10.45□□□□□ -0.74
HMGA1-206ENST00000478214 A0A087WTM6 91 aa10.44□□□□□ -0.74
HMGA1-206ENST00000478214 FOXA3P55318 350 aaPredicted RBP10.44□□□□□ -0.74
HMGA1-206ENST00000478214 RPL23P62829 140 aaKnown RBP10.44□□□□□ -0.74
HMGA1-206ENST00000478214 LAGE3Q14657 143 aa10.44□□□□□ -0.74
HMGA1-206ENST00000478214 RASL11AQ6T310 242 aa10.44□□□□□ -0.74
HMGA1-206ENST00000478214 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.44□□□□□ -0.74
HMGA1-206ENST00000478214 TSKUQ8WUA8 353 aa10.44□□□□□ -0.74
HMGA1-206ENST00000478214 ISOC2Q96AB3 205 aa10.44□□□□□ -0.74
HMGA1-206ENST00000478214 DNAJC30Q96LL9 226 aa10.44□□□□□ -0.74
HMGA1-206ENST00000478214 SMDT1Q9H4I9 107 aa10.44□□□□□ -0.74
HMGA1-206ENST00000478214 URGCP-MRPS24S4R325 110 aa10.44□□□□□ -0.74
HMGA1-206ENST00000478214 ADIRFQ15847 76 aa10.43□□□□□ -0.74
HMGA1-206ENST00000478214 NTM-AS1Q6ZSK4 140 aa10.43□□□□□ -0.74
HMGA1-206ENST00000478214 NAT8Q9UHE5 227 aa10.43□□□□□ -0.74
HMGA1-206ENST00000478214 V9GYV3 84 aa10.43□□□□□ -0.74
HMGA1-206ENST00000478214 A0A087WX48 190 aa10.42□□□□□ -0.74
HMGA1-206ENST00000478214 HIGD1CA8MV81 97 aa10.42□□□□□ -0.74
HMGA1-206ENST00000478214 EREGO14944 169 aa10.42□□□□□ -0.74
HMGA1-206ENST00000478214 PSCAO43653 123 aa10.42□□□□□ -0.74
HMGA1-206ENST00000478214 FUSP35637 526 aaKnown RBP eCLIP10.42□□□□□ -0.74
HMGA1-206ENST00000478214 SMIM15Q7Z3B0 74 aa10.42□□□□□ -0.74
HMGA1-206ENST00000478214 C15orf54Q8N8G6 183 aa10.42□□□□□ -0.74
HMGA1-206ENST00000478214 TRAV8-3A0A0A6YYJ7 113 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 TRAV26-2A0A0B4J265 109 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 TMEM262E9PQX1 116 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 TMEM97Q5BJF2 176 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 GATD1Q8NB37 220 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 CHCHD5Q9BSY4 110 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 CHCHD7Q9BUK0 85 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 GFRA4Q9GZZ7 299 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 NIT2Q9NQR4 276 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 KLK12Q9UKR0 248 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 RYR1P21817 5038 aa10.41□□□□□ -0.74
HMGA1-206ENST00000478214 A0A1B0GUT8 65 aa10.4□□□□□ -0.74
HMGA1-206ENST00000478214 FAM231BA6NCW3 169 aa10.4□□□□□ -0.74
HMGA1-206ENST00000478214 KCNIP4Q6PIL6 250 aa10.4□□□□□ -0.74
HMGA1-206ENST00000478214 BORCS7Q96B45 105 aa10.4□□□□□ -0.74
HMGA1-206ENST00000478214 LRCOL1A6NCL2 159 aa10.39□□□□□ -0.75
HMGA1-206ENST00000478214 RAB14P61106 215 aa10.39□□□□□ -0.75
HMGA1-206ENST00000478214 MPV17L2Q567V2 206 aa10.39□□□□□ -0.75
HMGA1-206ENST00000478214 TM2D2Q9BX73 214 aa10.39□□□□□ -0.75
HMGA1-206ENST00000478214 HSPG2P98160 4391 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 TRBV25-1A0A075B6N4 114 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 GAGE6Q13070 117 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 ELOBQ15370 118 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 IQCJQ1A5X6 159 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 NUP35Q8NFH5 326 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 DEFB104AQ8WTQ1 72 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 UBE2WQ96B02 151 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 PGPEP1Q9NXJ5 209 aa10.38□□□□□ -0.75
HMGA1-206ENST00000478214 APOBP04114 4563 aaKnown RBP10.37□□□□□ -0.75
HMGA1-206ENST00000478214 IGHV1-24A0A0C4DH33 117 aa10.37□□□□□ -0.75
HMGA1-206ENST00000478214 Q8N976 141 aa10.37□□□□□ -0.75
HMGA1-206ENST00000478214 RPL39LQ96EH5 51 aaKnown RBP10.37□□□□□ -0.75
HMGA1-206ENST00000478214 PKIAP61925 76 aa10.36□□□□□ -0.75
HMGA1-206ENST00000478214 ATRAIDQ6UW56 229 aa10.36□□□□□ -0.75
HMGA1-206ENST00000478214 FRZBQ92765 325 aa10.36□□□□□ -0.75
HMGA1-206ENST00000478214 TMEM191AQ9H0A3 160 aa10.36□□□□□ -0.75
HMGA1-206ENST00000478214 IGKV2D-24A0A075B6R9 120 aa10.35□□□□□ -0.75
HMGA1-206ENST00000478214 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
HMGA1-206ENST00000478214 RBX1P62877 108 aa10.35□□□□□ -0.75
HMGA1-206ENST00000478214 RIGQ13278 110 aa10.35□□□□□ -0.75
HMGA1-206ENST00000478214 WFDC2Q14508 124 aa10.35□□□□□ -0.75
HMGA1-206ENST00000478214 CLLU1Q5K131 121 aa10.35□□□□□ -0.75
HMGA1-206ENST00000478214 MAPKAPK5-AS1Q8N8E1 139 aa10.35□□□□□ -0.75
HMGA1-206ENST00000478214 NAT8BQ9UHF3 227 aa10.35□□□□□ -0.75
HMGA1-206ENST00000478214 SMIM27A0A1W2PRY6 76 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 GAS8-AS1O95177 125 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 IFITM2Q01629 132 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 COTL1Q14019 142 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 CDPF1Q6NVV7 123 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 ENHOQ6UWT2 76 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 RMI2Q96E14 147 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 RNF185Q96GF1 192 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 TMEM243Q9BU79 118 aa10.34□□□□□ -0.75
HMGA1-206ENST00000478214 LECT2O14960 151 aa10.33□□□□□ -0.76
HMGA1-206ENST00000478214 RAB4AP20338 218 aa10.33□□□□□ -0.76
HMGA1-206ENST00000478214 AMN1Q8IY45 258 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms