RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 EDDM3BP56851 147 aa-1.55□□□□□ -2.66
NCKAP1-204ENST00000477988 GNG5P63218 68 aa-1.55□□□□□ -2.66
NCKAP1-204ENST00000477988 FRYQ5TBA9 3013 aa-1.55□□□□□ -2.66
NCKAP1-204ENST00000477988 PRDM2Q13029 1718 aa-1.55□□□□□ -2.66
NCKAP1-204ENST00000477988 GCN1Q92616 2671 aaKnown RBP-1.55□□□□□ -2.66
NCKAP1-204ENST00000477988 ADGRB1O14514 1584 aa-1.55□□□□□ -2.66
NCKAP1-204ENST00000477988 GAPVD1Q14C86 1478 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 IBTKQ9P2D0 1353 aaPredicted RBP-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 TRAV16A0A0A6YYK6 109 aaPredicted RBP-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 TRAV2A0A0B4J234 112 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 CLPSL1A2RUU4 121 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 GABARAPH6UMI1 98 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 H7C1C5 153 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 PGRMC1O00264 195 aaKnown RBP-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 NPFFO15130 113 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 CETN3O15182 167 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 CKS2P33552 79 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 LCN6P62502 163 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 CFAP126Q5VTH2 177 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 LLPHQ9BRT6 129 aaKnown RBP-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 SH3BGRL3Q9H299 93 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 LYRM2Q9NU23 88 aaPredicted RBP-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 ARMC1Q9NVT9 282 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 MED11Q9P086 117 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 NBEAQ8NFP9 2946 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.56□□□□□ -2.662e-6■■■■□ 24
NCKAP1-204ENST00000477988 CEP295Q9C0D2 2601 aa-1.56□□□□□ -2.66
NCKAP1-204ENST00000477988 NSD3Q9BZ95 1437 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 PTPN23Q9H3S7 1636 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 DNAH8Q96JB1 4490 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 RPP14O95059 124 aaKnown RBP-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 SLC25A6P12236 298 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 ARF6P62330 175 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 MRPS15P82914 257 aaKnown RBP-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 LTC4SQ16873 150 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 C3orf33Q6P1S2 294 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 TEX29Q8N6K0 151 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 DEFB105AQ8NG35 78 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 ATP6V1G3Q96LB4 118 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 PRAP1Q96NZ9 151 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 TAS2R8Q9NYW2 309 aa-1.57□□□□□ -2.66
NCKAP1-204ENST00000477988 COL4A6Q14031 1691 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 ACACAQ13085 2346 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 TRAV12-3A0A0B4J271 114 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 TRBV7-6A0A0J9YX20 115 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 PNMA8CA0A1B0GUJ8 204 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 CRYGSP22914 178 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 SDC2P34741 201 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 SLC25A26Q70HW3 274 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 BRK1Q8WUW1 75 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 LXNQ9BS40 222 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 C9orf16Q9BUW7 83 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 AGPAT4-IT1Q9H0P7 198 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 LAMTOR3Q9UHA4 124 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 SSR3Q9UNL2 185 aa-1.58□□□□□ -2.66
NCKAP1-204ENST00000477988 ZNF236Q9UL36 1845 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 MYH3P11055 1940 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 H0YJX3 145 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 J3KT08 172 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 HBDP02042 147 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 SRP9P49458 86 aaKnown RBP-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 CCL7P80098 99 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 SPCS2Q15005 226 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 METTL1Q9UBP6 276 aaKnown RBP-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 SS18L2Q9UHA2 77 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 ERG28Q9UKR5 140 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 UHRF1BP1LA0JNW5 1464 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 PLB1Q6P1J6 1458 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 GOLGA4Q13439 2230 aaKnown RBP-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 EYSQ5T1H1 3165 aa-1.59□□□□□ -2.66
NCKAP1-204ENST00000477988 TRIOO75962 3097 aa-1.6□□□□□ -2.66
NCKAP1-204ENST00000477988 TULP4Q9NRJ4 1543 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 C5orf42Q9H799 3197 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 MRC1P22897 1456 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 PXDNQ92626 1479 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 TRAV13-1A0A0B4J241 112 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 SMIM23A6NLE4 172 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 ATG12O94817 140 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 PLGLB1Q02325 96 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 HSD17B12Q53GQ0 312 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 TMEM91Q6ZNR0 172 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 LINC00305Q7Z4B0 112 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 CNPY4Q8N129 248 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 STX19Q8N4C7 294 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 NPVFQ9HCQ7 196 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 NUBP2Q9Y5Y2 271 aa-1.6□□□□□ -2.67
NCKAP1-204ENST00000477988 ITPR2Q14571 2701 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 PPP5D1E7EU14 171 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 S100A3P33764 101 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 PPP1R2P41236 205 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 UBE2D1P51668 147 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 PCBD1P61457 104 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 AKR1C8PQ5T2L2 129 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 CROCCP2Q86T23 111 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 BAGE3Q86Y29 109 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 DYNLRB2Q8TF09 96 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 GINS3Q9BRX5 216 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 SLC35B3Q9H1N7 401 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 SRCAPQ6ZRS2 3230 aa-1.61□□□□□ -2.67
NCKAP1-204ENST00000477988 S100A6P06703 90 aa-1.62□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms