RNA–Protein interactions for RNA: ENST00000477528.5

HDAC6-220, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 4,832 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-220ENST00000477528 CRIP2P52943 208 aaPredicted RBP11□□□□□ -0.65
HDAC6-220ENST00000477528 PRR9Q5T870 116 aa10.99□□□□□ -0.65
HDAC6-220ENST00000477528 IGHV4-4A0A075B6R2 117 aa10.99□□□□□ -0.65
HDAC6-220ENST00000477528 C10orf99Q6UWK7 81 aa10.98□□□□□ -0.65
HDAC6-220ENST00000477528 MAP6D1Q9H9H5 199 aa10.98□□□□□ -0.65
HDAC6-220ENST00000477528 PRSS47A8MTI9 375 aa10.98□□□□□ -0.65
HDAC6-220ENST00000477528 Q6ZS46 218 aa10.98□□□□□ -0.65
HDAC6-220ENST00000477528 NRACQ8N912 160 aa10.98□□□□□ -0.65
HDAC6-220ENST00000477528 PPDPFLQ8WWR9 84 aa10.98□□□□□ -0.65
HDAC6-220ENST00000477528 C16orf74Q96GX8 76 aa10.98□□□□□ -0.65
HDAC6-220ENST00000477528 TRAV8-3A0A0A6YYJ7 113 aa10.97□□□□□ -0.65
HDAC6-220ENST00000477528 Q71RC1 249 aaPredicted RBP10.97□□□□□ -0.65
HDAC6-220ENST00000477528 NEXN-AS1Q8NBZ9 246 aa10.97□□□□□ -0.65
HDAC6-220ENST00000477528 K7EQD1 137 aa10.97□□□□□ -0.65
HDAC6-220ENST00000477528 CFC1BP0CG36 223 aa10.97□□□□□ -0.65
HDAC6-220ENST00000477528 CFC1P0CG37 223 aa10.97□□□□□ -0.65
HDAC6-220ENST00000477528 PRRC2CQ9Y520 2896 aaKnown RBP10.97□□□□□ -0.65
HDAC6-220ENST00000477528 C10orf126Q8N4M7 172 aa10.97□□□□□ -0.65
HDAC6-220ENST00000477528 HIVEP3Q5T1R4 2406 aa10.97□□□□□ -0.65
HDAC6-220ENST00000477528 OVOL2Q9BRP0 275 aa10.96□□□□□ -0.65
HDAC6-220ENST00000477528 DNAJC9-AS1A6NH13 148 aa10.96□□□□□ -0.65
HDAC6-220ENST00000477528 H3BMM0 161 aa10.96□□□□□ -0.65
HDAC6-220ENST00000477528 DAD1P61803 113 aa10.96□□□□□ -0.65
HDAC6-220ENST00000477528 DAZ2Q13117 558 aaKnown RBP10.96□□□□□ -0.65
HDAC6-220ENST00000477528 DAZ4Q86SG3 579 aaKnown RBP10.96□□□□□ -0.65
HDAC6-220ENST00000477528 DAZ3Q9NR90 486 aaKnown RBP10.96□□□□□ -0.65
HDAC6-220ENST00000477528 APOC4P55056 127 aa10.96□□□□□ -0.66
HDAC6-220ENST00000477528 KLLNB2CW77 178 aa10.95□□□□□ -0.66
HDAC6-220ENST00000477528 RNASE3P12724 160 aaKnown RBP10.95□□□□□ -0.66
HDAC6-220ENST00000477528 PSMG3-AS1Q96PY0 264 aa10.95□□□□□ -0.66
HDAC6-220ENST00000477528 RNASE8Q8TDE3 154 aaKnown RBP10.95□□□□□ -0.66
HDAC6-220ENST00000477528 NOTCH2Q04721 2471 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 TRBV7-3A0A075B6L6 115 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 GAS8-AS1O95177 125 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 AVPP01185 164 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 SCGB1A1P11684 91 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 CITED2Q99967 270 aaPredicted RBP10.94□□□□□ -0.66
HDAC6-220ENST00000477528 PTPN13Q12923 2485 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 ZNF702PQ9H963 129 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 S100A7L2Q5SY68 101 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 PTPRBP23467 1997 aa10.94□□□□□ -0.66
HDAC6-220ENST00000477528 IGKV2D-26A0A0A0MRZ7 120 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 BRI3O95415 125 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 Q9H8V8 135 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 A4D1N5 150 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 LAMA2P24043 3122 aaKnown RBP10.93□□□□□ -0.66
HDAC6-220ENST00000477528 SLC25A20O43772 301 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 GAGE2BQ13066 116 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 GAGE2EQ4V326 116 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 OPRPNQ99935 248 aaPredicted RBP10.93□□□□□ -0.66
HDAC6-220ENST00000477528 GAGE2DQ9UEU5 116 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 F5H768 121 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 DEFB114Q30KQ6 69 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 MUSTN1Q8IVN3 82 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 DCANP1Q8TF63 244 aa10.93□□□□□ -0.66
HDAC6-220ENST00000477528 ZNF843Q8N446 348 aa10.92□□□□□ -0.66
HDAC6-220ENST00000477528 IFITM1P13164 125 aa10.92□□□□□ -0.66
HDAC6-220ENST00000477528 PIFOQ8TCI5 191 aa10.92□□□□□ -0.66
HDAC6-220ENST00000477528 ZFAND6Q6FIF0 208 aa10.92□□□□□ -0.66
HDAC6-220ENST00000477528 C2orf91Q6ZV80 131 aa10.92□□□□□ -0.66
HDAC6-220ENST00000477528 UBE2WQ96B02 151 aa10.92□□□□□ -0.66
HDAC6-220ENST00000477528 GHRHP01286 108 aa10.92□□□□□ -0.66
HDAC6-220ENST00000477528 RPL32P62910 135 aaKnown RBP10.92□□□□□ -0.66
HDAC6-220ENST00000477528 TM2D2Q9BX73 214 aa10.92□□□□□ -0.66
HDAC6-220ENST00000477528 M0QY20 66 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 SPTBN4Q9H254 2564 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 PFN2P35080 140 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 HIVEP2P31629 2446 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 TMEM263Q8WUH6 116 aaKnown RBP10.91□□□□□ -0.66
HDAC6-220ENST00000477528 CCDC168Q8NDH2 2452 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 WNK1Q9H4A3 2382 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 TRBV6-5A0A0K0K1A5 114 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 TEX48A0A1B0GUV7 120 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 Q6ZQT7 251 aa10.91□□□□□ -0.66
HDAC6-220ENST00000477528 HERV-K104P63124 156 aa10.9□□□□□ -0.66
HDAC6-220ENST00000477528 SLC25A29Q8N8R3 303 aa10.9□□□□□ -0.66
HDAC6-220ENST00000477528 ANAPC13Q9BS18 74 aa10.9□□□□□ -0.66
HDAC6-220ENST00000477528 GAGE12HA6NDE8 117 aa10.9□□□□□ -0.66
HDAC6-220ENST00000477528 WFDC11Q8NEX6 87 aa10.9□□□□□ -0.66
HDAC6-220ENST00000477528 TRBV27A0A0K0K1C4 114 aa10.9□□□□□ -0.66
HDAC6-220ENST00000477528 TRBV10-1A0A0K0K1A3 114 aa10.9□□□□□ -0.67
HDAC6-220ENST00000477528 CHD8Q9HCK8 2581 aa10.89□□□□□ -0.67
HDAC6-220ENST00000477528 P0DMU3 169 aa10.89□□□□□ -0.67
HDAC6-220ENST00000477528 FAM231AP0DMU4 169 aa10.89□□□□□ -0.67
HDAC6-220ENST00000477528 FAM231CP0DMU5 169 aa10.89□□□□□ -0.67
HDAC6-220ENST00000477528 Q6ZSV7 163 aa10.89□□□□□ -0.67
HDAC6-220ENST00000477528 IGHV1-58A0A0C4DH39 117 aa10.88□□□□□ -0.67
HDAC6-220ENST00000477528 C9orf66Q5T8R8 295 aa10.88□□□□□ -0.67
HDAC6-220ENST00000477528 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
HDAC6-220ENST00000477528 TRAV13-2A0A0B4J235 113 aa10.88□□□□□ -0.67
HDAC6-220ENST00000477528 SH2D6Q7Z4S9 175 aa10.88□□□□□ -0.67
HDAC6-220ENST00000477528 VSIG2Q96IQ7 327 aa10.88□□□□□ -0.67
HDAC6-220ENST00000477528 NACAE9PAV3 2078 aa10.87□□□□□ -0.67
HDAC6-220ENST00000477528 C9orf85Q96MD7 179 aa10.87□□□□□ -0.67
HDAC6-220ENST00000477528 ZNF580Q9UK33 172 aa10.87□□□□□ -0.67
HDAC6-220ENST00000477528 IGHV3-30-3P0DP02 117 aa10.87□□□□□ -0.67
HDAC6-220ENST00000477528 TRAV4A0A0B4J268 109 aa10.87□□□□□ -0.67
HDAC6-220ENST00000477528 WFDC2Q14508 124 aa10.87□□□□□ -0.67
HDAC6-220ENST00000477528 MYO9AB2RTY4 2548 aa10.87□□□□□ -0.67
HDAC6-220ENST00000477528 A0A096LPF7 62 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms