RNA–Protein interactions for RNA: ENST00000475717.1

TOP2B-206, Transcript of DNA topoisomerase II beta, humanhuman

TSL 4

Gene TOP2B, Length 540 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-206ENST00000475717 IGF2RP11717 2491 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 TTC28Q96AY4 2481 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 GVQW2A0A096LPI5 108 aaPredicted RBP0.74□□□□□ -2.29
TOP2B-206ENST00000475717 GNG7O60262 68 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 KRTAP2-3P0C7H8 128 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 HIST1H1DP16402 221 aaKnown RBP0.74□□□□□ -2.29
TOP2B-206ENST00000475717 VMO1Q7Z5L0 202 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 SMIM11BQ8TCY0 68 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 SEC11CQ9BY50 192 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 KRTAP2-4Q9BYR9 128 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 KRTAP2-1Q9BYU5 128 aa0.74□□□□□ -2.29
TOP2B-206ENST00000475717 PTPRZ1P23471 2315 aaPredicted RBP0.73□□□□□ -2.29
TOP2B-206ENST00000475717 DOCK1Q14185 1865 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 CACNA1CQ13936 2221 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 IBTKQ9P2D0 1353 aaPredicted RBP0.73□□□□□ -2.29
TOP2B-206ENST00000475717 FAM25AB3EWG3 89 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 FAM25CB3EWG5 89 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 FAM25GB3EWG6 89 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 K7EP13 123 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 EDDM3BP56851 147 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 COPS9Q8WXC6 57 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 KDM6BO15054 1643 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 ABCA12Q86UK0 2595 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 ZNF518AQ6AHZ1 1483 aa0.73□□□□□ -2.29
TOP2B-206ENST00000475717 ZNF818PQ6ZRF7 136 aa0.72□□□□□ -2.29
TOP2B-206ENST00000475717 CLPSL1A2RUU4 121 aa0.71□□□□□ -2.3
TOP2B-206ENST00000475717 AGPAT4-IT1Q9H0P7 198 aa0.71□□□□□ -2.3
TOP2B-206ENST00000475717 SSC5DA1L4H1 1573 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 LAMC3Q9Y6N6 1575 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 TRBV10-3A0A0K0K1G6 114 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 APODP05090 189 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 ACYP2P14621 99 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 CCL8P80075 99 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 KRTAP21-1Q3LI58 79 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 PROK2Q9HC23 129 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 POLQO75417 2590 aa0.7□□□□□ -2.3
TOP2B-206ENST00000475717 TRGV1A0A0A0MS02 117 aa0.69□□□□□ -2.3
TOP2B-206ENST00000475717 APOC4-APOC2K7ER74 178 aa0.69□□□□□ -2.3
TOP2B-206ENST00000475717 SNRNP25Q9BV90 132 aaKnown RBP0.69□□□□□ -2.3
TOP2B-206ENST00000475717 RERGLQ9H628 205 aa0.69□□□□□ -2.3
TOP2B-206ENST00000475717 CFTRP13569 1480 aa0.68□□□□□ -2.3
TOP2B-206ENST00000475717 MEIG1Q5JSS6 88 aa0.68□□□□□ -2.3
TOP2B-206ENST00000475717 C1orf54Q8WWF1 131 aa0.68□□□□□ -2.3
TOP2B-206ENST00000475717 SCP2D1Q9UJQ7 156 aa0.68□□□□□ -2.3
TOP2B-206ENST00000475717 IFT140Q96RY7 1462 aa0.67□□□□□ -2.3
TOP2B-206ENST00000475717 AHCTF1Q8WYP5 2266 aa0.67□□□□□ -2.3
TOP2B-206ENST00000475717 ASXL3Q9C0F0 2248 aa0.67□□□□□ -2.3
TOP2B-206ENST00000475717 SARNPP82979 210 aaKnown RBP0.67□□□□□ -2.3
TOP2B-206ENST00000475717 SPINK6Q6UWN8 80 aa0.67□□□□□ -2.3
TOP2B-206ENST00000475717 WFDC6Q9BQY6 131 aa0.67□□□□□ -2.3
TOP2B-206ENST00000475717 LINC00312Q9Y6C7 94 aa0.67□□□□□ -2.3
TOP2B-206ENST00000475717 TCHHQ07283 1943 aa0.67□□□□□ -2.3
TOP2B-206ENST00000475717 PIGBOS1A0A0B4J2F0 54 aa0.66□□□□□ -2.3
TOP2B-206ENST00000475717 TMEM14DPA8MWL7 114 aa0.66□□□□□ -2.3
TOP2B-206ENST00000475717 LSM10Q969L4 123 aaKnown RBP0.66□□□□□ -2.3
TOP2B-206ENST00000475717 SERP1Q9Y6X1 66 aa0.66□□□□□ -2.3
TOP2B-206ENST00000475717 LRRC37A3O60309 1634 aa0.66□□□□□ -2.3
TOP2B-206ENST00000475717 PRDM2Q13029 1718 aa0.66□□□□□ -2.3
TOP2B-206ENST00000475717 ARAP2Q8WZ64 1704 aa0.65□□□□□ -2.31
TOP2B-206ENST00000475717 Q6ZRX8 168 aa0.65□□□□□ -2.31
TOP2B-206ENST00000475717 IFT172Q9UG01 1749 aa0.64□□□□□ -2.31
TOP2B-206ENST00000475717 CELSR2Q9HCU4 2923 aa0.64□□□□□ -2.31
TOP2B-206ENST00000475717 SIX6O95475 246 aa0.64□□□□□ -2.31
TOP2B-206ENST00000475717 INSL4Q14641 139 aa0.64□□□□□ -2.31
TOP2B-206ENST00000475717 C12orf73Q69YU5 71 aa0.64□□□□□ -2.31
TOP2B-206ENST00000475717 NAA60Q9H7X0 242 aa0.64□□□□□ -2.31
TOP2B-206ENST00000475717 NAIPQ13075 1403 aa0.64□□□□□ -2.31
TOP2B-206ENST00000475717 HCG22E2RYF7 251 aa0.63□□□□□ -2.31
TOP2B-206ENST00000475717 NMBP08949 121 aa0.63□□□□□ -2.31
TOP2B-206ENST00000475717 BTG2P78543 158 aa0.63□□□□□ -2.31
TOP2B-206ENST00000475717 RBM3P98179 157 aaKnown RBP0.63□□□□□ -2.31
TOP2B-206ENST00000475717 Q6AWC8 147 aa0.63□□□□□ -2.31
TOP2B-206ENST00000475717 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.63□□□□□ -2.31
TOP2B-206ENST00000475717 CASKIN1Q8WXD9 1431 aa0.63□□□□□ -2.31
TOP2B-206ENST00000475717 PLXNB2O15031 1838 aa0.62□□□□□ -2.31
TOP2B-206ENST00000475717 PIEZO1Q92508 2521 aa0.62□□□□□ -2.31
TOP2B-206ENST00000475717 FGF7P21781 194 aa0.62□□□□□ -2.31
TOP2B-206ENST00000475717 GCHFRP30047 84 aa0.62□□□□□ -2.31
TOP2B-206ENST00000475717 Q8N8P6 123 aa0.62□□□□□ -2.31
TOP2B-206ENST00000475717 ZFYVE26Q68DK2 2539 aa0.62□□□□□ -2.31
TOP2B-206ENST00000475717 UNC13BO14795 1591 aa0.62□□□□□ -2.31
TOP2B-206ENST00000475717 PLCE1Q9P212 2302 aa0.61□□□□□ -2.31
TOP2B-206ENST00000475717 MBD5Q9P267 1494 aa0.61□□□□□ -2.31
TOP2B-206ENST00000475717 TRAV13-2A0A0B4J235 113 aa0.61□□□□□ -2.31
TOP2B-206ENST00000475717 EFCAB10A6NFE3 127 aa0.61□□□□□ -2.31
TOP2B-206ENST00000475717 WNK3Q9BYP7 1800 aa0.61□□□□□ -2.31
TOP2B-206ENST00000475717 MAST4O15021 2626 aa0.61□□□□□ -2.31
TOP2B-206ENST00000475717 OTOGQ6ZRI0 2925 aa0.61□□□□□ -2.31
TOP2B-206ENST00000475717 PSME4Q14997 1843 aa0.6□□□□□ -2.31
TOP2B-206ENST00000475717 TRAV1-2A0A0B4J238 106 aa0.6□□□□□ -2.31
TOP2B-206ENST00000475717 SMIM6P0DI80 62 aa0.6□□□□□ -2.31
TOP2B-206ENST00000475717 Q56UQ5 140 aa0.6□□□□□ -2.31
TOP2B-206ENST00000475717 RPL13AP3Q6NVV1 102 aa0.6□□□□□ -2.31
TOP2B-206ENST00000475717 ZMYM4Q5VZL5 1548 aa0.59□□□□□ -2.31
TOP2B-206ENST00000475717 NALCNQ8IZF0 1738 aa0.59□□□□□ -2.31
TOP2B-206ENST00000475717 LOC100130705A0A1B0GUX0 176 aa0.59□□□□□ -2.31
TOP2B-206ENST00000475717 SPAARA0A1B0GVQ0 90 aa0.59□□□□□ -2.31
TOP2B-206ENST00000475717 COX6A2Q02221 97 aa0.59□□□□□ -2.31
TOP2B-206ENST00000475717 Q5VV11 94 aa0.59□□□□□ -2.31
TOP2B-206ENST00000475717 GOLGA3Q08378 1498 aa0.59□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms