RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 GATCO43716 136 aaKnown RBP10.73□□□□□ -0.69
ITGB1-210ENST00000474568 NTF3P20783 257 aa10.73□□□□□ -0.69
ITGB1-210ENST00000474568 SMIM7Q9BQ49 75 aa10.73□□□□□ -0.69
ITGB1-210ENST00000474568 URGCP-MRPS24S4R325 110 aa10.73□□□□□ -0.69
ITGB1-210ENST00000474568 SRP19P09132 144 aaKnown RBP10.72□□□□□ -0.69
ITGB1-210ENST00000474568 TWIST1Q15672 202 aa10.72□□□□□ -0.69
ITGB1-210ENST00000474568 SUMO4Q6EEV6 95 aa10.72□□□□□ -0.69
ITGB1-210ENST00000474568 NIT1Q86X76 327 aa10.72□□□□□ -0.69
ITGB1-210ENST00000474568 APOBP04114 4563 aaKnown RBP10.71□□□□□ -0.69
ITGB1-210ENST00000474568 TRGC1P0CF51 173 aa10.71□□□□□ -0.69
ITGB1-210ENST00000474568 CTRLP40313 264 aa10.71□□□□□ -0.69
ITGB1-210ENST00000474568 GTSF1Q8WW33 167 aa10.71□□□□□ -0.69
ITGB1-210ENST00000474568 HSPG2P98160 4391 aa10.71□□□□□ -0.7
ITGB1-210ENST00000474568 ZNF727A8MUV8 499 aa10.7□□□□□ -0.7
ITGB1-210ENST00000474568 TMEM262E9PQX1 116 aa10.7□□□□□ -0.7
ITGB1-210ENST00000474568 TEX261Q6UWH6 196 aa10.7□□□□□ -0.7
ITGB1-210ENST00000474568 DNAJC30Q96LL9 226 aa10.7□□□□□ -0.7
ITGB1-210ENST00000474568 DPH3P1Q9H4G8 78 aa10.7□□□□□ -0.7
ITGB1-210ENST00000474568 KLK12Q9UKR0 248 aa10.7□□□□□ -0.7
ITGB1-210ENST00000474568 A0A087WX48 190 aa10.69□□□□□ -0.7
ITGB1-210ENST00000474568 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
ITGB1-210ENST00000474568 M0QY20 66 aa10.69□□□□□ -0.7
ITGB1-210ENST00000474568 LAGE3Q14657 143 aa10.69□□□□□ -0.7
ITGB1-210ENST00000474568 KCNIP4Q6PIL6 250 aa10.69□□□□□ -0.7
ITGB1-210ENST00000474568 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.69□□□□□ -0.7
ITGB1-210ENST00000474568 DEFB104AQ8WTQ1 72 aa10.69□□□□□ -0.7
ITGB1-210ENST00000474568 PGLYRP4Q96LB8 373 aa10.69□□□□□ -0.7
ITGB1-210ENST00000474568 SRSF3P84103 164 aaKnown RBP10.68□□□□□ -0.7
ITGB1-210ENST00000474568 FAM231DQ6ZW35 169 aa10.68□□□□□ -0.7
ITGB1-210ENST00000474568 LINC01551Q86U37 167 aa10.68□□□□□ -0.7
ITGB1-210ENST00000474568 CHCHD5Q9BSY4 110 aa10.68□□□□□ -0.7
ITGB1-210ENST00000474568 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
ITGB1-210ENST00000474568 TRAV8-3A0A0A6YYJ7 113 aa10.67□□□□□ -0.7
ITGB1-210ENST00000474568 LRCOL1A6NCL2 159 aa10.67□□□□□ -0.7
ITGB1-210ENST00000474568 C9JQL5 133 aa10.67□□□□□ -0.7
ITGB1-210ENST00000474568 H7C1H1 209 aa10.67□□□□□ -0.7
ITGB1-210ENST00000474568 FOXA3P55318 350 aaPredicted RBP10.67□□□□□ -0.7
ITGB1-210ENST00000474568 WDR73Q6P4I2 378 aa10.67□□□□□ -0.7
ITGB1-210ENST00000474568 NTM-AS1Q6ZSK4 140 aa10.67□□□□□ -0.7
ITGB1-210ENST00000474568 UBE2WQ96B02 151 aa10.67□□□□□ -0.7
ITGB1-210ENST00000474568 TRAV26-2A0A0B4J265 109 aa10.66□□□□□ -0.7
ITGB1-210ENST00000474568 A8MWL6 223 aa10.66□□□□□ -0.7
ITGB1-210ENST00000474568 LECT2O14960 151 aa10.66□□□□□ -0.7
ITGB1-210ENST00000474568 RASL11AQ6T310 242 aa10.66□□□□□ -0.7
ITGB1-210ENST00000474568 TM2D2Q9BX73 214 aa10.66□□□□□ -0.7
ITGB1-210ENST00000474568 CNFNQ9BYD5 112 aa10.66□□□□□ -0.7
ITGB1-210ENST00000474568 IGKV2D-24A0A075B6R9 120 aa10.65□□□□□ -0.7
ITGB1-210ENST00000474568 NDUFS6O75380 124 aaKnown RBP10.65□□□□□ -0.7
ITGB1-210ENST00000474568 GAGE6Q13070 117 aa10.65□□□□□ -0.7
ITGB1-210ENST00000474568 WFDC2Q14508 124 aa10.65□□□□□ -0.7
ITGB1-210ENST00000474568 MPV17L2Q567V2 206 aa10.65□□□□□ -0.7
ITGB1-210ENST00000474568 C15orf54Q8N8G6 183 aa10.65□□□□□ -0.7
ITGB1-210ENST00000474568 SMIM15Q7Z3B0 74 aa10.64□□□□□ -0.71
ITGB1-210ENST00000474568 Q8N976 141 aa10.64□□□□□ -0.71
ITGB1-210ENST00000474568 CHCHD7Q9BUK0 85 aa10.64□□□□□ -0.71
ITGB1-210ENST00000474568 TRBV25-1A0A075B6N4 114 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 CDK2AP2O75956 126 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
ITGB1-210ENST00000474568 PEA15Q15121 130 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 ELOBQ15370 118 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 ADIRFQ15847 76 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 TMEM241Q24JQ0 296 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 TMEM97Q5BJF2 176 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 CT83Q5H943 113 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 CDPF1Q6NVV7 123 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 ATRAIDQ6UW56 229 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 Q8N814 137 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 MAPKAPK5-AS1Q8N8E1 139 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 GATD1Q8NB37 220 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 BAALCQ8WXS3 180 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 NIT2Q9NQR4 276 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 OSTCQ9NRP0 149 aa10.63□□□□□ -0.71
ITGB1-210ENST00000474568 IGLV5-52A0A0A0MRZ9 124 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 IGHV1-24A0A0C4DH33 117 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 HIGD1CA8MV81 97 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 KRTAP10-1P60331 282 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 RPL23P62829 140 aaKnown RBP10.62□□□□□ -0.71
ITGB1-210ENST00000474568 CLPSL2Q6UWE3 100 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 TSKUQ8WUA8 353 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 BORCS7Q96B45 105 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 RMI2Q96E14 147 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 RPL39LQ96EH5 51 aaKnown RBP10.62□□□□□ -0.71
ITGB1-210ENST00000474568 KRTAP17-1Q9BYP8 105 aa10.62□□□□□ -0.71
ITGB1-210ENST00000474568 CRPP02741 224 aa10.61□□□□□ -0.71
ITGB1-210ENST00000474568 FAM74A3Q4VXF1 159 aa10.61□□□□□ -0.71
ITGB1-210ENST00000474568 ISOC2Q96AB3 205 aa10.61□□□□□ -0.71
ITGB1-210ENST00000474568 V9GYV3 84 aa10.61□□□□□ -0.71
ITGB1-210ENST00000474568 GCSHP23434 173 aa10.6□□□□□ -0.71
ITGB1-210ENST00000474568 RBX1P62877 108 aa10.6□□□□□ -0.71
ITGB1-210ENST00000474568 IQCJQ1A5X6 159 aa10.6□□□□□ -0.71
ITGB1-210ENST00000474568 ENHOQ6UWT2 76 aa10.6□□□□□ -0.71
ITGB1-210ENST00000474568 NAT8Q9UHE5 227 aa10.6□□□□□ -0.71
ITGB1-210ENST00000474568 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.59□□□□□ -0.71
ITGB1-210ENST00000474568 A0A1B0GUT8 65 aa10.59□□□□□ -0.71
ITGB1-210ENST00000474568 PKIAP61925 76 aa10.59□□□□□ -0.71
ITGB1-210ENST00000474568 KRTAP4-5Q9BYR2 181 aa10.59□□□□□ -0.71
ITGB1-210ENST00000474568 ABCA13Q86UQ4 5058 aa10.59□□□□□ -0.71
ITGB1-210ENST00000474568 Q0VG73 95 aa10.58□□□□□ -0.72
ITGB1-210ENST00000474568 COTL1Q14019 142 aa10.58□□□□□ -0.72
ITGB1-210ENST00000474568 TMEM243Q9BU79 118 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms