RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 SLC7A5P1Q8MH63 180 aa8.72□□□□□ -1.01
SHROOM3-204ENST00000473602 MUC21A0A0G2JKD1 596 aa8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 MUC21A0A140T8X8 626 aa8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 GZMBP10144 247 aa8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 CDPF1Q6NVV7 123 aa8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 NUDT10Q8NFP7 164 aa8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 NUDT11Q96G61 164 aa8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 TPPP3Q9BW30 176 aa8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 KIF25-AS1Q9Y6Z4 181 aa8.71□□□□□ -1.02
SHROOM3-204ENST00000473602 FLG2Q5D862 2391 aaPredicted RBP8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 F5H697 171 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 IGHV3-30P01768 117 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 IGHV3-33P01772 117 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 TRGC1P0CF51 173 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 IGHV3-30-5P0DP03 117 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 CTRLP40313 264 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 TOR2AQ5JU69 321 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 WDR73Q6P4I2 378 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 NEXN-AS1Q8NBZ9 246 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 OCC1Q8TAD7 63 aa8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 RPP21Q9H633 154 aaKnown RBP8.7□□□□□ -1.02
SHROOM3-204ENST00000473602 A0A087WTM6 91 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 H7C1H1 209 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 K7EN84 100 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 PSCAO43653 123 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 FUSP35637 526 aaKnown RBP eCLIP8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 XGP55808 180 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 SSTP61278 116 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 CHCHD7Q9BUK0 85 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 CNFNQ9BYD5 112 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 EIF5A2Q9GZV4 153 aaKnown RBP8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 PGPEP1Q9NXJ5 209 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 URGCP-MRPS24S4R325 110 aa8.69□□□□□ -1.02
SHROOM3-204ENST00000473602 TRAV8-3A0A0A6YYJ7 113 aa8.68□□□□□ -1.02
SHROOM3-204ENST00000473602 TMEM97Q5BJF2 176 aa8.68□□□□□ -1.02
SHROOM3-204ENST00000473602 Q5VSD8 79 aa8.68□□□□□ -1.02
SHROOM3-204ENST00000473602 LYZL1Q6UWQ5 148 aa8.68□□□□□ -1.02
SHROOM3-204ENST00000473602 FAM231DQ6ZW35 169 aa8.68□□□□□ -1.02
SHROOM3-204ENST00000473602 NIT1Q86X76 327 aa8.68□□□□□ -1.02
SHROOM3-204ENST00000473602 RNASE7Q9H1E1 156 aaKnown RBP8.68□□□□□ -1.02
SHROOM3-204ENST00000473602 TRBV6-8A0A0A6YYG3 113 aa8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 KCNIP4Q6PIL6 250 aa8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 DAZ4Q86SG3 579 aaKnown RBP8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 DNAJC30Q96LL9 226 aa8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 SMIM7Q9BQ49 75 aa8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 TM2D2Q9BX73 214 aa8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 DPH3P1Q9H4G8 78 aa8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 Q9HAA7 133 aa8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 DAZ3Q9NR90 486 aaKnown RBP8.67□□□□□ -1.02
SHROOM3-204ENST00000473602 A0A087WX48 190 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 M0QY20 66 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 MGPP08493 103 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 NTF3P20783 257 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 CEBPGP53567 150 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 PKIAP61925 76 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 ELOBQ15370 118 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 CT83Q5H943 113 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 Q8N3U1 123 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 FRZBQ92765 325 aa8.66□□□□□ -1.02
SHROOM3-204ENST00000473602 A8MWL6 223 aa8.65□□□□□ -1.02
SHROOM3-204ENST00000473602 GATCO43716 136 aaKnown RBP8.65□□□□□ -1.02
SHROOM3-204ENST00000473602 COX11Q9Y6N1 276 aa8.65□□□□□ -1.02
SHROOM3-204ENST00000473602 LRCOL1A6NCL2 159 aa8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 SRP19P09132 144 aaKnown RBP8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 TWIST1Q15672 202 aa8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 SUMO4Q6EEV6 95 aa8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 RASL11AQ6T310 242 aa8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 NTN5Q8WTR8 489 aaPredicted RBP8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 RMI2Q96E14 147 aa8.64□□□□□ -1.03
SHROOM3-204ENST00000473602 SMR3BP02814 79 aaPredicted RBP8.63□□□□□ -1.03
SHROOM3-204ENST00000473602 FAM74A3Q4VXF1 159 aa8.63□□□□□ -1.03
SHROOM3-204ENST00000473602 SMIM15Q7Z3B0 74 aa8.63□□□□□ -1.03
SHROOM3-204ENST00000473602 GTSF1Q8WW33 167 aa8.63□□□□□ -1.03
SHROOM3-204ENST00000473602 TRBV25-1A0A075B6N4 114 aa8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 FOXA3P55318 350 aaPredicted RBP8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 KRTAP10-1P60331 282 aa8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 Q0VG73 95 aa8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 LCE2AQ5TA79 106 aaPredicted RBP8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 GFRA4Q9GZZ7 299 aa8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 SMDT1Q9H4I9 107 aa8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 NIT2Q9NQR4 276 aa8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 OSTCQ9NRP0 149 aa8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 KLK12Q9UKR0 248 aa8.62□□□□□ -1.03
SHROOM3-204ENST00000473602 FAM231BA6NCW3 169 aa8.61□□□□□ -1.03
SHROOM3-204ENST00000473602 TMEM262E9PQX1 116 aa8.61□□□□□ -1.03
SHROOM3-204ENST00000473602 IQCJQ1A5X6 159 aa8.61□□□□□ -1.03
SHROOM3-204ENST00000473602 ATRAIDQ6UW56 229 aa8.61□□□□□ -1.03
SHROOM3-204ENST00000473602 NTM-AS1Q6ZSK4 140 aa8.61□□□□□ -1.03
SHROOM3-204ENST00000473602 Q8N814 137 aa8.61□□□□□ -1.03
SHROOM3-204ENST00000473602 BORCS7Q96B45 105 aa8.61□□□□□ -1.03
SHROOM3-204ENST00000473602 CHCHD5Q9BSY4 110 aa8.61□□□□□ -1.03
SHROOM3-204ENST00000473602 IGHV1-24A0A0C4DH33 117 aa8.6□□□□□ -1.03
SHROOM3-204ENST00000473602 PEA15Q15121 130 aa8.6□□□□□ -1.03
SHROOM3-204ENST00000473602 MPV17L2Q567V2 206 aa8.6□□□□□ -1.03
SHROOM3-204ENST00000473602 UQCC3Q6UW78 93 aa8.6□□□□□ -1.03
SHROOM3-204ENST00000473602 C15orf54Q8N8G6 183 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms