RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PPP1R1CQ8WVI7 109 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 HIST1H2BAQ96A08 127 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 UBE2WQ96B02 151 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 ZC2HC1AQ96GY0 325 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 C9orf85Q96MD7 179 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 SEC22CQ9BRL7 303 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 PSMG3Q9BT73 122 aaPredicted RBP2.29□□□□□ -2.04
XRN1-209ENST00000472625 PARLQ9H300 379 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 DPH3P1Q9H4G8 78 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 HSPB11Q9Y547 144 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 PHLDA3Q9Y5J5 127 aa2.29□□□□□ -2.04
XRN1-209ENST00000472625 PKHD1L1Q86WI1 4243 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 TRBV7-3A0A075B6L6 115 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 LOC100131303A0A0U1RQF7 123 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 A0A1W2PRE2 83 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 RNF222A6NCQ9 220 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 FABP5P3A8MUU1 101 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 B4DEV8 164 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 GNRH2O43555 120 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 MPC2O95563 127 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 STAG3L2P0CL84 134 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 STAG3L3P0CL85 134 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 ARL14EPLP0DKL9 152 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 GZMBP10144 247 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 TPT1P13693 172 aaKnown RBP2.28□□□□□ -2.04
XRN1-209ENST00000472625 RPL12P30050 165 aaKnown RBP2.28□□□□□ -2.04
XRN1-209ENST00000472625 UBE2G1P62253 170 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 GAGE5Q13069 117 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 FAM162BQ5T6X4 162 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 FAM74A4Q5TZK3 123 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 Q6ZRU5 148 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 DAZ4Q86SG3 579 aaKnown RBP2.28□□□□□ -2.04
XRN1-209ENST00000472625 CIRBP-AS1Q8TBR5 109 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 RNF185Q96GF1 192 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 LINC00479Q96M42 142 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 LITAFQ99732 161 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 DAZ3Q9NR90 486 aaKnown RBP2.28□□□□□ -2.04
XRN1-209ENST00000472625 PSG8Q9UQ74 426 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 ZFP30Q9Y2G7 519 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 RNF213Q63HN8 5207 aa2.28□□□□□ -2.04
XRN1-209ENST00000472625 TNXBP22105 4242 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 LRP2P98164 4655 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 TRBV25-1A0A075B6N4 114 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 A0A087X002 238 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 TRBV6-8A0A0A6YYG3 113 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 BORCS7-ASMTA0A0B4J1R7 106 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 IGHV3-73A0A0B4J1V6 119 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 TRAV8-4A0A0B4J246 113 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 TMEM262E9PQX1 116 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 H3BVH4 76 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 H7C1H1 209 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 LECT2O14960 151 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 HMGB3O15347 200 aaKnown RBP2.27□□□□□ -2.05
XRN1-209ENST00000472625 PLA2G10O15496 165 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 IFNA7P01567 189 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 P01737 135 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 HLA-DQA1P01909 254 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 ANGP03950 147 aaKnown RBP2.27□□□□□ -2.05
XRN1-209ENST00000472625 SMIM17P0DL12 118 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 RNASE3P12724 160 aaKnown RBP2.27□□□□□ -2.05
XRN1-209ENST00000472625 GCHFRP30047 84 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 RAB4BP61018 213 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 CNBPP62633 177 aaKnown RBP2.27□□□□□ -2.05
XRN1-209ENST00000472625 DNLZQ5SXM8 178 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 Q6ZQT7 251 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 PRNTQ86SH4 94 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 OR10G8Q8NGN5 311 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 SUN5Q8TC36 379 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 C7orf33Q8WU49 177 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 BAALCQ8WXS3 180 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 FMC1Q96HJ9 113 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 SDHCQ99643 169 aaPredicted RBP2.27□□□□□ -2.05
XRN1-209ENST00000472625 ACTR3CQ9C0K3 210 aaPredicted RBP2.27□□□□□ -2.05
XRN1-209ENST00000472625 GFRA4Q9GZZ7 299 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 KLK12Q9UKR0 248 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 EPDR1Q9UM22 224 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 TNFSF18Q9UNG2 199 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 ARL2-SNX15V9GYD0 113 aa2.27□□□□□ -2.05
XRN1-209ENST00000472625 IGHV3-64A0A075B6Q5 118 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 TRAV34A0A0B4J273 112 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 CTXND1A0A1B0GTU2 59 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 PGPEP1LA6NFU8 196 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 INMT-MINDY4F8WBC2 141 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 M0R381 172 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 PEX7O00628 323 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 PTTG1O95997 202 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 TSHBP01222 138 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 S100A9P06702 114 aaKnown RBP2.26□□□□□ -2.05
XRN1-209ENST00000472625 CXCL1P09341 107 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 RAB2AP61019 212 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 UBE2D3P61077 147 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 UBE2D2P62837 147 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 GNG5P63218 68 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 WFDC2Q14508 124 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 ZNF56Q15929 161 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 LCE3CQ5T5A8 94 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 UFSP1Q6NVU6 142 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 CFAP161Q6P656 301 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 DPPA3Q6W0C5 159 aa2.26□□□□□ -2.05
XRN1-209ENST00000472625 COX8CQ7Z4L0 72 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms