RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
LINC00888-202ENST00000471496 GTSF1LQ9H1H1 148 aa8.4□□□□□ -1.06
LINC00888-202ENST00000471496 SMDT1Q9H4I9 107 aa8.4□□□□□ -1.06
LINC00888-202ENST00000471496 TRBV10-1A0A0K0K1A3 114 aa8.39□□□□□ -1.07
LINC00888-202ENST00000471496 PRSS29PA6NIE9 313 aa8.39□□□□□ -1.07
LINC00888-202ENST00000471496 GATCO43716 136 aaKnown RBP8.39□□□□□ -1.07
LINC00888-202ENST00000471496 NTF3P20783 257 aa8.39□□□□□ -1.07
LINC00888-202ENST00000471496 PEA15Q15121 130 aa8.39□□□□□ -1.07
LINC00888-202ENST00000471496 LELP1Q5T871 98 aa8.39□□□□□ -1.07
LINC00888-202ENST00000471496 WDR73Q6P4I2 378 aa8.39□□□□□ -1.07
LINC00888-202ENST00000471496 OR10G8Q8NGN5 311 aa8.39□□□□□ -1.07
LINC00888-202ENST00000471496 KRTAP4-2Q9BYR5 136 aa8.39□□□□□ -1.07
LINC00888-202ENST00000471496 EVI2AP22794 236 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 ERVFC1-1P60608 527 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 RPL23P62829 140 aaKnown RBP8.38□□□□□ -1.07
LINC00888-202ENST00000471496 ZNF56Q15929 161 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 FAM74A3Q4VXF1 159 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 CT83Q5H943 113 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
LINC00888-202ENST00000471496 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 OSTCQ9NRP0 149 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 TRBV7-3A0A075B6L6 115 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 FOXA3P55318 350 aaPredicted RBP8.38□□□□□ -1.07
LINC00888-202ENST00000471496 UBE2D3P61077 147 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 UBE2D2P62837 147 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 TMEM241Q24JQ0 296 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 SOHLH1Q5JUK2 328 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 ISOC2Q96AB3 205 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 TNFRSF18Q9Y5U5 241 aa8.38□□□□□ -1.07
LINC00888-202ENST00000471496 PKHD1P08F94 4074 aa8.37□□□□□ -1.07
LINC00888-202ENST00000471496 IGHV3-38A0A0C4DH36 116 aa8.37□□□□□ -1.07
LINC00888-202ENST00000471496 A8MWL6 223 aa8.37□□□□□ -1.07
LINC00888-202ENST00000471496 BTF3P20290 206 aaKnown RBP8.37□□□□□ -1.07
LINC00888-202ENST00000471496 LCE5AQ5TCM9 118 aa8.37□□□□□ -1.07
LINC00888-202ENST00000471496 V9GYV3 84 aa8.37□□□□□ -1.07
LINC00888-202ENST00000471496 DNAH11Q96DT5 4516 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 F5H697 171 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 M0QY20 66 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 SMIM17P0DL12 118 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 RPL36AP83881 106 aaKnown RBP8.36□□□□□ -1.07
LINC00888-202ENST00000471496 LINC01556Q5JQF7 62 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 OR10J3Q5JRS4 329 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 CLLU1Q5K131 121 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 RPL36ALQ969Q0 106 aaKnown RBP8.36□□□□□ -1.07
LINC00888-202ENST00000471496 KRTAP4-11Q9BYQ6 195 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 NAT8Q9UHE5 227 aa8.36□□□□□ -1.07
LINC00888-202ENST00000471496 TRAV8-6A0A0B4J262 113 aa8.35□□□□□ -1.07
LINC00888-202ENST00000471496 K7EP13 123 aa8.35□□□□□ -1.07
LINC00888-202ENST00000471496 TRGC1P0CF51 173 aa8.35□□□□□ -1.07
LINC00888-202ENST00000471496 SUMO4Q6EEV6 95 aa8.35□□□□□ -1.07
LINC00888-202ENST00000471496 TSKUQ8WUA8 353 aa8.35□□□□□ -1.07
LINC00888-202ENST00000471496 PGLYRP4Q96LB8 373 aa8.35□□□□□ -1.07
LINC00888-202ENST00000471496 DPH3P1Q9H4G8 78 aa8.35□□□□□ -1.07
LINC00888-202ENST00000471496 A0A087WWC5 75 aa8.34□□□□□ -1.07
LINC00888-202ENST00000471496 MGPP08493 103 aa8.34□□□□□ -1.07
LINC00888-202ENST00000471496 RAB14P61106 215 aa8.34□□□□□ -1.07
LINC00888-202ENST00000471496 TWIST1Q15672 202 aa8.34□□□□□ -1.07
LINC00888-202ENST00000471496 ADIRFQ15847 76 aa8.34□□□□□ -1.07
LINC00888-202ENST00000471496 GFRA4Q9GZZ7 299 aa8.34□□□□□ -1.07
LINC00888-202ENST00000471496 TRAV9-2A0A087WT02 112 aa8.33□□□□□ -1.08
LINC00888-202ENST00000471496 FAM231BA6NCW3 169 aa8.33□□□□□ -1.08
LINC00888-202ENST00000471496 HIGD1CA8MV81 97 aa8.33□□□□□ -1.08
LINC00888-202ENST00000471496 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 IGHV3-33P01772 117 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 IGHV3-30-3P0DP02 117 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 NTM-AS1Q6ZSK4 140 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 C15orf54Q8N8G6 183 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 IBA57-AS1B1ANH7 110 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 RASL11AQ6T310 242 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 NIT1Q86X76 327 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 C10orf126Q8N4M7 172 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 GATD1Q8NB37 220 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 KRTAP9-3Q9BYQ3 159 aa8.32□□□□□ -1.08
LINC00888-202ENST00000471496 TRBV6-8A0A0A6YYG3 113 aa8.31□□□□□ -1.08
LINC00888-202ENST00000471496 A0A1B0GUT8 65 aa8.31□□□□□ -1.08
LINC00888-202ENST00000471496 SMIM27A0A1W2PRY6 76 aa8.31□□□□□ -1.08
LINC00888-202ENST00000471496 H7C1H1 209 aa8.31□□□□□ -1.08
LINC00888-202ENST00000471496 NUP35Q8NFH5 326 aa8.31□□□□□ -1.08
LINC00888-202ENST00000471496 DNAJC30Q96LL9 226 aa8.31□□□□□ -1.08
LINC00888-202ENST00000471496 TRAV26-2A0A0B4J265 109 aa8.3□□□□□ -1.08
LINC00888-202ENST00000471496 PLA2G1BP04054 148 aaKnown RBP8.3□□□□□ -1.08
LINC00888-202ENST00000471496 DAZ4Q86SG3 579 aaKnown RBP8.3□□□□□ -1.08
LINC00888-202ENST00000471496 NIT2Q9NQR4 276 aa8.3□□□□□ -1.08
LINC00888-202ENST00000471496 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
LINC00888-202ENST00000471496 DYNC1H1Q14204 4646 aaKnown RBP8.3□□□□□ -1.08
LINC00888-202ENST00000471496 NFE4Q86UQ8 179 aa8.29□□□□□ -1.08
LINC00888-202ENST00000471496 GAS8-AS1O95177 125 aa8.28□□□□□ -1.08
LINC00888-202ENST00000471496 LAGE3Q14657 143 aa8.28□□□□□ -1.08
LINC00888-202ENST00000471496 RNF185Q96GF1 192 aa8.28□□□□□ -1.08
LINC00888-202ENST00000471496 TMEM191AQ9H0A3 160 aa8.28□□□□□ -1.08
LINC00888-202ENST00000471496 NAT8BQ9UHF3 227 aa8.28□□□□□ -1.08
LINC00888-202ENST00000471496 PLA2G2DQ9UNK4 145 aa8.28□□□□□ -1.08
LINC00888-202ENST00000471496 FRZBQ92765 325 aa8.27□□□□□ -1.09
LINC00888-202ENST00000471496 BORCS7Q96B45 105 aa8.27□□□□□ -1.09
LINC00888-202ENST00000471496 RPL39LQ96EH5 51 aaKnown RBP8.27□□□□□ -1.09
LINC00888-202ENST00000471496 KIAA1109Q2LD37 5005 aa8.27□□□□□ -1.09
LINC00888-202ENST00000471496 ADCYAP1P18509 176 aa8.26□□□□□ -1.09
LINC00888-202ENST00000471496 RAB4AP20338 218 aa8.26□□□□□ -1.09
LINC00888-202ENST00000471496 KRTAP10-2P60368 255 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms