RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 MAST4O15021 2626 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 GVQW2A0A096LPI5 108 aaPredicted RBP0.27□□□□□ -2.37
HERC3-208ENST00000470815 TRGV1A0A0A0MS02 117 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 TRBV7-1A0A0A6YYK4 115 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 FAM92AA1XBS5 289 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 HCG22E2RYF7 251 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 DLEU1O43261 78 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 EDDM3BP56851 147 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 INSL4Q14641 139 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 Q8N8P6 123 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 SMIM11BQ8TCY0 68 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 SNRNP25Q9BV90 132 aaKnown RBP0.27□□□□□ -2.37
HERC3-208ENST00000470815 RERGLQ9H628 205 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 SCN3BQ9NY72 215 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 LINC00312Q9Y6C7 94 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 SERP1Q9Y6X1 66 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 TNCP24821 2201 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 MED13LQ71F56 2210 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 GRIN2AQ12879 1464 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 JMJD1CQ15652 2540 aa0.27□□□□□ -2.37
HERC3-208ENST00000470815 MACF1Q9UPN3 7388 aaKnown RBP0.27□□□□□ -2.37
HERC3-208ENST00000470815 APODP05090 189 aa0.26□□□□□ -2.37
HERC3-208ENST00000470815 AKAIN1P0CW23 69 aa0.26□□□□□ -2.37
HERC3-208ENST00000470815 V9GYV3 84 aa0.26□□□□□ -2.37
HERC3-208ENST00000470815 MBD5Q9P267 1494 aa0.26□□□□□ -2.37
HERC3-208ENST00000470815 NRXN2Q9P2S2 1712 aa0.26□□□□□ -2.37
HERC3-208ENST00000470815 LAMB1P07942 1786 aa0.26□□□□□ -2.37
HERC3-208ENST00000470815 PLXNA1Q9UIW2 1896 aa0.26□□□□□ -2.37
HERC3-208ENST00000470815 AKAP11Q9UKA4 1901 aa0.26□□□□□ -2.37
HERC3-208ENST00000470815 LAMC3Q9Y6N6 1575 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 ZNF518AQ6AHZ1 1483 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 DAPK1P53355 1430 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 MYOM3Q5VTT5 1437 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 TRBV10-3A0A0K0K1G6 114 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 OOSP1A8MZH6 123 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 MIF4GDA9UHW6 222 aaKnown RBP0.25□□□□□ -2.37
HERC3-208ENST00000470815 SNAPC5O75971 98 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 IFNA17P01571 189 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 ACYP2P14621 99 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 CCL8P80075 99 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 CATR1Q13166 79 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 Q56UQ5 140 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 C10orf128Q5T292 105 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 Q6AWC8 147 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 C1orf54Q8WWF1 131 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 PP6455Q8WZ26 134 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 TSLPQ969D9 159 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 WFDC6Q9BQY6 131 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 NAA60Q9H7X0 242 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 LINC00474Q9P2X8 69 aa0.25□□□□□ -2.37
HERC3-208ENST00000470815 PHIPQ8WWQ0 1821 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 SSC5DA1L4H1 1573 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 ZMYM4Q5VZL5 1548 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 KIAA0100Q14667 2235 aaKnown RBP0.24□□□□□ -2.37
HERC3-208ENST00000470815 TRAV13-2A0A0B4J235 113 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 APOC4-APOC2K7ER74 178 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 SIX6O95475 246 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 PPP1R17O96001 155 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 FGF7P21781 194 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 BTG2P78543 158 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 ZNF818PQ6ZRF7 136 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 Q6ZRX8 168 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 COPS9Q8WXC6 57 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 C2orf88Q9BSF0 95 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
HERC3-208ENST00000470815 FOCADQ5VW36 1801 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 PHLPP1O60346 1717 aa0.24□□□□□ -2.37
HERC3-208ENST00000470815 F5P12259 2224 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 DOCK11Q5JSL3 2073 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 CFTRP13569 1480 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 IFT140Q96RY7 1462 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 CASKIN1Q8WXD9 1431 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 TRAV1-2A0A0B4J238 106 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 F6UZH7 168 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 CORTO00230 105 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 APOC2P02655 101 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 S100A1P23297 94 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 MRPL54Q6P161 138 aaKnown RBP0.23□□□□□ -2.37
HERC3-208ENST00000470815 TTC9CQ8N5M4 171 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 GNG8Q9UK08 70 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 TTC28Q96AY4 2481 aa0.23□□□□□ -2.37
HERC3-208ENST00000470815 ARFGEF1Q9Y6D6 1849 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 CACNA1HO95180 2353 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 TMEM14DPA8MWL7 114 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 G3V318 75 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 NMBP08949 121 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 C9orf153Q5TBE3 101 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 C12orf73Q69YU5 71 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 PPP3R2Q96LZ3 170 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 AQP10Q96PS8 301 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 SPANXDQ9BXN6 97 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 UNC13BO14795 1591 aa0.22□□□□□ -2.37
HERC3-208ENST00000470815 FAT4Q6V0I7 4981 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 M0R135 149 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 IFNGP01579 166 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 GCHFRP30047 84 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 CCL18P55774 89 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 TPPP2P59282 170 aa0.21□□□□□ -2.38
HERC3-208ENST00000470815 SPAG11BQ08648 103 aa0.21□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms