RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 TRGC1P0CF51 173 aa9.48□□□□□ -0.89
TOP3B-215ENST00000470338 NIT1Q86X76 327 aa9.48□□□□□ -0.89
TOP3B-215ENST00000470338 GTSF1Q8WW33 167 aa9.48□□□□□ -0.89
TOP3B-215ENST00000470338 RYR1P21817 5038 aa9.47□□□□□ -0.89
TOP3B-215ENST00000470338 A0A087WTM6 91 aa9.47□□□□□ -0.89
TOP3B-215ENST00000470338 TRBV6-8A0A0A6YYG3 113 aa9.47□□□□□ -0.89
TOP3B-215ENST00000470338 ZNF727A8MUV8 499 aa9.47□□□□□ -0.89
TOP3B-215ENST00000470338 EREGO14944 169 aa9.47□□□□□ -0.89
TOP3B-215ENST00000470338 DAZ4Q86SG3 579 aaKnown RBP9.47□□□□□ -0.89
TOP3B-215ENST00000470338 LINC01551Q86U37 167 aa9.47□□□□□ -0.89
TOP3B-215ENST00000470338 DPH3P1Q9H4G8 78 aa9.47□□□□□ -0.89
TOP3B-215ENST00000470338 DAZ3Q9NR90 486 aaKnown RBP9.47□□□□□ -0.89
TOP3B-215ENST00000470338 A8MWL6 223 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 H7C1H1 209 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 MGPP08493 103 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 FOXA3P55318 350 aaPredicted RBP9.46□□□□□ -0.9
TOP3B-215ENST00000470338 CT83Q5H943 113 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 SUMO4Q6EEV6 95 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 DNAJC30Q96LL9 226 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 Q9HAA7 133 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 PGPEP1Q9NXJ5 209 aa9.46□□□□□ -0.9
TOP3B-215ENST00000470338 LRCOL1A6NCL2 159 aa9.45□□□□□ -0.9
TOP3B-215ENST00000470338 TWIST1Q15672 202 aa9.45□□□□□ -0.9
TOP3B-215ENST00000470338 FAM74A3Q4VXF1 159 aa9.45□□□□□ -0.9
TOP3B-215ENST00000470338 TMEM97Q5BJF2 176 aa9.45□□□□□ -0.9
TOP3B-215ENST00000470338 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.45□□□□□ -0.9
TOP3B-215ENST00000470338 URGCP-MRPS24S4R325 110 aa9.45□□□□□ -0.9
TOP3B-215ENST00000470338 TRAV8-3A0A0A6YYJ7 113 aa9.44□□□□□ -0.9
TOP3B-215ENST00000470338 C9JQL5 133 aa9.44□□□□□ -0.9
TOP3B-215ENST00000470338 PSCAO43653 123 aa9.44□□□□□ -0.9
TOP3B-215ENST00000470338 NTM-AS1Q6ZSK4 140 aa9.44□□□□□ -0.9
TOP3B-215ENST00000470338 SMDT1Q9H4I9 107 aa9.44□□□□□ -0.9
TOP3B-215ENST00000470338 OSTCQ9NRP0 149 aa9.44□□□□□ -0.9
TOP3B-215ENST00000470338 A0A087WX48 190 aa9.43□□□□□ -0.9
TOP3B-215ENST00000470338 SRSF3P84103 164 aaKnown RBP9.43□□□□□ -0.9
TOP3B-215ENST00000470338 PEA15Q15121 130 aa9.43□□□□□ -0.9
TOP3B-215ENST00000470338 TMEM241Q24JQ0 296 aa9.43□□□□□ -0.9
TOP3B-215ENST00000470338 CDPF1Q6NVV7 123 aa9.43□□□□□ -0.9
TOP3B-215ENST00000470338 RASL11AQ6T310 242 aa9.43□□□□□ -0.9
TOP3B-215ENST00000470338 TM2D2Q9BX73 214 aa9.43□□□□□ -0.9
TOP3B-215ENST00000470338 NIT2Q9NQR4 276 aa9.43□□□□□ -0.9
TOP3B-215ENST00000470338 APOBP04114 4563 aaKnown RBP9.43□□□□□ -0.9
TOP3B-215ENST00000470338 HSPG2P98160 4391 aa9.42□□□□□ -0.9
TOP3B-215ENST00000470338 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
TOP3B-215ENST00000470338 CDK2AP2O75956 126 aa9.42□□□□□ -0.9
TOP3B-215ENST00000470338 ELOBQ15370 118 aa9.42□□□□□ -0.9
TOP3B-215ENST00000470338 TSKUQ8WUA8 353 aa9.42□□□□□ -0.9
TOP3B-215ENST00000470338 PGLYRP4Q96LB8 373 aa9.42□□□□□ -0.9
TOP3B-215ENST00000470338 GFRA4Q9GZZ7 299 aa9.42□□□□□ -0.9
TOP3B-215ENST00000470338 RAB14P61106 215 aa9.41□□□□□ -0.9
TOP3B-215ENST00000470338 RPL23P62829 140 aaKnown RBP9.41□□□□□ -0.9
TOP3B-215ENST00000470338 IFITM2Q01629 132 aa9.41□□□□□ -0.9
TOP3B-215ENST00000470338 KCNIP4Q6PIL6 250 aa9.41□□□□□ -0.9
TOP3B-215ENST00000470338 FRZBQ92765 325 aa9.41□□□□□ -0.9
TOP3B-215ENST00000470338 ISOC2Q96AB3 205 aa9.41□□□□□ -0.9
TOP3B-215ENST00000470338 KLK12Q9UKR0 248 aa9.41□□□□□ -0.9
TOP3B-215ENST00000470338 TMEM262E9PQX1 116 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 FUSP35637 526 aaKnown RBP eCLIP9.4□□□□□ -0.9
TOP3B-215ENST00000470338 PKIAP61925 76 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 IQCJQ1A5X6 159 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 SMIM15Q7Z3B0 74 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 C15orf54Q8N8G6 183 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 GATD1Q8NB37 220 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 CHCHD5Q9BSY4 110 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 NAT8Q9UHE5 227 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 COX11Q9Y6N1 276 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 V9GYV3 84 aa9.4□□□□□ -0.9
TOP3B-215ENST00000470338 TRBV25-1A0A075B6N4 114 aa9.39□□□□□ -0.91
TOP3B-215ENST00000470338 HIGD1CA8MV81 97 aa9.39□□□□□ -0.91
TOP3B-215ENST00000470338 MPV17L2Q567V2 206 aa9.39□□□□□ -0.91
TOP3B-215ENST00000470338 ATRAIDQ6UW56 229 aa9.39□□□□□ -0.91
TOP3B-215ENST00000470338 MAPKAPK5-AS1Q8N8E1 139 aa9.39□□□□□ -0.91
TOP3B-215ENST00000470338 RMI2Q96E14 147 aa9.39□□□□□ -0.91
TOP3B-215ENST00000470338 TRAV26-2A0A0B4J265 109 aa9.38□□□□□ -0.91
TOP3B-215ENST00000470338 IGHV1-24A0A0C4DH33 117 aa9.38□□□□□ -0.91
TOP3B-215ENST00000470338 A0A1B0GUT8 65 aa9.38□□□□□ -0.91
TOP3B-215ENST00000470338 Q0VG73 95 aa9.38□□□□□ -0.91
TOP3B-215ENST00000470338 Q8N814 137 aa9.38□□□□□ -0.91
TOP3B-215ENST00000470338 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
TOP3B-215ENST00000470338 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
TOP3B-215ENST00000470338 ADIRFQ15847 76 aa9.37□□□□□ -0.91
TOP3B-215ENST00000470338 ENHOQ6UWT2 76 aa9.37□□□□□ -0.91
TOP3B-215ENST00000470338 NTN5Q8WTR8 489 aaPredicted RBP9.37□□□□□ -0.91
TOP3B-215ENST00000470338 ANGP03950 147 aaKnown RBP9.36□□□□□ -0.91
TOP3B-215ENST00000470338 WFDC2Q14508 124 aa9.36□□□□□ -0.91
TOP3B-215ENST00000470338 CLLU1Q5K131 121 aa9.36□□□□□ -0.91
TOP3B-215ENST00000470338 Q8N976 141 aa9.36□□□□□ -0.91
TOP3B-215ENST00000470338 NUP35Q8NFH5 326 aa9.36□□□□□ -0.91
TOP3B-215ENST00000470338 TMEM191AQ9H0A3 160 aa9.36□□□□□ -0.91
TOP3B-215ENST00000470338 IGKV2D-24A0A075B6R9 120 aa9.35□□□□□ -0.91
TOP3B-215ENST00000470338 KRTAP10-1P60331 282 aa9.35□□□□□ -0.91
TOP3B-215ENST00000470338 RBX1P62877 108 aa9.35□□□□□ -0.91
TOP3B-215ENST00000470338 GAGE6Q13070 117 aa9.35□□□□□ -0.91
TOP3B-215ENST00000470338 RPL39LQ96EH5 51 aaKnown RBP9.35□□□□□ -0.91
TOP3B-215ENST00000470338 KRTAP17-1Q9BYP8 105 aa9.35□□□□□ -0.91
TOP3B-215ENST00000470338 PRR34Q9NV39 138 aa9.35□□□□□ -0.91
TOP3B-215ENST00000470338 A0A1B0GUV1 79 aa9.34□□□□□ -0.91
TOP3B-215ENST00000470338 GCSHP23434 173 aa9.34□□□□□ -0.91
TOP3B-215ENST00000470338 COTL1Q14019 142 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms