RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 CCDC58Q4VC31 144 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 COPS9Q8WXC6 57 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 MUC2Q02817 5179 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 LAMC3Q9Y6N6 1575 aa0.36□□□□□ -2.35
SOX2-OT-204ENST00000469278 ABCA12Q86UK0 2595 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 AKAP11Q9UKA4 1901 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 IGF2RP11717 2491 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 TRGV1A0A0A0MS02 117 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 TMEM14DPA8MWL7 114 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 FAM25AB3EWG3 89 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 FAM25CB3EWG5 89 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 FAM25GB3EWG6 89 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 APOC4-APOC2K7ER74 178 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 PITX3O75364 302 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 ARPC4P59998 168 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 FAM213BQ8TBF2 198 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 Q96NJ1 140 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 SEC11CQ9BY50 192 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 UBR4Q5T4S7 5183 aa0.35□□□□□ -2.35
SOX2-OT-204ENST00000469278 SPINK1P00995 79 aa0.34□□□□□ -2.36
SOX2-OT-204ENST00000469278 UBE2D1P51668 147 aa0.34□□□□□ -2.36
SOX2-OT-204ENST00000469278 Q6ZRX8 168 aa0.34□□□□□ -2.36
SOX2-OT-204ENST00000469278 TSC22D3Q99576 134 aa0.34□□□□□ -2.36
SOX2-OT-204ENST00000469278 PDCD10Q9BUL8 212 aa0.34□□□□□ -2.36
SOX2-OT-204ENST00000469278 MUC22E2RYF6 1773 aaPredicted RBP0.34□□□□□ -2.36
SOX2-OT-204ENST00000469278 SPEF2Q9C093 1822 aa0.34□□□□□ -2.36
SOX2-OT-204ENST00000469278 ARFGEF1Q9Y6D6 1849 aa0.34□□□□□ -2.36
SOX2-OT-204ENST00000469278 IBTKQ9P2D0 1353 aaPredicted RBP0.33□□□□□ -2.36
SOX2-OT-204ENST00000469278 TRBV10-3A0A0K0K1G6 114 aa0.33□□□□□ -2.36
SOX2-OT-204ENST00000469278 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
SOX2-OT-204ENST00000469278 INSL4Q14641 139 aa0.33□□□□□ -2.36
SOX2-OT-204ENST00000469278 ZNF818PQ6ZRF7 136 aa0.33□□□□□ -2.36
SOX2-OT-204ENST00000469278 FAM107BQ9H098 131 aa0.33□□□□□ -2.36
SOX2-OT-204ENST00000469278 MYH9P35579 1960 aaKnown RBP0.33□□□□□ -2.36
SOX2-OT-204ENST00000469278 F8P00451 2351 aa0.33□□□□□ -2.36
SOX2-OT-204ENST00000469278 ADGRB1O14514 1584 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 LAMB1P07942 1786 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 ZFYVE26Q68DK2 2539 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 MAST4O15021 2626 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 S100A12P80511 92 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 Q5BKY6 102 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 UBE2DNLQ8IWF7 75 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 SDF2Q99470 211 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 UNC13BO14795 1591 aa0.32□□□□□ -2.36
SOX2-OT-204ENST00000469278 TRAV1-2A0A0B4J238 106 aa0.31□□□□□ -2.36
SOX2-OT-204ENST00000469278 HIST1H1DP16402 221 aaKnown RBP0.31□□□□□ -2.36
SOX2-OT-204ENST00000469278 ARL11Q969Q4 196 aa0.31□□□□□ -2.36
SOX2-OT-204ENST00000469278 DPH3Q96FX2 82 aa0.31□□□□□ -2.36
SOX2-OT-204ENST00000469278 LINC00312Q9Y6C7 94 aa0.31□□□□□ -2.36
SOX2-OT-204ENST00000469278 FAT4Q6V0I7 4981 aa0.3□□□□□ -2.36
SOX2-OT-204ENST00000469278 SELENOWP63302 87 aa0.3□□□□□ -2.36
SOX2-OT-204ENST00000469278 CCL8P80075 99 aa0.3□□□□□ -2.36
SOX2-OT-204ENST00000469278 BAGE3Q86Y29 109 aa0.3□□□□□ -2.36
SOX2-OT-204ENST00000469278 AQP10Q96PS8 301 aa0.3□□□□□ -2.36
SOX2-OT-204ENST00000469278 WFDC6Q9BQY6 131 aa0.3□□□□□ -2.36
SOX2-OT-204ENST00000469278 PIEZO1Q92508 2521 aa0.3□□□□□ -2.36
SOX2-OT-204ENST00000469278 ZNF518AQ6AHZ1 1483 aa0.29□□□□□ -2.36
SOX2-OT-204ENST00000469278 POLQO75417 2590 aa0.29□□□□□ -2.36
SOX2-OT-204ENST00000469278 MYH8P13535 1937 aa0.29□□□□□ -2.36
SOX2-OT-204ENST00000469278 AHCTF1Q8WYP5 2266 aa0.29□□□□□ -2.36
SOX2-OT-204ENST00000469278 NPVFQ9HCQ7 196 aa0.29□□□□□ -2.36
SOX2-OT-204ENST00000469278 SSPOA2VEC9 5147 aa0.28□□□□□ -2.36
SOX2-OT-204ENST00000469278 SSC5DA1L4H1 1573 aa0.28□□□□□ -2.36
SOX2-OT-204ENST00000469278 SYNE1Q8NF91 8797 aaKnown RBP0.28□□□□□ -2.36
SOX2-OT-204ENST00000469278 MYOM3Q5VTT5 1437 aa0.28□□□□□ -2.37
SOX2-OT-204ENST00000469278 GRIN2AQ12879 1464 aa0.28□□□□□ -2.37
SOX2-OT-204ENST00000469278 NWD2Q9ULI1 1742 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 TRAV13-2A0A0B4J235 113 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 PIN1P1O15428 100 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 GNG7O60262 68 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 PPP1R17O96001 155 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 HMGN1P05114 100 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 RBM3P98179 157 aaKnown RBP0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 C12orf73Q69YU5 71 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 LINC00470Q9BZP3 86 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 AGPAT4-IT1Q9H0P7 198 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 R4GMQ9 66 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 IFT140Q96RY7 1462 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 OTOGQ6ZRI0 2925 aa0.27□□□□□ -2.37
SOX2-OT-204ENST00000469278 CLPSL1A2RUU4 121 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 ZNF815PA8K554 130 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 HCG22E2RYF7 251 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 SIX6O95475 246 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 IFITM1P13164 125 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 MEIG1Q5JSS6 88 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 C10orf128Q5T292 105 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 CFAP126Q5VTH2 177 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 SSBP3-AS1Q7Z2R9 100 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 RERGLQ9H628 205 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 NAA60Q9H7X0 242 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 LRRC37A3O60309 1634 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 KIAA1109Q2LD37 5005 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 ASXL3Q9C0F0 2248 aa0.26□□□□□ -2.37
SOX2-OT-204ENST00000469278 IGSF10Q6WRI0 2623 aa0.25□□□□□ -2.37
SOX2-OT-204ENST00000469278 CACNA1AO00555 2505 aa0.25□□□□□ -2.37
SOX2-OT-204ENST00000469278 CACNA1CQ13936 2221 aa0.25□□□□□ -2.37
SOX2-OT-204ENST00000469278 MYH7P12883 1935 aa0.25□□□□□ -2.37
SOX2-OT-204ENST00000469278 GOLGA3Q08378 1498 aa0.25□□□□□ -2.37
SOX2-OT-204ENST00000469278 NAIPQ13075 1403 aa0.25□□□□□ -2.37
SOX2-OT-204ENST00000469278 CASKIN1Q8WXD9 1431 aa0.25□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms