RNA–Protein interactions for RNA: ENST00000468922.1

SYN3-210, Transcript of synapsin III, humanhuman

TSL 3

Gene SYN3, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-210ENST00000468922 XGP55808 180 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 RPS20P60866 119 aaKnown RBP5.7□□□□□ -1.5
SYN3-210ENST00000468922 GAGE1Q13065 139 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 GAGE4Q13068 117 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 GAGE5Q13069 117 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 GAGE13Q4V321 117 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 FAM74A4Q5TZK3 123 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 BIN3Q9NQY0 253 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 AP5S1Q9NUS5 200 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 MSRB1Q9NZV6 116 aa5.7□□□□□ -1.5
SYN3-210ENST00000468922 A0A087WWC5 75 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 RBFOX3A6NFN3 312 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 IBA57-AS1B1ANH7 110 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 TMEM250H0YL14 139 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 RAB4BP61018 213 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 OR10J3Q5JRS4 329 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 SPANXN1Q5VSR9 72 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 OR2D3Q8NGH3 330 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 OR10G8Q8NGN5 311 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 DAZAP1Q96EP5 407 aaKnown RBP5.69□□□□□ -1.5
SYN3-210ENST00000468922 KIF25-AS1Q9Y6Z4 181 aa5.69□□□□□ -1.5
SYN3-210ENST00000468922 TRBV7-3A0A075B6L6 115 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 MUC21A0A0G2JKD1 596 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 MUC21A0A140T8X8 626 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 F2Z2F3 143 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 FAM229AH3BQW9 127 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 P01737 135 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 GZMBP10144 247 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 UBE2D3P61077 147 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 UBE2D2P62837 147 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 RPL36AP83881 106 aaKnown RBP5.68□□□□□ -1.5
SYN3-210ENST00000468922 FER1L6-AS1Q8NA97 138 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 NUDT10Q8NFP7 164 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 OCC1Q8TAD7 63 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 RPL36ALQ969Q0 106 aaKnown RBP5.68□□□□□ -1.5
SYN3-210ENST00000468922 NUDT11Q96G61 164 aa5.68□□□□□ -1.5
SYN3-210ENST00000468922 FLG2Q5D862 2391 aaPredicted RBP5.67□□□□□ -1.5
SYN3-210ENST00000468922 A0A087WTM6 91 aa5.67□□□□□ -1.5
SYN3-210ENST00000468922 XKRY2A2RUG3 117 aa5.67□□□□□ -1.5
SYN3-210ENST00000468922 K7EN84 100 aa5.67□□□□□ -1.5
SYN3-210ENST00000468922 SMR3BP02814 79 aaPredicted RBP5.67□□□□□ -1.5
SYN3-210ENST00000468922 CACNG7P62955 275 aa5.67□□□□□ -1.5
SYN3-210ENST00000468922 LAGE3Q14657 143 aa5.67□□□□□ -1.5
SYN3-210ENST00000468922 NEXN-AS1Q8NBZ9 246 aa5.67□□□□□ -1.5
SYN3-210ENST00000468922 AP1S3Q96PC3 154 aa5.67□□□□□ -1.5
SYN3-210ENST00000468922 CNFNQ9BYD5 112 aa5.67□□□□□ -1.5
SYN3-210ENST00000468922 IGHV3-30P01768 117 aa5.66□□□□□ -1.5
SYN3-210ENST00000468922 IGHV3-33P01772 117 aa5.66□□□□□ -1.5
SYN3-210ENST00000468922 IGHV3-30-3P0DP02 117 aa5.66□□□□□ -1.5
SYN3-210ENST00000468922 IGHV3-30-5P0DP03 117 aa5.66□□□□□ -1.5
SYN3-210ENST00000468922 CTRLP40313 264 aa5.66□□□□□ -1.5
SYN3-210ENST00000468922 ERVFC1-1P60608 527 aa5.66□□□□□ -1.5
SYN3-210ENST00000468922 ZNF56Q15929 161 aa5.66□□□□□ -1.5
SYN3-210ENST00000468922 LYZL1Q6UWQ5 148 aa5.66□□□□□ -1.5
SYN3-210ENST00000468922 LRCOL1A6NCL2 159 aa5.65□□□□□ -1.5
SYN3-210ENST00000468922 SRP19P09132 144 aaKnown RBP5.65□□□□□ -1.5
SYN3-210ENST00000468922 SMIM17P0DL12 118 aa5.65□□□□□ -1.5
SYN3-210ENST00000468922 SSTP61278 116 aa5.65□□□□□ -1.5
SYN3-210ENST00000468922 FAM231DQ6ZW35 169 aa5.65□□□□□ -1.5
SYN3-210ENST00000468922 NIT1Q86X76 327 aa5.65□□□□□ -1.5
SYN3-210ENST00000468922 Q8N3U1 123 aa5.65□□□□□ -1.5
SYN3-210ENST00000468922 CHCHD7Q9BUK0 85 aa5.65□□□□□ -1.5
SYN3-210ENST00000468922 RNASE7Q9H1E1 156 aaKnown RBP5.65□□□□□ -1.5
SYN3-210ENST00000468922 RPP21Q9H633 154 aaKnown RBP5.65□□□□□ -1.5
SYN3-210ENST00000468922 TRBV6-8A0A0A6YYG3 113 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 KRTAP29-1A8MX34 341 aaPredicted RBP5.64□□□□□ -1.51
SYN3-210ENST00000468922 F5H697 171 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 M0QY20 66 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 TRGC1P0CF51 173 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 NTF3P20783 257 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 FOXA3P55318 350 aaPredicted RBP5.64□□□□□ -1.51
SYN3-210ENST00000468922 CDPF1Q6NVV7 123 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 DAZ4Q86SG3 579 aaKnown RBP5.64□□□□□ -1.51
SYN3-210ENST00000468922 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.64□□□□□ -1.51
SYN3-210ENST00000468922 DNAJC30Q96LL9 226 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 TPPP3Q9BW30 176 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 EIF5A2Q9GZV4 153 aaKnown RBP5.64□□□□□ -1.51
SYN3-210ENST00000468922 DAZ3Q9NR90 486 aaKnown RBP5.64□□□□□ -1.51
SYN3-210ENST00000468922 PLA2G2DQ9UNK4 145 aa5.64□□□□□ -1.51
SYN3-210ENST00000468922 TRAV8-3A0A0A6YYJ7 113 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 TMEM97Q5BJF2 176 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 SUMO4Q6EEV6 95 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 NTM-AS1Q6ZSK4 140 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 LINC01551Q86U37 167 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 GTSF1Q8WW33 167 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 SMIM7Q9BQ49 75 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 TM2D2Q9BX73 214 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 DPH3P1Q9H4G8 78 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 Q9HAA7 133 aa5.63□□□□□ -1.51
SYN3-210ENST00000468922 ZNF727A8MUV8 499 aa5.62□□□□□ -1.51
SYN3-210ENST00000468922 A8MWL6 223 aa5.62□□□□□ -1.51
SYN3-210ENST00000468922 H7C1H1 209 aa5.62□□□□□ -1.51
SYN3-210ENST00000468922 GATCO43716 136 aaKnown RBP5.62□□□□□ -1.51
SYN3-210ENST00000468922 MGPP08493 103 aa5.62□□□□□ -1.51
SYN3-210ENST00000468922 FUSP35637 526 aaKnown RBP eCLIP5.62□□□□□ -1.51
SYN3-210ENST00000468922 OSTCQ9NRP0 149 aa5.62□□□□□ -1.51
SYN3-210ENST00000468922 A0A087WX48 190 aa5.61□□□□□ -1.51
SYN3-210ENST00000468922 PSCAO43653 123 aa5.61□□□□□ -1.51
SYN3-210ENST00000468922 CEBPGP53567 150 aa5.61□□□□□ -1.51
SYN3-210ENST00000468922 ELOBQ15370 118 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms