RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 C12orf73Q69YU5 71 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 MRPL54Q6P161 138 aaKnown RBP0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 C4orf33Q8N1A6 199 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 DSCR8Q96T75 97 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 TMEM14BQ9NUH8 114 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 IFT140Q96RY7 1462 aa0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 MYH9P35579 1960 aaKnown RBP0.52□□□□□ -2.33
GTF3C3-209ENST00000466862 A0A087WTM6 91 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 TRAV13-2A0A0B4J235 113 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 PIGBOS1A0A0B4J2F0 54 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 OOSP1A8MZH6 123 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 HCG22E2RYF7 251 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 TNFP01375 233 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 PPP3R1P63098 170 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 SPINK9Q5DT21 86 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 C9orf153Q5TBE3 101 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 FAM74A4Q5TZK3 123 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 KTN1Q86UP2 1357 aaKnown RBP0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 COX7B2Q8TF08 81 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 CGREF1Q99674 301 aa0.51□□□□□ -2.33
GTF3C3-209ENST00000466862 PHIPQ8WWQ0 1821 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 ARAP2Q8WZ64 1704 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 RIMS1Q86UR5 1692 aaKnown RBP0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 PZPP20742 1482 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 CPSF1Q10570 1443 aaKnown RBP0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 RBAKDNA6NC62 111 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 S100PP25815 95 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 RPL37P61927 97 aaKnown RBP0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 CCL8P80075 99 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 MRPS10P82664 201 aaKnown RBP0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 ZNF818PQ6ZRF7 136 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 PPP3R2Q96LZ3 170 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 LINC00312Q9Y6C7 94 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 PLXNA1Q9UIW2 1896 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 NWD2Q9ULI1 1742 aa0.5□□□□□ -2.33
GTF3C3-209ENST00000466862 ROBO1Q9Y6N7 1651 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 ABCA4P78363 2273 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 A0A096LNT2 108 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 TRBV7-1A0A0A6YYK4 115 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 ATP6V1G2-DDX39BF2Z307 99 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 SIX6O95475 246 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 ZNF137PP52743 207 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 EDDM3BP56851 147 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 C6orf52Q5T4I8 152 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 C8orf59Q8N0T1 100 aaPredicted RBP0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 C12orf57Q99622 126 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 V9GYV3 84 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 KDM6BO15054 1643 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 ESPL1Q14674 2120 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 NRKQ7Z2Y5 1582 aa0.49□□□□□ -2.33
GTF3C3-209ENST00000466862 MAP2P11137 1827 aaKnown RBP0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 ARFGEF1Q9Y6D6 1849 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 C20orf202A1L168 122 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 C10orf128Q5T292 105 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 GTF2H5Q6ZYL4 71 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 C5orf38Q86SI9 138 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 C14orf144Q96I85 54 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 Q96NJ1 140 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 AQP10Q96PS8 301 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 TCEAL7Q9BRU2 100 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 IER3IP1Q9Y5U9 82 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 LRRC37A3O60309 1634 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 SHROOM2Q13796 1616 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 MUC5ACP98088 5654 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 PARP14Q460N5 1801 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 PATJQ8NI35 1801 aa0.48□□□□□ -2.33
GTF3C3-209ENST00000466862 PPIP5K1Q6PFW1 1433 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 TNS1Q9HBL0 1735 aaKnown RBP0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 TRGV1A0A0A0MS02 117 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 A0A0D9SG42 100 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 F2Z2F3 143 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 IFITM1P13164 125 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 ACYP2P14621 99 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 PRB3Q04118 309 aaPredicted RBP0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 COMMD6Q7Z4G1 85 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 SVBPQ8N300 66 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 TTC9CQ8N5M4 171 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 TSLPQ969D9 159 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 SPANXDQ9BXN6 97 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 LINC00474Q9P2X8 69 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 DOCK1Q14185 1865 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 LOC285556D6RIA3 1793 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 SIPA1L3O60292 1781 aaPredicted RBP0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 PXDNQ92626 1479 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 NOTCH1P46531 2555 aa0.47□□□□□ -2.33
GTF3C3-209ENST00000466862 KIAA0100Q14667 2235 aaKnown RBP0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 CC2D2AQ9P2K1 1620 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 FBN2P35556 2912 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 TRAV1-2A0A0B4J238 106 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 UBE2L5PA0A1B0GUS4 154 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 FAM24AA6NFZ4 105 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 SSSCA1O60232 199 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 PPP1R17O96001 155 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 RBP2P50120 134 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 UBE2L3P68036 154 aaKnown RBP0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 HSD52Q0P140 79 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 WFDC6Q9BQY6 131 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 CYP4F30PQ9H0H9 118 aa0.46□□□□□ -2.34
GTF3C3-209ENST00000466862 DPH3P1Q9H4G8 78 aa0.46□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms