RNA–Protein interactions for RNA: ENST00000466732.2

VPS13D-203, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 377 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-203ENST00000466732 XCL1P47992 114 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 RBMY1FQ15415 496 aaKnown RBP2.2□□□□□ -2.06
VPS13D-203ENST00000466732 KISS1Q15726 138 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 NSUN5P1Q3KNT7 163 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 GDF5OSQ5U4N7 250 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 Q6JHZ5 121 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 LYPD5Q6UWN5 251 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 C2orf82Q6UX34 121 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 C7orf65Q6ZTY9 151 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 LYZL2Q7Z4W2 148 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 LINC00474Q9P2X8 69 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 XCL2Q9UBD3 114 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 PCNX2A6NKB5 2137 aa2.2□□□□□ -2.06
VPS13D-203ENST00000466732 COL4A1P02462 1669 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 IGLV4-60A0A075B6I1 120 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV2D-26A0A0A0MRZ7 120 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.19□□□□□ -2.06
VPS13D-203ENST00000466732 TRAV13-2A0A0B4J235 113 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 IGHV1OR15-9A0A0B4J2B8 117 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 CPSF4LA6NMK7 179 aaKnown RBP2.19□□□□□ -2.06
VPS13D-203ENST00000466732 LOC730098B7Z3J9 87 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 FSTL3O95633 263 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1D-33P01593 117 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1-33P01594 117 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 IL9P15248 144 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 ZNF22P17026 224 aaPredicted RBP2.19□□□□□ -2.06
VPS13D-203ENST00000466732 LINC00313P59037 77 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 KLKP1Q107X0 134 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 C16orf47Q6ZP98 133 aaPredicted RBP2.19□□□□□ -2.06
VPS13D-203ENST00000466732 FAM223AQ8IWN6 122 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 DEFB106AQ8N104 65 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 LINC00337Q8N6G1 96 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 DAND5Q8N907 189 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 Q96M85 177 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 ZNF714Q96N38 554 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 NABP2Q9BQ15 211 aa2.19□□□□□ -2.06
VPS13D-203ENST00000466732 COL4A2P08572 1712 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 IGHV3OR16-13A0A075B7E8 117 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1D-8A0A087WSZ0 117 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 IGHV3OR16-9A0A0B4J2B5 98 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 LOC389332A0A1B0GUA5 103 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 FAM223BA6NKX1 122 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1-5P01602 117 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 IGLV3-25P01717 112 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 HMGA1P17096 107 aaKnown RBP2.18□□□□□ -2.06
VPS13D-203ENST00000466732 FUSP35637 526 aaKnown RBP eCLIP2.18□□□□□ -2.06
VPS13D-203ENST00000466732 UBE2AP49459 152 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 BLCAPP62952 87 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 CIRBPQ14011 172 aaKnown RBP2.18□□□□□ -2.06
VPS13D-203ENST00000466732 RHOHQ15669 191 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 Q1T7F1 81 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 ESRGQ1W209 222 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 GUSBP11Q6P575 273 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 LYPD6Q86Y78 171 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 SLC25A29Q8N8R3 303 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 SMCR5Q8TEV8 140 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 DIRC1Q969H9 104 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 TTTY10Q9BZA0 68 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 PROK2Q9HC23 129 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 MRPL35Q9NZE8 188 aaKnown RBP2.18□□□□□ -2.06
VPS13D-203ENST00000466732 TAC3Q9UHF0 121 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 PRO1854Q9UHT4 67 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 TMEM14AQ9Y6G1 99 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 COL4A6Q14031 1691 aa2.18□□□□□ -2.06
VPS13D-203ENST00000466732 FREM3P0C091 2139 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1D-17A0A075B6S4 117 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 TRAV7A0A075B6U4 112 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1D-13A0A0B4J2D9 117 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1-9A0A0C4DH69 117 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 TRBV30A0A0K0K1B3 111 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 TMEM14DPA8MWL7 114 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 E7EQL1 145 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 BUB1B-PAK6H3BSN5 160 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 K7EMI3 77 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 HMGN4O00479 90 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 HMGN2P05204 90 aaKnown RBP2.17□□□□□ -2.06
VPS13D-203ENST00000466732 IGKV1-13P0DP09 117 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 PRR3P79522 188 aaKnown RBP2.17□□□□□ -2.06
VPS13D-203ENST00000466732 KIAA0087Q14695 138 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 FXYD3Q14802 87 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 PLGLAQ15195 96 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 S100A7L2Q5SY68 101 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 ATP11AUNQ6ZP68 121 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 Q6ZR03 302 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 ZNF818PQ6ZRF7 136 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 GPHB5Q86YW7 130 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 C20orf197Q8N268 126 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 C11orf72Q8NBR9 251 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 WFDC5Q8TCV5 224 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 PSENENQ9NZ42 101 aa2.17□□□□□ -2.06
VPS13D-203ENST00000466732 CABIN1Q9Y6J0 2220 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 TMEM30CPA0ZSE6 113 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 A6NN06 94 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 IGLV2-8P01709 118 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 TRBV12-3P01733 135 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 IGHV3-33P01772 117 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 PIRTP0C851 137 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 CHTF8P0CG12 524 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 CCL4P13236 92 aa2.16□□□□□ -2.06
VPS13D-203ENST00000466732 S100A4P26447 101 aaKnown RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms