RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 M0R2N4 97 aa6.84□□□□□ -1.31
RTFDC1-205ENST00000466260 BTF3P20290 206 aaKnown RBP6.84□□□□□ -1.31
RTFDC1-205ENST00000466260 KRTDAPP60985 99 aa6.84□□□□□ -1.31
RTFDC1-205ENST00000466260 LINC00479Q96M42 142 aa6.84□□□□□ -1.31
RTFDC1-205ENST00000466260 LINC00467Q9BRT7 94 aa6.84□□□□□ -1.31
RTFDC1-205ENST00000466260 MDFICQ9P1T7 246 aa6.84□□□□□ -1.31
RTFDC1-205ENST00000466260 TRGV11A0A075B6L2 103 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 TRAV26-1A0A087WT03 109 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 GNRH2O43555 120 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 SPINK4O60575 86 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 CAMPP49913 170 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 ZNF80P51504 273 aaPredicted RBP6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 DAZ2Q13117 558 aaKnown RBP6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 SLAQ13239 276 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 LINC00612Q8N6U2 182 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 C15orf53Q8NAA6 179 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 UQCR10Q9UDW1 63 aa6.83□□□□□ -1.32
RTFDC1-205ENST00000466260 HSBP1L1C9JCN9 74 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 IGLV2-11P01706 119 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 PPBPP02775 128 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 LINC00310P59036 64 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 POM121L12Q8N7R1 296 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 LINC00469Q8N7U9 141 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 PGLYRP4Q96LB8 373 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 TMEM70Q9BUB7 260 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 TMEM191AQ9H0A3 160 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 LAMTOR2Q9Y2Q5 125 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 VPS13DQ5THJ4 4388 aa6.82□□□□□ -1.32
RTFDC1-205ENST00000466260 MUC4Q99102 2169 aa6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 DNAH6Q9C0G6 4158 aa6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 F2Z2F3 143 aa6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 LINC00614P0C842 121 aa6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 NTF3P20783 257 aa6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 KIAA1644Q3SXP7 199 aa6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 RNASEKQ6P5S7 137 aaKnown RBP6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 MAP1LC3CQ9BXW4 147 aa6.81□□□□□ -1.32
RTFDC1-205ENST00000466260 TRAV9-2A0A087WT02 112 aa6.8□□□□□ -1.32
RTFDC1-205ENST00000466260 NUPR1O60356 82 aa6.8□□□□□ -1.32
RTFDC1-205ENST00000466260 LEPROTL1O95214 131 aa6.8□□□□□ -1.32
RTFDC1-205ENST00000466260 SMIM15Q7Z3B0 74 aa6.8□□□□□ -1.32
RTFDC1-205ENST00000466260 NIT1Q86X76 327 aa6.8□□□□□ -1.32
RTFDC1-205ENST00000466260 GTSF1Q8WW33 167 aa6.8□□□□□ -1.32
RTFDC1-205ENST00000466260 ST20Q9HBF5 79 aa6.8□□□□□ -1.32
RTFDC1-205ENST00000466260 C11orf21Q9P2W6 132 aa6.8□□□□□ -1.32
RTFDC1-205ENST00000466260 A0A096LPF7 62 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 TRGV4A0A0C4DH28 118 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 IGHV3-16A0A0C4DH30 117 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 FABP5P3A8MUU1 101 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 SPATA45Q537H7 98 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 FA2HQ7L5A8 372 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 OR10AG1Q8NH19 301 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 ZC2HC1AQ96GY0 325 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 ZNF479Q96JC4 524 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 PMCHL2Q9BQD1 86 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 SPXQ9BT56 116 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 AP5S1Q9NUS5 200 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 PAM16Q9Y3D7 125 aa6.79□□□□□ -1.32
RTFDC1-205ENST00000466260 M0R2P5 195 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 PAX4O43316 350 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 CTRLP40313 264 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 HNRNPA3P51991 378 aaKnown RBP6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 CCL18P55774 89 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 LGALS9BQ3B8N2 356 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 TDRG1Q3Y452 100 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 COL5A1-AS1Q5SY13 56 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 ORMDL3Q8N138 153 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 VSIG2Q96IQ7 327 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 MRPS16Q9Y3D3 137 aaKnown RBP6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 LINC00588Q9Y4M8 146 aa6.78□□□□□ -1.32
RTFDC1-205ENST00000466260 TMSB15BA0A087X1C1 80 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 IGHV3-73A0A0B4J1V6 119 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 SH2D1AO60880 128 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 ORM1P02763 201 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 S100A4P26447 101 aaKnown RBP6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 FHL2Q14192 279 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 SPATA12Q7Z6I5 190 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 FER1L6-AS1Q8NA97 138 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 OR4C5Q8NGB2 326 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 PRSS3P2Q8NHM4 247 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 C18orf15Q96N68 181 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 CNFNQ9BYD5 112 aa6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 EPPK1P58107 5090 aaKnown RBP6.77□□□□□ -1.33
RTFDC1-205ENST00000466260 TRAV4A0A0B4J268 109 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 IGKV3D-20A0A0C4DH25 116 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 H3BVH4 76 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 IGLC3P0DOY3 106 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 CRYBA4P53673 196 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 CACNG7P62955 275 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 FAM104BQ5XKR9 115 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 PRO0255Q9UI72 69 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 HHLA3Q9XRX5 114 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 ICOSQ9Y6W8 199 aa6.76□□□□□ -1.33
RTFDC1-205ENST00000466260 FRAS1Q86XX4 4008 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 SYS1-DBNDD2H3BUS1 97 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 ARMS2P0C7Q2 107 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 RNASE3P12724 160 aaKnown RBP6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 ASIPP42127 132 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms