RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 GAGE13Q4V321 117 aa5.31□□□□□ -1.56
CDC42BPA-210ENST00000462553 FAM74A4Q5TZK3 123 aa5.31□□□□□ -1.56
CDC42BPA-210ENST00000462553 SH2D6Q7Z4S9 175 aa5.31□□□□□ -1.56
CDC42BPA-210ENST00000462553 OR2D3Q8NGH3 330 aa5.31□□□□□ -1.56
CDC42BPA-210ENST00000462553 FAM210AQ96ND0 272 aa5.31□□□□□ -1.56
CDC42BPA-210ENST00000462553 MSRB1Q9NZV6 116 aa5.31□□□□□ -1.56
CDC42BPA-210ENST00000462553 LY96Q9Y6Y9 160 aa5.31□□□□□ -1.56
CDC42BPA-210ENST00000462553 KIF25-AS1Q9Y6Z4 181 aa5.31□□□□□ -1.56
CDC42BPA-210ENST00000462553 LRCOL1A6NCL2 159 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 GCSHP23434 173 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 LELP1Q5T871 98 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 TEX261Q6UWH6 196 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 NUDT10Q8NFP7 164 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 ATP6V0E2Q8NHE4 81 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 OCC1Q8TAD7 63 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 NUDT11Q96G61 164 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 RNASE7Q9H1E1 156 aaKnown RBP5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 GTSF1LQ9H1H1 148 aa5.3□□□□□ -1.56
CDC42BPA-210ENST00000462553 C9JQL5 133 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 P01737 135 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 SRP19P09132 144 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 CTRLP40313 264 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 RPS20P60866 119 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 UBE2D3P61077 147 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 UBE2D2P62837 147 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 LINC01556Q5JQF7 62 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 SPANXN1Q5VSR9 72 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 FER1L6-AS1Q8NA97 138 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 NEXN-AS1Q8NBZ9 246 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 OR10G8Q8NGN5 311 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 DAZAP1Q96EP5 407 aaKnown RBP5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 TMEM70Q9BUB7 260 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 BIN3Q9NQY0 253 aa5.29□□□□□ -1.56
CDC42BPA-210ENST00000462553 TRAV9-2A0A087WT02 112 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 IGHV3-38A0A0C4DH36 116 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 TRBV10-1A0A0K0K1A3 114 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 K7EP13 123 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 RAB4BP61018 213 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 SSTP61278 116 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 SRSF3P84103 164 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 ZNF56Q15929 161 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 LYZL1Q6UWQ5 148 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 FAM231DQ6ZW35 169 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 AP1S3Q96PC3 154 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 SMIM7Q9BQ49 75 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 TPPP3Q9BW30 176 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 CNFNQ9BYD5 112 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 EIF5A2Q9GZV4 153 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 RPP21Q9H633 154 aaKnown RBP5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 FAM30AQ9NZY2 134 aa5.28□□□□□ -1.56
CDC42BPA-210ENST00000462553 IGLV5-52A0A0A0MRZ9 124 aa5.27□□□□□ -1.57
CDC42BPA-210ENST00000462553 EVI2AP22794 236 aa5.27□□□□□ -1.57
CDC42BPA-210ENST00000462553 CEBPGP53567 150 aa5.27□□□□□ -1.57
CDC42BPA-210ENST00000462553 CACNG7P62955 275 aa5.27□□□□□ -1.57
CDC42BPA-210ENST00000462553 OR10J3Q5JRS4 329 aa5.27□□□□□ -1.57
CDC42BPA-210ENST00000462553 LINC01551Q86U37 167 aa5.27□□□□□ -1.57
CDC42BPA-210ENST00000462553 GTSF1Q8WW33 167 aa5.27□□□□□ -1.57
CDC42BPA-210ENST00000462553 KRTAP4-11Q9BYQ6 195 aa5.27□□□□□ -1.57
CDC42BPA-210ENST00000462553 TRBV7-3A0A075B6L6 115 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 TRAV8-6A0A0B4J262 113 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 XKRY2A2RUG3 117 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 F2Z2F3 143 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 IGHV3-30P01768 117 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 IGHV3-33P01772 117 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 IGHV3-30-3P0DP02 117 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 IGHV3-30-5P0DP03 117 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 RPL36AP83881 106 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 CT83Q5H943 113 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 SUMO4Q6EEV6 95 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 WDR73Q6P4I2 378 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 Q6ZSA8 131 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 C10orf126Q8N4M7 172 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 Q8N814 137 aa5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 NTN5Q8WTR8 489 aaPredicted RBP5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 RPL36ALQ969Q0 106 aaKnown RBP5.26□□□□□ -1.57
CDC42BPA-210ENST00000462553 ZNF727A8MUV8 499 aa5.25□□□□□ -1.57
CDC42BPA-210ENST00000462553 IBA57-AS1B1ANH7 110 aa5.25□□□□□ -1.57
CDC42BPA-210ENST00000462553 M0QY20 66 aa5.25□□□□□ -1.57
CDC42BPA-210ENST00000462553 GATCO43716 136 aaKnown RBP5.25□□□□□ -1.57
CDC42BPA-210ENST00000462553 MGPP08493 103 aa5.25□□□□□ -1.57
CDC42BPA-210ENST00000462553 NTF3P20783 257 aa5.25□□□□□ -1.57
CDC42BPA-210ENST00000462553 WFDC2Q14508 124 aa5.25□□□□□ -1.57
CDC42BPA-210ENST00000462553 TNXBP22105 4242 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 A0A087WWC5 75 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 TRGC1P0CF51 173 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 SMIM17P0DL12 118 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 FOXA3P55318 350 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 RPL23P62829 140 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 LAGE3Q14657 143 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 NTM-AS1Q6ZSK4 140 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 DAZ4Q86SG3 579 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 NIT1Q86X76 327 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 ISOC2Q96AB3 205 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 DPH3P1Q9H4G8 78 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 DAZ3Q9NR90 486 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 OSTCQ9NRP0 149 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 V9GYV3 84 aa5.24□□□□□ -1.57
CDC42BPA-210ENST00000462553 TRBV6-8A0A0A6YYG3 113 aa5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 A8MWL6 223 aa5.23□□□□□ -1.57
CDC42BPA-210ENST00000462553 KRTAP29-1A8MX34 341 aaPredicted RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms